Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MIR664A-201ENST00000626086 82 ntBASIC0.8□□□□□ -2.28
THBS3P49746 MIR6767-201ENST00000637302 66 ntBASIC0.8□□□□□ -2.28
THBS3P49746 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
THBS3P49746 SNORD18A-201ENST00000363753 72 ntBASIC0.79□□□□□ -2.28
THBS3P49746 RNU6-340P-201ENST00000364005 107 ntBASIC0.79□□□□□ -2.28
THBS3P49746 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
THBS3P49746 RNA5SP255-201ENST00000516370 107 ntBASIC0.79□□□□□ -2.28
THBS3P49746 MIR3678-201ENST00000578455 94 ntBASIC0.79□□□□□ -2.28
THBS3P49746 MIR4639-201ENST00000584938 69 ntBASIC0.79□□□□□ -2.28
THBS3P49746 AC067863.3-201ENST00000624172 122 ntBASIC0.79□□□□□ -2.28
THBS3P49746 MIR1297-201ENST00000637311 77 ntBASIC0.79□□□□□ -2.28
THBS3P49746 RNU6-330P-201ENST00000363015 107 ntBASIC0.78□□□□□ -2.28
THBS3P49746 Y_RNA.258-201ENST00000364613 105 ntBASIC0.78□□□□□ -2.28
THBS3P49746 Y_RNA.545-201ENST00000384652 105 ntBASIC0.78□□□□□ -2.28
THBS3P49746 MIR519E-201ENST00000385075 84 ntBASIC0.78□□□□□ -2.28
THBS3P49746 SNORD99-201ENST00000408612 74 ntBASIC0.78□□□□□ -2.28
THBS3P49746 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
THBS3P49746 AC097510.1-201ENST00000510945 133 ntBASIC0.78□□□□□ -2.28
THBS3P49746 RNU6-135P-201ENST00000516769 101 ntBASIC0.78□□□□□ -2.28
THBS3P49746 RNU6-154P-201ENST00000384306 106 ntBASIC0.77□□□□□ -2.29
THBS3P49746 MIR617-201ENST00000385030 97 ntBASIC0.77□□□□□ -2.29
THBS3P49746 RNU6-1177P-201ENST00000391058 104 ntBASIC0.77□□□□□ -2.29
THBS3P49746 U3.27-201ENST00000391237 200 ntBASIC0.77□□□□□ -2.29
THBS3P49746 RNU2-59P-201ENST00000410482 191 ntBASIC0.77□□□□□ -2.29
THBS3P49746 AC139453.2-201ENST00000487255 133 ntBASIC0.77□□□□□ -2.29
THBS3P49746 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
THBS3P49746 RNA5SP47-201ENST00000517230 109 ntBASIC0.77□□□□□ -2.29
THBS3P49746 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
THBS3P49746 AC025627.3-201ENST00000582078 182 ntBASIC0.77□□□□□ -2.29
THBS3P49746 U6.81-201ENST00000612550 106 ntBASIC0.77□□□□□ -2.29
THBS3P49746 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
THBS3P49746 Y_RNA.36-201ENST00000362602 112 ntBASIC0.76□□□□□ -2.29
THBS3P49746 RNU6-716P-201ENST00000365621 103 ntBASIC0.76□□□□□ -2.29
THBS3P49746 Y_RNA.606-201ENST00000410579 103 ntBASIC0.76□□□□□ -2.29
THBS3P49746 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
THBS3P49746 RNU6-70P-201ENST00000516438 60 ntBASIC0.76□□□□□ -2.29
THBS3P49746 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.76□□□□□ -2.29
THBS3P49746 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
THBS3P49746 RNU6-726P-201ENST00000364680 107 ntBASIC0.75□□□□□ -2.29
THBS3P49746 SNORA8.1-201ENST00000384250 140 ntBASIC0.75□□□□□ -2.29
THBS3P49746 RNU6-411P-201ENST00000384451 107 ntBASIC0.75□□□□□ -2.29
THBS3P49746 SNORD41.1-201ENST00000391000 69 ntBASIC0.75□□□□□ -2.29
THBS3P49746 MIR548L-201ENST00000408303 86 ntBASIC0.75□□□□□ -2.29
THBS3P49746 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
THBS3P49746 RNU6-1015P-201ENST00000517121 99 ntBASIC0.75□□□□□ -2.29
THBS3P49746 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.75□□□□□ -2.29
THBS3P49746 MIR151B-201ENST00000584249 96 ntBASIC0.75□□□□□ -2.29
THBS3P49746 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
THBS3P49746 MIR6857-201ENST00000613267 93 ntBASIC0.75□□□□□ -2.29
THBS3P49746 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
THBS3P49746 MIR4773-1-201ENST00000637203 78 ntBASIC0.75□□□□□ -2.29
THBS3P49746 MIR18A-201ENST00000362310 71 ntBASIC0.74□□□□□ -2.29
THBS3P49746 RNU6-382P-201ENST00000365181 106 ntBASIC0.74□□□□□ -2.29
THBS3P49746 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
THBS3P49746 MIR532-201ENST00000385025 91 ntBASIC0.74□□□□□ -2.29
THBS3P49746 Y_RNA.681-201ENST00000516445 113 ntBASIC0.74□□□□□ -2.29
THBS3P49746 RNU6-1223P-201ENST00000517124 104 ntBASIC0.74□□□□□ -2.29
THBS3P49746 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
THBS3P49746 RNU6-681P-201ENST00000364012 104 ntBASIC0.73□□□□□ -2.29
THBS3P49746 MIR598-201ENST00000384868 97 ntBASIC0.73□□□□□ -2.29
THBS3P49746 MIR548J-201ENST00000408833 112 ntBASIC0.73□□□□□ -2.29
THBS3P49746 RNU6-687P-201ENST00000516443 89 ntBASIC0.73□□□□□ -2.29
THBS3P49746 SCARNA16.5-201ENST00000517114 183 ntBASIC0.73□□□□□ -2.29
THBS3P49746 MIR548O2-201ENST00000616090 70 ntBASIC0.73□□□□□ -2.29
THBS3P49746 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
THBS3P49746 SNORA36.1-201ENST00000363424 132 ntBASIC0.72□□□□□ -2.29
THBS3P49746 RNU6-54P-201ENST00000365563 107 ntBASIC0.72□□□□□ -2.29
THBS3P49746 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
THBS3P49746 AC022709.1-201ENST00000615967 87 ntBASIC0.72□□□□□ -2.29
THBS3P49746 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
THBS3P49746 RNY1P8-201ENST00000383970 114 ntBASIC0.71□□□□□ -2.3
THBS3P49746 RNU6V-201ENST00000384105 107 ntBASIC0.71□□□□□ -2.3
THBS3P49746 RNU6-1241P-201ENST00000384536 107 ntBASIC0.71□□□□□ -2.3
THBS3P49746 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
THBS3P49746 RNU6-269P-201ENST00000391077 97 ntBASIC0.71□□□□□ -2.3
THBS3P49746 RNU6-587P-201ENST00000391282 106 ntBASIC0.71□□□□□ -2.3
THBS3P49746 AC093423.1-201ENST00000440817 142 ntBASIC0.71□□□□□ -2.3
THBS3P49746 RNU7-74P-201ENST00000459104 62 ntBASIC0.71□□□□□ -2.3
THBS3P49746 RNU6-274P-201ENST00000459566 107 ntBASIC0.71□□□□□ -2.3
THBS3P49746 NAMPTP3-201ENST00000569273 224 ntBASIC0.71□□□□□ -2.3
THBS3P49746 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
THBS3P49746 RNU6-495P-201ENST00000362995 107 ntBASIC0.7□□□□□ -2.3
THBS3P49746 MIR216B-201ENST00000390186 82 ntBASIC0.7□□□□□ -2.3
THBS3P49746 SNORD75.2-201ENST00000408784 58 ntBASIC0.7□□□□□ -2.3
THBS3P49746 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
THBS3P49746 AC114801.3-201ENST00000510231 177 ntBASIC0.7□□□□□ -2.3
THBS3P49746 RNA5SP94-201ENST00000516917 108 ntBASIC0.7□□□□□ -2.3
THBS3P49746 MIR3973-201ENST00000579824 107 ntBASIC0.7□□□□□ -2.3
THBS3P49746 MIR3675-201ENST00000583661 73 ntBASIC0.7□□□□□ -2.3
THBS3P49746 AL353765.1-201ENST00000605514 183 ntBASIC0.7□□□□□ -2.3
THBS3P49746 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.7□□□□□ -2.3
THBS3P49746 MIR6828-201ENST00000636181 60 ntBASIC0.7□□□□□ -2.3
THBS3P49746 SNORD114-26-201ENST00000363543 72 ntBASIC0.69□□□□□ -2.3
THBS3P49746 RNA5SP325-201ENST00000363756 130 ntBASIC0.69□□□□□ -2.3
THBS3P49746 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
THBS3P49746 RNU6-788P-201ENST00000390967 104 ntBASIC0.69□□□□□ -2.3
THBS3P49746 RNU6-634P-201ENST00000459134 106 ntBASIC0.69□□□□□ -2.3
THBS3P49746 RNU6-871P-201ENST00000516122 100 ntBASIC0.69□□□□□ -2.3
THBS3P49746 RNA5SP227-201ENST00000516184 113 ntBASIC0.69□□□□□ -2.3
THBS3P49746 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms