Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
HMGA2P52926 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.21□□□□□ -2.22
HMGA2P52926 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
HMGA2P52926 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
HMGA2P52926 RNU4-33P-201ENST00000364316 85 ntBASIC1.2□□□□□ -2.22
HMGA2P52926 MIR582-201ENST00000365731 98 ntBASIC1.2□□□□□ -2.22
HMGA2P52926 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HMGA2P52926 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HMGA2P52926 AC067863.3-201ENST00000624172 122 ntBASIC1.2□□□□□ -2.22
HMGA2P52926 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMGA2P52926 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMGA2P52926 Y_RNA.125-201ENST00000363371 111 ntBASIC1.19□□□□□ -2.22
HMGA2P52926 RNU1-119P-201ENST00000391122 165 ntBASIC1.19□□□□□ -2.22
HMGA2P52926 RNU6-231P-201ENST00000517122 103 ntBASIC1.19□□□□□ -2.22
HMGA2P52926 MIR548AG1-201ENST00000579932 66 ntBASIC1.19□□□□□ -2.22
HMGA2P52926 MIR4713-201ENST00000582691 75 ntBASIC1.19□□□□□ -2.22
HMGA2P52926 AC090617.8-201ENST00000623339 167 ntBASIC1.19□□□□□ -2.22
HMGA2P52926 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGA2P52926 RNU1-141P-201ENST00000364623 158 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 RNU6-726P-201ENST00000364680 107 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 AC079140.2-201ENST00000506193 142 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 AL359821.1-201ENST00000605519 182 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 RMST_2.1-201ENST00000617263 136 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 AC244669.1-204ENST00000621564 178 ntBASIC1.18□□□□□ -2.22
HMGA2P52926 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.18□□□□□ -2.22
HMGA2P52926 SNORA9.1-201ENST00000362412 131 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 Y_RNA.174-201ENST00000363781 105 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 RNU6-1162P-201ENST00000384443 104 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 SNORD28-201ENST00000384706 75 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 MIR520F-201ENST00000384824 87 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 MIR545-201ENST00000385085 106 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 RNU6-269P-201ENST00000391077 97 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 snoU13.15-201ENST00000459407 104 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 MIR4299-201ENST00000577899 72 ntBASIC1.17□□□□□ -2.22
HMGA2P52926 Y_RNA.250-201ENST00000364542 110 ntBASIC1.16□□□□□ -2.22
HMGA2P52926 RNU6-955P-201ENST00000410497 104 ntBASIC1.16□□□□□ -2.22
HMGA2P52926 RNA5SP484-201ENST00000458857 111 ntBASIC1.16□□□□□ -2.22
HMGA2P52926 SNORD13-201ENST00000459299 104 ntBASIC1.16□□□□□ -2.22
HMGA2P52926 AC002350.1-201ENST00000490759 375 ntBASIC1.16□□□□□ -2.22
HMGA2P52926 MIR4460-201ENST00000577862 86 ntBASIC1.16□□□□□ -2.22
HMGA2P52926 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
HMGA2P52926 SNORA7.1-201ENST00000363750 139 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 Y_RNA.246-201ENST00000364495 108 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 MIR100-201ENST00000385259 80 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 MIR1827-201ENST00000408549 66 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 snoU13.9-201ENST00000458927 103 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 AC021146.9-201ENST00000512503 156 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 MIR3937-201ENST00000580135 106 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 MIR548AE1-201ENST00000583292 70 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.15□□□□□ -2.23
HMGA2P52926 SNORD18A-201ENST00000363753 72 ntBASIC1.14□□□□□ -2.23
HMGA2P52926 MIR652-201ENST00000385278 98 ntBASIC1.14□□□□□ -2.23
HMGA2P52926 RNU6-910P-201ENST00000390844 107 ntBASIC1.14□□□□□ -2.23
HMGA2P52926 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
HMGA2P52926 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HMGA2P52926 RNU6-716P-201ENST00000365621 103 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 SNORD116.2-201ENST00000391251 93 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 MIR548E-201ENST00000408287 88 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 RNA5SP47-201ENST00000517230 109 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 AC015712.3-201ENST00000559380 164 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 MIR548X-201ENST00000580069 75 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
HMGA2P52926 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGA2P52926 MIR1-1-201ENST00000362147 71 ntBASIC1.12□□□□□ -2.23
HMGA2P52926 RNU6-994P-201ENST00000410507 111 ntBASIC1.12□□□□□ -2.23
HMGA2P52926 MIR4287-201ENST00000579398 78 ntBASIC1.12□□□□□ -2.23
HMGA2P52926 MIR4639-201ENST00000584938 69 ntBASIC1.12□□□□□ -2.23
HMGA2P52926 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMGA2P52926 Y_RNA.282-201ENST00000364793 102 ntBASIC1.11□□□□□ -2.23
HMGA2P52926 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMGA2P52926 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
HMGA2P52926 RNU6-986P-201ENST00000363133 102 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 RNU6-810P-201ENST00000364001 107 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 RNU6-1065P-201ENST00000384513 106 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 SNORD116-16-201ENST00000384533 92 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 MIR30A-201ENST00000385092 71 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 U7.7-201ENST00000459276 60 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 RNU7-119P-201ENST00000459279 63 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 CYP3A54P-201ENST00000566950 75 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 MIR4490-201ENST00000582647 84 ntBASIC1.1□□□□□ -2.23
HMGA2P52926 MIR1289-2-201ENST00000408360 111 ntBASIC1.09□□□□□ -2.23
HMGA2P52926 SCARNA17.3-201ENST00000516381 125 ntBASIC1.09□□□□□ -2.23
HMGA2P52926 MIR4303-201ENST00000581299 66 ntBASIC1.09□□□□□ -2.23
HMGA2P52926 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HMGA2P52926 Y_RNA.74-201ENST00000362911 99 ntBASIC1.08□□□□□ -2.24
HMGA2P52926 RNU6-924P-201ENST00000362926 108 ntBASIC1.08□□□□□ -2.24
HMGA2P52926 RNU6-838P-201ENST00000363399 108 ntBASIC1.08□□□□□ -2.24
HMGA2P52926 SNORA63.6-201ENST00000364921 119 ntBASIC1.08□□□□□ -2.24
HMGA2P52926 SNORA15B-2-201ENST00000384058 135 ntBASIC1.08□□□□□ -2.24
HMGA2P52926 SNORA15B-1-201ENST00000384334 135 ntBASIC1.08□□□□□ -2.24
HMGA2P52926 SNORA8.2-201ENST00000384372 139 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 627 ms