Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.25□□□□□ -2.61
SSR1P43307 RNY4P3-201ENST00000365254 95 ntBASIC-1.25□□□□□ -2.61
SSR1P43307 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.25□□□□□ -2.61
SSR1P43307 RNU6-905P-201ENST00000384434 107 ntBASIC-1.25□□□□□ -2.61
SSR1P43307 AC022137.1-201ENST00000483735 151 ntBASIC-1.25□□□□□ -2.61
SSR1P43307 SNORA81.3-201ENST00000517283 198 ntBASIC-1.25□□□□□ -2.61
SSR1P43307 MIR6086-201ENST00000638065 55 ntBASIC-1.25□□□□□ -2.61
SSR1P43307 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 SNORD116-18-201ENST00000383961 92 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 AP000533.3-201ENST00000447704 118 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 MIR4499-201ENST00000584834 69 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 MIR6854-201ENST00000614935 69 ntBASIC-1.26□□□□□ -2.61
SSR1P43307 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.27□□□□□ -2.61
SSR1P43307 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.27□□□□□ -2.61
SSR1P43307 MIR513C-201ENST00000401352 84 ntBASIC-1.27□□□□□ -2.61
SSR1P43307 AL158147.1-201ENST00000443970 75 ntBASIC-1.27□□□□□ -2.61
SSR1P43307 MIR3140-201ENST00000583685 90 ntBASIC-1.27□□□□□ -2.61
SSR1P43307 uc_338.19-201ENST00000616808 99 ntBASIC-1.27□□□□□ -2.61
SSR1P43307 RNU6-132P-201ENST00000383863 107 ntBASIC-1.28□□□□□ -2.61
SSR1P43307 RNU7-85P-201ENST00000458851 63 ntBASIC-1.28□□□□□ -2.61
SSR1P43307 MIR4536-1-201ENST00000583537 88 ntBASIC-1.28□□□□□ -2.61
SSR1P43307 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.29□□□□□ -2.62
SSR1P43307 SNORD74.6-201ENST00000364796 70 ntBASIC-1.29□□□□□ -2.62
SSR1P43307 RNU6-431P-201ENST00000383874 107 ntBASIC-1.29□□□□□ -2.62
SSR1P43307 MIR577-201ENST00000385196 96 ntBASIC-1.29□□□□□ -2.62
SSR1P43307 RNU6-65P-201ENST00000516332 98 ntBASIC-1.29□□□□□ -2.62
SSR1P43307 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.29□□□□□ -2.62
SSR1P43307 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.29□□□□□ -2.62
SSR1P43307 MIR6773-201ENST00000612812 74 ntBASIC-1.29□□□□□ -2.62
SSR1P43307 RNU6-990P-201ENST00000364385 104 ntBASIC-1.3□□□□□ -2.62
SSR1P43307 MIR147A-201ENST00000385079 72 ntBASIC-1.3□□□□□ -2.62
SSR1P43307 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.3□□□□□ -2.62
SSR1P43307 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.3□□□□□ -2.62
SSR1P43307 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.31□□□□□ -2.62
SSR1P43307 SNORD64-201ENST00000386683 67 ntBASIC-1.31□□□□□ -2.62
SSR1P43307 RNU6-337P-201ENST00000391243 106 ntBASIC-1.31□□□□□ -2.62
SSR1P43307 SCARNA18B-201ENST00000458806 135 ntBASIC-1.31□□□□□ -2.62
SSR1P43307 SNORD2-201ENST00000459163 69 ntBASIC-1.31□□□□□ -2.62
SSR1P43307 AC025166.1-201ENST00000612411 163 ntBASIC-1.31□□□□□ -2.62
SSR1P43307 snoR1.1-201ENST00000628177 80 ntBASIC-1.31□□□□□ -2.62
SSR1P43307 RNY4P6-201ENST00000363667 96 ntBASIC-1.32□□□□□ -2.62
SSR1P43307 SNORD114-4-201ENST00000363962 75 ntBASIC-1.32□□□□□ -2.62
SSR1P43307 SNORD50.2-201ENST00000365465 70 ntBASIC-1.32□□□□□ -2.62
SSR1P43307 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
SSR1P43307 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.32□□□□□ -2.62
SSR1P43307 AC140658.3-201ENST00000567603 271 ntBASIC-1.32□□□□□ -2.62
SSR1P43307 AL513043.2-201ENST00000573941 143 ntBASIC-1.32□□□□□ -2.62
SSR1P43307 MIR3613-201ENST00000579844 87 ntBASIC-1.32□□□□□ -2.62
SSR1P43307 U3.27-201ENST00000391237 200 ntBASIC-1.33□□□□□ -2.62
SSR1P43307 snoU13.19-201ENST00000459148 104 ntBASIC-1.33□□□□□ -2.62
SSR1P43307 RNU7-120P-201ENST00000459334 63 ntBASIC-1.33□□□□□ -2.62
SSR1P43307 RNU6-274P-201ENST00000459566 107 ntBASIC-1.33□□□□□ -2.62
SSR1P43307 AP001340.1-201ENST00000624405 217 ntBASIC-1.33□□□□□ -2.62
SSR1P43307 RNU6-804P-201ENST00000384286 107 ntBASIC-1.34□□□□□ -2.62
SSR1P43307 RNU6-196P-201ENST00000384315 107 ntBASIC-1.34□□□□□ -2.62
SSR1P43307 RNU6-30P-201ENST00000384561 107 ntBASIC-1.34□□□□□ -2.62
SSR1P43307 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.34□□□□□ -2.62
SSR1P43307 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.34□□□□□ -2.62
SSR1P43307 AL035470.1-201ENST00000622571 220 ntBASIC-1.34□□□□□ -2.62
SSR1P43307 MIR382-201ENST00000637119 76 ntBASIC-1.34□□□□□ -2.62
SSR1P43307 SNORD58C-201ENST00000365223 64 ntBASIC-1.35□□□□□ -2.63
SSR1P43307 RNU6-592P-201ENST00000411333 103 ntBASIC-1.35□□□□□ -2.63
SSR1P43307 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.35□□□□□ -2.63
SSR1P43307 MIR548X2-201ENST00000579776 100 ntBASIC-1.35□□□□□ -2.63
SSR1P43307 SNORA63.6-201ENST00000364921 119 ntBASIC-1.36□□□□□ -2.63
SSR1P43307 MIRLET7B-201ENST00000385140 83 ntBASIC-1.36□□□□□ -2.63
SSR1P43307 MTND3P2-201ENST00000438452 342 ntBASIC-1.36□□□□□ -2.63
SSR1P43307 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.36□□□□□ -2.63
SSR1P43307 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.37□□□□□ -2.63
SSR1P43307 MIR378F-201ENST00000578143 78 ntBASIC-1.37□□□□□ -2.63
SSR1P43307 U7.2-201ENST00000607576 63 ntBASIC-1.37□□□□□ -2.63
SSR1P43307 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.38□□□□□ -2.63
SSR1P43307 SNORD90-201ENST00000391145 111 ntBASIC-1.38□□□□□ -2.63
SSR1P43307 AC090617.8-201ENST00000623339 167 ntBASIC-1.38□□□□□ -2.63
SSR1P43307 RNU6-832P-201ENST00000363319 107 ntBASIC-1.39□□□□□ -2.63
SSR1P43307 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.39□□□□□ -2.63
SSR1P43307 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.39□□□□□ -2.63
SSR1P43307 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.39□□□□□ -2.63
SSR1P43307 MIR124-2-201ENST00000385081 109 ntBASIC-1.39□□□□□ -2.63
SSR1P43307 MIR569-201ENST00000385228 96 ntBASIC-1.39□□□□□ -2.63
SSR1P43307 SNORD18.2-201ENST00000459604 70 ntBASIC-1.39□□□□□ -2.63
SSR1P43307 RNU6-495P-201ENST00000362995 107 ntBASIC-1.4□□□□□ -2.63
SSR1P43307 SNORD115-23-201ENST00000364461 82 ntBASIC-1.4□□□□□ -2.63
SSR1P43307 RNU6-394P-201ENST00000410735 107 ntBASIC-1.4□□□□□ -2.63
SSR1P43307 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.4□□□□□ -2.63
SSR1P43307 RNA5SP470-201ENST00000516463 106 ntBASIC-1.4□□□□□ -2.63
SSR1P43307 MIR3064-201ENST00000581130 66 ntBASIC-1.4□□□□□ -2.63
SSR1P43307 SNORA63.2-201ENST00000362603 126 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 RNU6-388P-201ENST00000517012 105 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 RNU6-389P-201ENST00000517048 105 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 RNY1P9-201ENST00000532431 109 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 MIR4694-201ENST00000578534 80 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 AC103810.7-201ENST00000607821 91 ntBASIC-1.41□□□□□ -2.64
SSR1P43307 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms