Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 RNU6-905P-201ENST00000384434 107 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 RNU6-816P-201ENST00000390914 107 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 FGF7P7-201ENST00000514120 227 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 SCARNA17-201ENST00000516183 144 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 RNU6-719P-201ENST00000516671 104 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 snoR1.1-201ENST00000628177 80 ntBASIC-1.09□□□□□ -2.58
SLC6A1P30531 RNU6-151P-201ENST00000364158 107 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 SNORD74.6-201ENST00000364796 70 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 RNA5SP331-201ENST00000364986 107 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 MIRLET7B-201ENST00000385140 83 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.1□□□□□ -2.59
SLC6A1P30531 SNORD115-23-201ENST00000364461 82 ntBASIC-1.11□□□□□ -2.59
SLC6A1P30531 SNORA63.6-201ENST00000364921 119 ntBASIC-1.11□□□□□ -2.59
SLC6A1P30531 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.11□□□□□ -2.59
SLC6A1P30531 RNU6-65P-201ENST00000516332 98 ntBASIC-1.11□□□□□ -2.59
SLC6A1P30531 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.11□□□□□ -2.59
SLC6A1P30531 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 SNORD50.2-201ENST00000365465 70 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 RNU6-337P-201ENST00000391243 106 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 RNU6-861P-201ENST00000516745 106 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 MIR4536-1-201ENST00000583537 88 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 MIR4499-201ENST00000584834 69 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 uc_338.19-201ENST00000616808 99 ntBASIC-1.12□□□□□ -2.59
SLC6A1P30531 SNORA63-201ENST00000363450 132 ntBASIC-1.13□□□□□ -2.59
SLC6A1P30531 RNY4P6-201ENST00000363667 96 ntBASIC-1.13□□□□□ -2.59
SLC6A1P30531 AL158147.1-201ENST00000443970 75 ntBASIC-1.13□□□□□ -2.59
SLC6A1P30531 RNU7-85P-201ENST00000458851 63 ntBASIC-1.13□□□□□ -2.59
SLC6A1P30531 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.13□□□□□ -2.59
SLC6A1P30531 AP001340.1-201ENST00000624405 217 ntBASIC-1.13□□□□□ -2.59
SLC6A1P30531 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.14□□□□□ -2.59
SLC6A1P30531 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.14□□□□□ -2.59
SLC6A1P30531 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.14□□□□□ -2.59
SLC6A1P30531 MIR587-201ENST00000384845 96 ntBASIC-1.14□□□□□ -2.59
SLC6A1P30531 MIR577-201ENST00000385196 96 ntBASIC-1.14□□□□□ -2.59
SLC6A1P30531 MIR513C-201ENST00000401352 84 ntBASIC-1.14□□□□□ -2.59
SLC6A1P30531 RNU6-682P-201ENST00000363843 106 ntBASIC-1.15□□□□□ -2.59
SLC6A1P30531 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.15□□□□□ -2.59
SLC6A1P30531 RNU6-132P-201ENST00000383863 107 ntBASIC-1.15□□□□□ -2.59
SLC6A1P30531 AL118496.2-201ENST00000448300 230 ntBASIC-1.15□□□□□ -2.59
SLC6A1P30531 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.15□□□□□ -2.59
SLC6A1P30531 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.15□□□□□ -2.59
SLC6A1P30531 MIR6738-201ENST00000619620 64 ntBASIC-1.15□□□□□ -2.59
SLC6A1P30531 RNU6-495P-201ENST00000362995 107 ntBASIC-1.16□□□□□ -2.6
SLC6A1P30531 RNU6-431P-201ENST00000383874 107 ntBASIC-1.16□□□□□ -2.6
SLC6A1P30531 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.16□□□□□ -2.6
SLC6A1P30531 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.16□□□□□ -2.6
SLC6A1P30531 AL513043.2-201ENST00000573941 143 ntBASIC-1.16□□□□□ -2.6
SLC6A1P30531 MIR3140-201ENST00000583685 90 ntBASIC-1.16□□□□□ -2.6
SLC6A1P30531 SNORA63.2-201ENST00000362603 126 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 RNU6-990P-201ENST00000364385 104 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 RNU6-10P-201ENST00000384036 107 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
SLC6A1P30531 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 SNX3P1X-201ENST00000414887 175 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 RNU7-120P-201ENST00000459334 63 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 RNU6-274P-201ENST00000459566 107 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 MIR4694-201ENST00000578534 80 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 MIR4324-201ENST00000584846 72 ntBASIC-1.17□□□□□ -2.6
SLC6A1P30531 RNU4-32P-201ENST00000363404 141 ntBASIC-1.18□□□□□ -2.6
SLC6A1P30531 MIR147A-201ENST00000385079 72 ntBASIC-1.18□□□□□ -2.6
SLC6A1P30531 SNORD64-201ENST00000386683 67 ntBASIC-1.18□□□□□ -2.6
SLC6A1P30531 RNA5SP470-201ENST00000516463 106 ntBASIC-1.18□□□□□ -2.6
SLC6A1P30531 U7.2-201ENST00000607576 63 ntBASIC-1.18□□□□□ -2.6
SLC6A1P30531 AC025166.1-201ENST00000612411 163 ntBASIC-1.18□□□□□ -2.6
SLC6A1P30531 SNORD58C-201ENST00000365223 64 ntBASIC-1.19□□□□□ -2.6
SLC6A1P30531 SNORD116-18-201ENST00000383961 92 ntBASIC-1.19□□□□□ -2.6
SLC6A1P30531 SNORA24B-201ENST00000384176 131 ntBASIC-1.19□□□□□ -2.6
SLC6A1P30531 SNORD18.2-201ENST00000459604 70 ntBASIC-1.19□□□□□ -2.6
SLC6A1P30531 AC021146.9-201ENST00000512503 156 ntBASIC-1.19□□□□□ -2.6
SLC6A1P30531 MIR378F-201ENST00000578143 78 ntBASIC-1.19□□□□□ -2.6
SLC6A1P30531 MIR3064-201ENST00000581130 66 ntBASIC-1.19□□□□□ -2.6
SLC6A1P30531 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.19□□□□□ -2.6
SLC6A1P30531 RNU6-832P-201ENST00000363319 107 ntBASIC-1.21□□□□□ -2.6
SLC6A1P30531 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.21□□□□□ -2.6
SLC6A1P30531 MIR548U-201ENST00000390728 81 ntBASIC-1.21□□□□□ -2.6
SLC6A1P30531 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.21□□□□□ -2.6
SLC6A1P30531 AC140658.3-201ENST00000567603 271 ntBASIC-1.21□□□□□ -2.6
SLC6A1P30531 MIR548X2-201ENST00000579776 100 ntBASIC-1.21□□□□□ -2.6
SLC6A1P30531 MIR4503-201ENST00000582187 83 ntBASIC-1.21□□□□□ -2.6
SLC6A1P30531 SNORA62.4-201ENST00000365504 151 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 MIR124-2-201ENST00000385081 109 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 SCARNA18B-201ENST00000458806 135 ntBASIC-1.22□□□□□ -2.6
SLC6A1P30531 AC068339.1-201ENST00000526965 141 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms