Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SNORA24B-201ENST00000384176 131 ntBASIC0.62□□□□□ -2.31
HOXA11P31270 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HOXA11P31270 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
HOXA11P31270 RNU6-557P-201ENST00000516842 110 ntBASIC0.62□□□□□ -2.31
HOXA11P31270 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
HOXA11P31270 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.62□□□□□ -2.31
HOXA11P31270 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.62□□□□□ -2.31
HOXA11P31270 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.62□□□□□ -2.31
HOXA11P31270 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
HOXA11P31270 RNU6-787P-201ENST00000384032 107 ntBASIC0.61□□□□□ -2.31
HOXA11P31270 MIR519E-201ENST00000385075 84 ntBASIC0.61□□□□□ -2.31
HOXA11P31270 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
HOXA11P31270 MIR216B-201ENST00000390186 82 ntBASIC0.61□□□□□ -2.31
HOXA11P31270 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
HOXA11P31270 SNORA63.2-201ENST00000362603 126 ntBASIC0.6□□□□□ -2.31
HOXA11P31270 Y_RNA.219-201ENST00000364232 113 ntBASIC0.6□□□□□ -2.31
HOXA11P31270 RNA5SP173-201ENST00000364857 136 ntBASIC0.6□□□□□ -2.31
HOXA11P31270 RNU6-242P-201ENST00000384359 107 ntBASIC0.6□□□□□ -2.31
HOXA11P31270 SNORA8.2-201ENST00000384372 139 ntBASIC0.6□□□□□ -2.31
HOXA11P31270 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.6□□□□□ -2.31
HOXA11P31270 RNA5SP268-201ENST00000516828 124 ntBASIC0.6□□□□□ -2.31
HOXA11P31270 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
HOXA11P31270 SNORD114-26-201ENST00000363543 72 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 RNU6-1051P-201ENST00000365471 102 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 SNORA36.2-201ENST00000384004 127 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 FGF7P7-201ENST00000514120 227 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 RNA5SP395-201ENST00000516567 118 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 RNA5SP480-201ENST00000516840 109 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 MIR7107-201ENST00000611489 80 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.59□□□□□ -2.31
HOXA11P31270 MIR3202-2-201ENST00000635980 79 ntBASIC0.59□□□□□ -2.31
HOXA11P31270 RNA5SP517-201ENST00000364724 117 ntBASIC0.58□□□□□ -2.32
HOXA11P31270 MIR451A-201ENST00000385059 72 ntBASIC0.58□□□□□ -2.32
HOXA11P31270 SNORD90-201ENST00000391145 111 ntBASIC0.58□□□□□ -2.32
HOXA11P31270 Y_RNA.660-201ENST00000516002 120 ntBASIC0.58□□□□□ -2.32
HOXA11P31270 RNU6-315P-201ENST00000362666 107 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 SNORD118-201ENST00000363593 134 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 Y_RNA.316-201ENST00000365118 111 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 RNY4P3-201ENST00000365254 95 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 RNU6-269P-201ENST00000391077 97 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 RN7SL793P-201ENST00000583259 296 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 MIR548O2-201ENST00000616090 70 ntBASIC0.57□□□□□ -2.32
HOXA11P31270 RNU6-573P-201ENST00000383938 106 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 MIR216A-201ENST00000385063 110 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 RNU6-848P-201ENST00000515948 107 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 RNU6-617P-201ENST00000516147 107 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 RNU6-473P-201ENST00000516164 107 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 RNA5SP227-201ENST00000516184 113 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 RNU6-1049P-201ENST00000516414 107 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 MIR1245B-201ENST00000636115 69 ntBASIC0.56□□□□□ -2.32
HOXA11P31270 Y_RNA.264-201ENST00000364665 102 ntBASIC0.55□□□□□ -2.32
HOXA11P31270 Y_RNA.685-201ENST00000516532 108 ntBASIC0.55□□□□□ -2.32
HOXA11P31270 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
HOXA11P31270 RNU1-29P-201ENST00000606574 126 ntBASIC0.55□□□□□ -2.32
HOXA11P31270 AC073869.9-201ENST00000641610 120 ntBASIC0.55□□□□□ -2.32
HOXA11P31270 RNU6-478P-201ENST00000363904 110 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 RNU1-141P-201ENST00000364623 158 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 RNU6-716P-201ENST00000365621 103 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 MT-TY-201ENST00000387409 66 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 RNU6-129P-201ENST00000391022 107 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 RNU2-59P-201ENST00000410482 191 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 RNU6-1057P-201ENST00000517162 102 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 MIR3140-201ENST00000583685 90 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
HOXA11P31270 MIRLET7A1-201ENST00000362295 80 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 RNU5F-1-201ENST00000362507 117 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 MIR518A1-201ENST00000385068 85 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
HOXA11P31270 SNORD78.1-201ENST00000390866 65 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 SNORD77.2-201ENST00000391045 68 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 RNU6-1275P-201ENST00000391087 107 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 MIR548L-201ENST00000408303 86 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 Y_RNA.606-201ENST00000410579 103 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 snoU13.17-201ENST00000458802 104 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 MIR5706-201ENST00000579841 80 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 SNORA25.18-201ENST00000607153 114 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
HOXA11P31270 Y_RNA.36-201ENST00000362602 112 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 RNU6-228P-201ENST00000362700 106 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 RNU6-279P-201ENST00000391297 101 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 AL450471.1-201ENST00000447509 127 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 RNU7-24P-201ENST00000458867 62 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 MIR4712-201ENST00000583750 82 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 AC069503.3-201ENST00000618674 145 ntBASIC0.52□□□□□ -2.33
HOXA11P31270 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
HOXA11P31270 Y_RNA.94-201ENST00000363068 106 ntBASIC0.51□□□□□ -2.33
HOXA11P31270 RNU6-686P-201ENST00000364839 107 ntBASIC0.51□□□□□ -2.33
HOXA11P31270 Y_RNA.437-201ENST00000384113 113 ntBASIC0.51□□□□□ -2.33
HOXA11P31270 AC097510.1-201ENST00000510945 133 ntBASIC0.51□□□□□ -2.33
HOXA11P31270 RNU6-863P-201ENST00000515989 104 ntBASIC0.51□□□□□ -2.33
HOXA11P31270 U6.81-201ENST00000612550 106 ntBASIC0.51□□□□□ -2.33
HOXA11P31270 RNU6-208P-201ENST00000362431 107 ntBASIC0.5□□□□□ -2.33
HOXA11P31270 Y_RNA.313-201ENST00000365095 103 ntBASIC0.5□□□□□ -2.33
HOXA11P31270 RNU6-652P-201ENST00000365488 107 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms