Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNORD50.2-201ENST00000365465 70 ntBASIC-1.8□□□□□ -2.7
RPA3P35244 RNU7-85P-201ENST00000458851 63 ntBASIC-1.8□□□□□ -2.7
RPA3P35244 AC130289.1-201ENST00000577321 73 ntBASIC-1.8□□□□□ -2.7
RPA3P35244 RNU6-132P-201ENST00000383863 107 ntBASIC-1.81□□□□□ -2.7
RPA3P35244 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.81□□□□□ -2.7
RPA3P35244 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.82□□□□□ -2.7
RPA3P35244 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.82□□□□□ -2.7
RPA3P35244 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.82□□□□□ -2.7
RPA3P35244 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.82□□□□□ -2.7
RPA3P35244 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.82□□□□□ -2.7
RPA3P35244 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.82□□□□□ -2.7
RPA3P35244 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 RNU6-915P-201ENST00000364943 103 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 RNU6-816P-201ENST00000390914 107 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 AL445584.3-201ENST00000617173 78 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 MIR6888-201ENST00000621977 67 ntBASIC-1.83□□□□□ -2.7
RPA3P35244 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.84□□□□□ -2.7
RPA3P35244 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.84□□□□□ -2.7
RPA3P35244 RNU6-460P-201ENST00000391158 108 ntBASIC-1.84□□□□□ -2.7
RPA3P35244 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.84□□□□□ -2.7
RPA3P35244 RNU4-71P-201ENST00000516258 113 ntBASIC-1.84□□□□□ -2.7
RPA3P35244 AC022559.1-201ENST00000520905 205 ntBASIC-1.84□□□□□ -2.7
RPA3P35244 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.85□□□□□ -2.71
RPA3P35244 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.85□□□□□ -2.71
RPA3P35244 AC138207.3-201ENST00000585289 166 ntBASIC-1.85□□□□□ -2.71
RPA3P35244 SNORD75.2-201ENST00000408784 58 ntBASIC-1.86□□□□□ -2.71
RPA3P35244 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.86□□□□□ -2.71
RPA3P35244 AL513043.2-201ENST00000573941 143 ntBASIC-1.86□□□□□ -2.71
RPA3P35244 RNU4-11P-201ENST00000365287 132 ntBASIC-1.87□□□□□ -2.71
RPA3P35244 SNORA24B-201ENST00000384176 131 ntBASIC-1.87□□□□□ -2.71
RPA3P35244 MIR548F4-201ENST00000408515 105 ntBASIC-1.87□□□□□ -2.71
RPA3P35244 RNU7-197P-201ENST00000458836 62 ntBASIC-1.87□□□□□ -2.71
RPA3P35244 RNU7-24P-201ENST00000458867 62 ntBASIC-1.87□□□□□ -2.71
RPA3P35244 AC068339.1-201ENST00000526965 141 ntBASIC-1.87□□□□□ -2.71
RPA3P35244 MIR4801-201ENST00000582704 82 ntBASIC-1.87□□□□□ -2.71
RPA3P35244 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.88□□□□□ -2.71
RPA3P35244 MIR548A1-201ENST00000385041 97 ntBASIC-1.88□□□□□ -2.71
RPA3P35244 MIR548U-201ENST00000390728 81 ntBASIC-1.88□□□□□ -2.71
RPA3P35244 MIR3064-201ENST00000581130 66 ntBASIC-1.88□□□□□ -2.71
RPA3P35244 RNU4-32P-201ENST00000363404 141 ntBASIC-1.89□□□□□ -2.71
RPA3P35244 RNY4P6-201ENST00000363667 96 ntBASIC-1.89□□□□□ -2.71
RPA3P35244 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.89□□□□□ -2.71
RPA3P35244 MTCYBP6-201ENST00000441810 138 ntBASIC-1.89□□□□□ -2.71
RPA3P35244 MIR4320-201ENST00000636981 65 ntBASIC-1.89□□□□□ -2.71
RPA3P35244 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 RNA5SP331-201ENST00000364986 107 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 MIR577-201ENST00000385196 96 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 RNU6-781P-201ENST00000516377 101 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 AC026421.1-201ENST00000519101 163 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 AC104996.3-201ENST00000590718 94 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 AC132825.6-201ENST00000638861 357 ntBASIC-1.91□□□□□ -2.72
RPA3P35244 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.92□□□□□ -2.72
RPA3P35244 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.92□□□□□ -2.72
RPA3P35244 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.92□□□□□ -2.72
RPA3P35244 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.92□□□□□ -2.72
RPA3P35244 RNU6-924P-201ENST00000362926 108 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 RNU6-746P-201ENST00000384112 109 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 MIR1255B2-201ENST00000408618 67 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 snoU13.17-201ENST00000458802 104 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 RNA5SP147-201ENST00000516493 109 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 RNU6-111P-201ENST00000517179 105 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 MIR3128-201ENST00000581957 66 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 AC141273.2-201ENST00000618989 130 ntBASIC-1.93□□□□□ -2.72
RPA3P35244 SNORA33.1-201ENST00000364957 130 ntBASIC-1.94□□□□□ -2.72
RPA3P35244 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.94□□□□□ -2.72
RPA3P35244 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.94□□□□□ -2.72
RPA3P35244 SNORD63.1-201ENST00000516178 80 ntBASIC-1.94□□□□□ -2.72
RPA3P35244 RNU6-479P-201ENST00000516348 105 ntBASIC-1.94□□□□□ -2.72
RPA3P35244 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.95□□□□□ -2.72
RPA3P35244 RNU6-260P-201ENST00000384092 107 ntBASIC-1.95□□□□□ -2.72
RPA3P35244 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.95□□□□□ -2.72
RPA3P35244 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.95□□□□□ -2.72
RPA3P35244 HLA-S-202ENST00000425174 53 ntBASIC-1.95□□□□□ -2.72
RPA3P35244 RNU6-382P-201ENST00000365181 106 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 SNORA26.4-201ENST00000391188 123 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 RNU7-134P-201ENST00000458997 64 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 MIR4694-201ENST00000578534 80 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 AC044792.1-201ENST00000593294 196 ntBASIC-1.96□□□□□ -2.72
RPA3P35244 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.97□□□□□ -2.72
RPA3P35244 SNORD90-201ENST00000391145 111 ntBASIC-1.97□□□□□ -2.72
RPA3P35244 AL158147.1-201ENST00000443970 75 ntBASIC-1.97□□□□□ -2.72
RPA3P35244 AL117187.1-201ENST00000555482 181 ntBASIC-1.97□□□□□ -2.72
RPA3P35244 AC006254.2-201ENST00000603259 279 ntBASIC-1.97□□□□□ -2.72
RPA3P35244 AL627230.5-201ENST00000619807 58 ntBASIC-1.97□□□□□ -2.72
RPA3P35244 RNU6-832P-201ENST00000363319 107 ntBASIC-1.98□□□□□ -2.73
RPA3P35244 SNORD115-33-201ENST00000363723 82 ntBASIC-1.98□□□□□ -2.73
RPA3P35244 MIR203A-201ENST00000384836 110 ntBASIC-1.98□□□□□ -2.73
RPA3P35244 SNORD4B-201ENST00000459083 72 ntBASIC-1.98□□□□□ -2.73
RPA3P35244 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.98□□□□□ -2.73
RPA3P35244 CYP3A54P-201ENST00000566950 75 ntBASIC-1.98□□□□□ -2.73
RPA3P35244 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.99□□□□□ -2.73
RPA3P35244 RNU6-151P-201ENST00000364158 107 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms