Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-495P-201ENST00000362995 107 ntBASIC1.45□□□□□ -2.18
USP11P51784 SNORD113.1-201ENST00000363280 73 ntBASIC1.45□□□□□ -2.18
USP11P51784 Y_RNA.224-201ENST00000364308 111 ntBASIC1.45□□□□□ -2.18
USP11P51784 RNU6-630P-201ENST00000391258 106 ntBASIC1.45□□□□□ -2.18
USP11P51784 AC244098.3-201ENST00000424803 96 ntBASIC1.45□□□□□ -2.18
USP11P51784 AC067940.1-201ENST00000458411 300 ntBASIC1.45□□□□□ -2.18
USP11P51784 RNU6-274P-201ENST00000459566 107 ntBASIC1.45□□□□□ -2.18
USP11P51784 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
USP11P51784 NAMPTP3-201ENST00000569273 224 ntBASIC1.45□□□□□ -2.18
USP11P51784 MIR8053-201ENST00000613344 75 ntBASIC1.45□□□□□ -2.18
USP11P51784 MIR6504-201ENST00000613520 61 ntBASIC1.45□□□□□ -2.18
USP11P51784 RNU6-471P-201ENST00000383944 106 ntBASIC1.44□□□□□ -2.18
USP11P51784 RNU6-895P-201ENST00000384125 103 ntBASIC1.44□□□□□ -2.18
USP11P51784 SNORA25-201ENST00000384384 134 ntBASIC1.44□□□□□ -2.18
USP11P51784 SNORD75.2-201ENST00000408784 58 ntBASIC1.44□□□□□ -2.18
USP11P51784 MIR548O2-201ENST00000616090 70 ntBASIC1.44□□□□□ -2.18
USP11P51784 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
USP11P51784 SNORD89-201ENST00000390981 114 ntBASIC1.43□□□□□ -2.18
USP11P51784 RNU7-24P-201ENST00000458867 62 ntBASIC1.43□□□□□ -2.18
USP11P51784 RNU6-752P-201ENST00000516376 102 ntBASIC1.43□□□□□ -2.18
USP11P51784 AC067863.3-201ENST00000624172 122 ntBASIC1.43□□□□□ -2.18
USP11P51784 RNU6-54P-201ENST00000365563 107 ntBASIC1.42□□□□□ -2.18
USP11P51784 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
USP11P51784 Y_RNA.443-201ENST00000384135 111 ntBASIC1.41□□□□□ -2.18
USP11P51784 SNORD28-201ENST00000384706 75 ntBASIC1.41□□□□□ -2.18
USP11P51784 AL691482.2-201ENST00000457453 84 ntBASIC1.41□□□□□ -2.18
USP11P51784 AC244669.1-204ENST00000621564 178 ntBASIC1.41□□□□□ -2.18
USP11P51784 RNU6-1216P-201ENST00000362590 107 ntBASIC1.4□□□□□ -2.19
USP11P51784 RNA5SP117-201ENST00000365294 118 ntBASIC1.4□□□□□ -2.19
USP11P51784 RNU6-1039P-201ENST00000383931 107 ntBASIC1.4□□□□□ -2.19
USP11P51784 AC093423.1-201ENST00000440817 142 ntBASIC1.4□□□□□ -2.19
USP11P51784 RNU6-982P-201ENST00000516216 102 ntBASIC1.4□□□□□ -2.19
USP11P51784 RNU6-1110P-201ENST00000516462 101 ntBASIC1.4□□□□□ -2.19
USP11P51784 RNA5SP102-201ENST00000516865 106 ntBASIC1.4□□□□□ -2.19
USP11P51784 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
USP11P51784 SNORA25.8-201ENST00000364831 128 ntBASIC1.39□□□□□ -2.19
USP11P51784 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
USP11P51784 SNORD105-201ENST00000386910 85 ntBASIC1.39□□□□□ -2.19
USP11P51784 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
USP11P51784 SNORD41.1-201ENST00000391000 69 ntBASIC1.39□□□□□ -2.19
USP11P51784 SNORD42B-201ENST00000458893 67 ntBASIC1.39□□□□□ -2.19
USP11P51784 SNORA25.4-201ENST00000363666 124 ntBASIC1.38□□□□□ -2.19
USP11P51784 MIR203A-201ENST00000384836 110 ntBASIC1.38□□□□□ -2.19
USP11P51784 MIR9-2-201ENST00000384838 87 ntBASIC1.38□□□□□ -2.19
USP11P51784 MIR216B-201ENST00000390186 82 ntBASIC1.38□□□□□ -2.19
USP11P51784 MIR4639-201ENST00000584938 69 ntBASIC1.38□□□□□ -2.19
USP11P51784 AL109933.3-201ENST00000619095 188 ntBASIC1.38□□□□□ -2.19
USP11P51784 RNU6-1335P-201ENST00000365426 107 ntBASIC1.37□□□□□ -2.19
USP11P51784 RNU6V-201ENST00000384105 107 ntBASIC1.37□□□□□ -2.19
USP11P51784 U7.7-201ENST00000459276 60 ntBASIC1.37□□□□□ -2.19
USP11P51784 snoU13.18-201ENST00000459483 104 ntBASIC1.37□□□□□ -2.19
USP11P51784 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
USP11P51784 MIR6509-201ENST00000614603 85 ntBASIC1.37□□□□□ -2.19
USP11P51784 SNORD18A-201ENST00000363753 72 ntBASIC1.36□□□□□ -2.19
USP11P51784 RNU6-726P-201ENST00000364680 107 ntBASIC1.36□□□□□ -2.19
USP11P51784 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
USP11P51784 MIR489-201ENST00000384923 84 ntBASIC1.36□□□□□ -2.19
USP11P51784 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
USP11P51784 SNORD124-201ENST00000459577 104 ntBASIC1.36□□□□□ -2.19
USP11P51784 RNA5SP47-201ENST00000517230 109 ntBASIC1.35□□□□□ -2.19
USP11P51784 SNORA40.17-201ENST00000517256 115 ntBASIC1.35□□□□□ -2.19
USP11P51784 RNU6-135P-201ENST00000516769 101 ntBASIC1.34□□□□□ -2.19
USP11P51784 MIR3678-201ENST00000578455 94 ntBASIC1.34□□□□□ -2.19
USP11P51784 MIR3657-201ENST00000584818 117 ntBASIC1.33□□□□□ -2.2
USP11P51784 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
USP11P51784 SNORD114-22-201ENST00000365423 72 ntBASIC1.32□□□□□ -2.2
USP11P51784 MIR573-201ENST00000384964 99 ntBASIC1.32□□□□□ -2.2
USP11P51784 MT-TY-201ENST00000387409 66 ntBASIC1.32□□□□□ -2.2
USP11P51784 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
USP11P51784 MIR3612-201ENST00000579753 87 ntBASIC1.32□□□□□ -2.2
USP11P51784 MIR4511-201ENST00000582784 87 ntBASIC1.32□□□□□ -2.2
USP11P51784 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
USP11P51784 RNU6-469P-201ENST00000516253 101 ntBASIC1.31□□□□□ -2.2
USP11P51784 RNU6-716P-201ENST00000365621 103 ntBASIC1.3□□□□□ -2.2
USP11P51784 RNU6-260P-201ENST00000384092 107 ntBASIC1.3□□□□□ -2.2
USP11P51784 RNU6-269P-201ENST00000391077 97 ntBASIC1.3□□□□□ -2.2
USP11P51784 RNU7-74P-201ENST00000459104 62 ntBASIC1.3□□□□□ -2.2
USP11P51784 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
USP11P51784 AC073869.9-201ENST00000641610 120 ntBASIC1.3□□□□□ -2.2
USP11P51784 RNU6-990P-201ENST00000364385 104 ntBASIC1.29□□□□□ -2.2
USP11P51784 RNU1-141P-201ENST00000364623 158 ntBASIC1.29□□□□□ -2.2
USP11P51784 RNU6-1187P-201ENST00000364771 110 ntBASIC1.29□□□□□ -2.2
USP11P51784 MIR4460-201ENST00000577862 86 ntBASIC1.29□□□□□ -2.2
USP11P51784 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
USP11P51784 MIR548L-201ENST00000408303 86 ntBASIC1.28□□□□□ -2.2
USP11P51784 RNA5SP220-201ENST00000516298 104 ntBASIC1.28□□□□□ -2.2
USP11P51784 RNU6-42P-201ENST00000384165 107 ntBASIC1.27□□□□□ -2.21
USP11P51784 MIR200A-201ENST00000384875 90 ntBASIC1.27□□□□□ -2.21
USP11P51784 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.27□□□□□ -2.21
USP11P51784 SCARNA16.5-201ENST00000517114 183 ntBASIC1.27□□□□□ -2.21
USP11P51784 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
USP11P51784 AC018659.1-201ENST00000551083 169 ntBASIC1.27□□□□□ -2.21
USP11P51784 AC103706.3-201ENST00000636297 85 ntBASIC1.27□□□□□ -2.21
USP11P51784 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
USP11P51784 RNU5B-6P-201ENST00000516765 68 ntBASIC1.26□□□□□ -2.21
USP11P51784 RNU6-645P-201ENST00000364649 106 ntBASIC1.25□□□□□ -2.21
USP11P51784 AC110620.1-201ENST00000416042 228 ntBASIC1.25□□□□□ -2.21
USP11P51784 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.25□□□□□ -2.21
USP11P51784 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
USP11P51784 MIR6734-201ENST00000621166 68 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 258.3 ms