Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.14□□□□□ -2.39
PTPN9P43378 RNU6-652P-201ENST00000365488 107 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 MT-TY-201ENST00000387409 66 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 U3.27-201ENST00000391237 200 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 HMGN2P22-201ENST00000427588 175 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 SNORA25.13-201ENST00000516395 103 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 Y_RNA.677-201ENST00000516401 85 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 RNA5SP330-201ENST00000517096 96 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 MIR4460-201ENST00000577862 86 ntBASIC0.13□□□□□ -2.39
PTPN9P43378 MIR548U-201ENST00000390728 81 ntBASIC0.12□□□□□ -2.39
PTPN9P43378 RNA5SP63-201ENST00000391225 112 ntBASIC0.12□□□□□ -2.39
PTPN9P43378 RNU6-519P-201ENST00000410590 108 ntBASIC0.12□□□□□ -2.39
PTPN9P43378 RNU7-61P-201ENST00000515897 61 ntBASIC0.12□□□□□ -2.39
PTPN9P43378 RNU6-109P-201ENST00000516364 107 ntBASIC0.12□□□□□ -2.39
PTPN9P43378 RNU6-184P-201ENST00000516514 107 ntBASIC0.12□□□□□ -2.39
PTPN9P43378 MIR4677-201ENST00000584153 80 ntBASIC0.12□□□□□ -2.39
PTPN9P43378 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
PTPN9P43378 MIR610-201ENST00000385139 96 ntBASIC0.11□□□□□ -2.39
PTPN9P43378 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
PTPN9P43378 RNU6-161P-201ENST00000363051 106 ntBASIC0.1□□□□□ -2.39
PTPN9P43378 AL035461.1-201ENST00000421490 332 ntBASIC0.1□□□□□ -2.39
PTPN9P43378 MTATP8P2-201ENST00000435212 202 ntBASIC0.1□□□□□ -2.39
PTPN9P43378 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
PTPN9P43378 MIR450A1-201ENST00000362262 91 ntBASIC0.09□□□□□ -2.4
PTPN9P43378 Y_RNA.115-201ENST00000363272 98 ntBASIC0.09□□□□□ -2.4
PTPN9P43378 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
PTPN9P43378 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
PTPN9P43378 Y_RNA.258-201ENST00000364613 105 ntBASIC0.09□□□□□ -2.4
PTPN9P43378 Y_RNA.660-201ENST00000516002 120 ntBASIC0.09□□□□□ -2.4
PTPN9P43378 RNA5SP325-201ENST00000363756 130 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 MIR593-201ENST00000384856 100 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 MIR451A-201ENST00000385059 72 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 SNORA75.1-201ENST00000391130 148 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 YWHAEP2-201ENST00000580066 112 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 MIR3064-201ENST00000581130 66 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.08□□□□□ -2.4
PTPN9P43378 MIR548O2-201ENST00000616090 70 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 AL109933.3-201ENST00000619095 188 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.08□□□□□ -2.4
PTPN9P43378 RNU6-811P-201ENST00000384069 107 ntBASIC0.07□□□□□ -2.4
PTPN9P43378 MIR106A-201ENST00000384870 81 ntBASIC0.07□□□□□ -2.4
PTPN9P43378 MIR876-201ENST00000401147 81 ntBASIC0.07□□□□□ -2.4
PTPN9P43378 AC104996.3-201ENST00000590718 94 ntBASIC0.07□□□□□ -2.4
PTPN9P43378 AP001318.4-201ENST00000616637 121 ntBASIC0.07□□□□□ -2.4
PTPN9P43378 MIRLET7F1-201ENST00000362202 87 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 RNU6-32P-201ENST00000383948 107 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 RNU6-13P-201ENST00000384248 107 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 RNU6-12P-201ENST00000384604 107 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 RNU6-41P-201ENST00000384741 107 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 MIR1197-201ENST00000408818 88 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 MIR548H2-201ENST00000408874 88 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 SNORA40.13-201ENST00000516379 120 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 MIR4473-201ENST00000583731 91 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 U7.3-201ENST00000616123 62 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
PTPN9P43378 RNU6-132P-201ENST00000383863 107 ntBASIC0.05□□□□□ -2.4
PTPN9P43378 MIR3925-201ENST00000584674 77 ntBASIC0.05□□□□□ -2.4
PTPN9P43378 uc_338.10-201ENST00000621872 182 ntBASIC0.05□□□□□ -2.4
PTPN9P43378 Y_RNA.407-201ENST00000383986 113 ntBASIC0.04□□□□□ -2.4
PTPN9P43378 Y_RNA.491-201ENST00000384417 107 ntBASIC0.04□□□□□ -2.4
PTPN9P43378 AC084368.1-201ENST00000620935 65 ntBASIC0.04□□□□□ -2.4
PTPN9P43378 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
PTPN9P43378 SNORA63.4-201ENST00000362763 126 ntBASIC0.03□□□□□ -2.4
PTPN9P43378 RNU6-147P-201ENST00000383983 107 ntBASIC0.03□□□□□ -2.4
PTPN9P43378 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
PTPN9P43378 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
PTPN9P43378 SNORA63.2-201ENST00000362603 126 ntBASIC0.02□□□□□ -2.41
PTPN9P43378 MIR145-201ENST00000384967 88 ntBASIC0.02□□□□□ -2.41
PTPN9P43378 MIR516B1-201ENST00000385211 90 ntBASIC0.02□□□□□ -2.41
PTPN9P43378 RNU5B-6P-201ENST00000516765 68 ntBASIC0.02□□□□□ -2.41
PTPN9P43378 SCARNA11.2-201ENST00000517183 154 ntBASIC0.02□□□□□ -2.41
PTPN9P43378 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
PTPN9P43378 RNA5SP257-201ENST00000363023 116 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 Y_RNA.290-201ENST00000364879 114 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 RNY4P3-201ENST00000365254 95 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 RNU6-44P-201ENST00000384045 107 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 RNA5SP163-201ENST00000410304 99 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 MIR548AE1-201ENST00000583292 70 ntBASIC0.01□□□□□ -2.41
PTPN9P43378 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
PTPN9P43378 Y_RNA.348-201ENST00000365403 103 ntBASIC0□□□□□ -2.41
PTPN9P43378 RNU6V-201ENST00000384105 107 ntBASIC0□□□□□ -2.41
PTPN9P43378 Y_RNA.609-201ENST00000410669 89 ntBASIC0□□□□□ -2.41
PTPN9P43378 AC026421.1-201ENST00000519101 163 ntBASIC0□□□□□ -2.41
PTPN9P43378 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
PTPN9P43378 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0□□□□□ -2.41
PTPN9P43378 SNORD114-29-201ENST00000364819 70 ntBASIC-0.01□□□□□ -2.41
PTPN9P43378 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.01□□□□□ -2.41
PTPN9P43378 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.01□□□□□ -2.41
PTPN9P43378 RNU6-162P-201ENST00000516228 103 ntBASIC-0.01□□□□□ -2.41
PTPN9P43378 RNU6-180P-201ENST00000516697 61 ntBASIC-0.01□□□□□ -2.41
PTPN9P43378 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
PTPN9P43378 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.01□□□□□ -2.41
PTPN9P43378 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.02□□□□□ -2.41
PTPN9P43378 RNU7-165P-201ENST00000458864 60 ntBASIC-0.02□□□□□ -2.41
PTPN9P43378 CR383656.4-201ENST00000546909 122 ntBASIC-0.02□□□□□ -2.41
PTPN9P43378 MIR148A-201ENST00000362215 68 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms