Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC012531.4-201ENST00000616509 177 ntBASIC0.24□□□□□ -2.37
HCFC1P51610 TRDV1-202ENST00000621643 102 ntBASIC0.24□□□□□ -2.37
HCFC1P51610 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.24□□□□□ -2.37
HCFC1P51610 MIR519E-201ENST00000385075 84 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 MIR516B1-201ENST00000385211 90 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 RNU6-269P-201ENST00000391077 97 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 SNORA75.1-201ENST00000391130 148 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 RNU6-519P-201ENST00000410590 108 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 SNORA70.25-201ENST00000612741 95 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
HCFC1P51610 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 RNU6-132P-201ENST00000383863 107 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 Y_RNA.491-201ENST00000384417 107 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 MT-TY-201ENST00000387409 66 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 AL035461.1-201ENST00000421490 332 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
HCFC1P51610 RNY4P3-201ENST00000365254 95 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 RNU6-32P-201ENST00000383948 107 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 RNU6V-201ENST00000384105 107 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 RNU6-13P-201ENST00000384248 107 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 RNU6-12P-201ENST00000384604 107 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 RNU6-41P-201ENST00000384741 107 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 MIR4677-201ENST00000584153 80 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.22□□□□□ -2.37
HCFC1P51610 MIR6759-201ENST00000638110 65 ntBASIC0.22□□□□□ -2.37
HCFC1P51610 RNU5F-1-201ENST00000362507 117 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 MIR519C-201ENST00000385053 87 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 MIR643-201ENST00000385267 97 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 RNU7-129P-201ENST00000516128 62 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 MIR4696-201ENST00000581431 70 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 Y_RNA.220-201ENST00000364244 109 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 Y_RNA.291-201ENST00000364886 113 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 RNA5SP292-201ENST00000390974 118 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 MIR2113-201ENST00000459007 91 ntBASIC0.21□□□□□ -2.38
HCFC1P51610 Y_RNA.495-201ENST00000384435 112 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 RNU6-644P-201ENST00000391155 98 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 RNU6-782P-201ENST00000516852 104 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 MIR548AG2-201ENST00000581228 64 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 RNU6-811P-201ENST00000384069 107 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 SNORD116-22-201ENST00000384430 92 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 SNORD2-201ENST00000459163 69 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 AC069113.3-201ENST00000521019 150 ntBASIC0.2□□□□□ -2.38
HCFC1P51610 SNORA63.2-201ENST00000362603 126 ntBASIC0.19□□□□□ -2.38
HCFC1P51610 MIR329-2-201ENST00000385029 84 ntBASIC0.19□□□□□ -2.38
HCFC1P51610 RNU7-159P-201ENST00000459284 62 ntBASIC0.19□□□□□ -2.38
HCFC1P51610 MTRNR2L2-201ENST00000604882 87 ntBASIC0.19□□□□□ -2.38
HCFC1P51610 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
HCFC1P51610 RNU1-141P-201ENST00000364623 158 ntBASIC0.18□□□□□ -2.38
HCFC1P51610 RNU6-162P-201ENST00000516228 103 ntBASIC0.18□□□□□ -2.38
HCFC1P51610 AC093423.1-201ENST00000440817 142 ntBASIC0.18□□□□□ -2.38
HCFC1P51610 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
HCFC1P51610 MIR4473-201ENST00000583731 91 ntBASIC0.18□□□□□ -2.38
HCFC1P51610 AC006160.2-201ENST00000637708 154 ntBASIC0.18□□□□□ -2.38
HCFC1P51610 RNU6-640P-201ENST00000363693 105 ntBASIC0.17□□□□□ -2.38
HCFC1P51610 RNU6-1052P-201ENST00000411398 104 ntBASIC0.17□□□□□ -2.38
HCFC1P51610 AC069271.1-201ENST00000445577 156 ntBASIC0.17□□□□□ -2.38
HCFC1P51610 RNU6-719P-201ENST00000516671 104 ntBASIC0.17□□□□□ -2.38
HCFC1P51610 SNORD115-27-201ENST00000364430 82 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 AC006210.1-201ENST00000424882 111 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 RNU6-168P-201ENST00000516189 101 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 MALAT1.1-201ENST00000618249 95 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.16□□□□□ -2.38
HCFC1P51610 MIR610-201ENST00000385139 96 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 RNU6-287P-201ENST00000516230 98 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 RNU6-109P-201ENST00000516364 107 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 RNU6-184P-201ENST00000516514 107 ntBASIC0.16□□□□□ -2.38
HCFC1P51610 MIR20A-201ENST00000362279 71 ntBASIC0.15□□□□□ -2.39
HCFC1P51610 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
HCFC1P51610 SNORD114-4-201ENST00000363962 75 ntBASIC0.15□□□□□ -2.39
HCFC1P51610 Y_RNA.607-201ENST00000410597 98 ntBASIC0.15□□□□□ -2.39
HCFC1P51610 MIR4796-201ENST00000580742 81 ntBASIC0.15□□□□□ -2.39
HCFC1P51610 uc_338.10-201ENST00000621872 182 ntBASIC0.15□□□□□ -2.39
HCFC1P51610 MIR892B-201ENST00000401279 77 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 MIR548H2-201ENST00000408874 88 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 Y_RNA.609-201ENST00000410669 89 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 RNA5SP484-201ENST00000458857 111 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 SCARNA11.2-201ENST00000517183 154 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 MIR3064-201ENST00000581130 66 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 RNU4-32P-201ENST00000363404 141 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 RNU6-624P-201ENST00000363411 107 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 RNA5SP395-201ENST00000516567 118 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 MIR5589-201ENST00000579442 60 ntBASIC0.14□□□□□ -2.39
HCFC1P51610 RNU7-24P-201ENST00000458867 62 ntBASIC0.13□□□□□ -2.39
HCFC1P51610 RNA5SP227-201ENST00000516184 113 ntBASIC0.13□□□□□ -2.39
HCFC1P51610 SNORD114-9-201ENST00000364370 72 ntBASIC0.13□□□□□ -2.39
HCFC1P51610 HAR1A.1-201ENST00000459583 118 ntBASIC0.13□□□□□ -2.39
HCFC1P51610 Y_RNA.660-201ENST00000516002 120 ntBASIC0.13□□□□□ -2.39
HCFC1P51610 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.13□□□□□ -2.39
HCFC1P51610 RNA5SP128-201ENST00000365305 116 ntBASIC0.12□□□□□ -2.39
HCFC1P51610 RNY1P7-201ENST00000384743 110 ntBASIC0.12□□□□□ -2.39
HCFC1P51610 MIR548Z-201ENST00000584743 97 ntBASIC0.12□□□□□ -2.39
HCFC1P51610 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
HCFC1P51610 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
HCFC1P51610 SCARNA17.3-201ENST00000516381 125 ntBASIC0.11□□□□□ -2.39
HCFC1P51610 MIR3925-201ENST00000584674 77 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 227.8 ms