Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNU6-719P-201ENST00000516671 104 ntBASIC0.5□□□□□ -2.33
VAMP1P23763 RNA5SP480-201ENST00000516840 109 ntBASIC0.49□□□□□ -2.33
VAMP1P23763 RNU6-844P-201ENST00000517175 102 ntBASIC0.49□□□□□ -2.33
VAMP1P23763 AC069503.3-201ENST00000618674 145 ntBASIC0.49□□□□□ -2.33
VAMP1P23763 MIR96-201ENST00000362288 78 ntBASIC0.48□□□□□ -2.33
VAMP1P23763 SNORD114-27-201ENST00000363766 70 ntBASIC0.48□□□□□ -2.33
VAMP1P23763 RNU6-1327P-201ENST00000365302 105 ntBASIC0.48□□□□□ -2.33
VAMP1P23763 RNA5SP292-201ENST00000390974 118 ntBASIC0.48□□□□□ -2.33
VAMP1P23763 YWHAEP2-201ENST00000580066 112 ntBASIC0.48□□□□□ -2.33
VAMP1P23763 MIR6755-201ENST00000619993 66 ntBASIC0.48□□□□□ -2.33
VAMP1P23763 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
VAMP1P23763 RNA5SP128-201ENST00000365305 116 ntBASIC0.47□□□□□ -2.33
VAMP1P23763 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
VAMP1P23763 MIR508-201ENST00000384857 115 ntBASIC0.47□□□□□ -2.33
VAMP1P23763 MIR4796-201ENST00000580742 81 ntBASIC0.47□□□□□ -2.33
VAMP1P23763 RN7SL793P-201ENST00000583259 296 ntBASIC0.47□□□□□ -2.33
VAMP1P23763 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
VAMP1P23763 RNU5F-1-201ENST00000362507 117 ntBASIC0.46□□□□□ -2.34
VAMP1P23763 RNU6-402P-201ENST00000410678 103 ntBASIC0.46□□□□□ -2.34
VAMP1P23763 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
VAMP1P23763 RNA5SP134-201ENST00000516492 96 ntBASIC0.46□□□□□ -2.34
VAMP1P23763 MIR4473-201ENST00000583731 91 ntBASIC0.46□□□□□ -2.34
VAMP1P23763 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
VAMP1P23763 AC010487.4-201ENST00000637027 61 ntBASIC0.46□□□□□ -2.34
VAMP1P23763 MIR7-2-201ENST00000384970 110 ntBASIC0.45□□□□□ -2.34
VAMP1P23763 RNA5SP170-201ENST00000517150 101 ntBASIC0.45□□□□□ -2.34
VAMP1P23763 IGLL4P-201ENST00000614590 133 ntBASIC0.45□□□□□ -2.34
VAMP1P23763 SNORA63.2-201ENST00000362603 126 ntBASIC0.44□□□□□ -2.34
VAMP1P23763 RNU6-1051P-201ENST00000365471 102 ntBASIC0.44□□□□□ -2.34
VAMP1P23763 RNU6-49P-201ENST00000384256 107 ntBASIC0.44□□□□□ -2.34
VAMP1P23763 MT-TY-201ENST00000387409 66 ntBASIC0.44□□□□□ -2.34
VAMP1P23763 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.44□□□□□ -2.34
VAMP1P23763 SNORD114-23-201ENST00000363536 72 ntBASIC0.43□□□□□ -2.34
VAMP1P23763 Y_RNA.540-201ENST00000384638 111 ntBASIC0.43□□□□□ -2.34
VAMP1P23763 RNU5B-6P-201ENST00000516765 68 ntBASIC0.43□□□□□ -2.34
VAMP1P23763 MIR373-201ENST00000362273 69 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 RNU6-633P-201ENST00000362612 103 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 RNU6-815P-201ENST00000384080 113 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 Y_RNA.620-201ENST00000411009 88 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 MIR5582-201ENST00000579697 68 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 MIR499B-201ENST00000636498 73 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 MIR924-201ENST00000638017 53 ntBASIC0.42□□□□□ -2.34
VAMP1P23763 RNU6-294P-201ENST00000364999 102 ntBASIC0.41□□□□□ -2.34
VAMP1P23763 RNU6V-201ENST00000384105 107 ntBASIC0.41□□□□□ -2.34
VAMP1P23763 AC093423.1-201ENST00000440817 142 ntBASIC0.41□□□□□ -2.34
VAMP1P23763 AC069113.3-201ENST00000521019 150 ntBASIC0.41□□□□□ -2.34
VAMP1P23763 uc_338.10-201ENST00000621872 182 ntBASIC0.41□□□□□ -2.34
VAMP1P23763 RNU6-652P-201ENST00000365488 107 ntBASIC0.4□□□□□ -2.35
VAMP1P23763 MIR1273G-201ENST00000577677 100 ntBASIC0.4□□□□□ -2.35
VAMP1P23763 PVT1_3.1-201ENST00000620853 95 ntBASIC0.4□□□□□ -2.35
VAMP1P23763 MIR6767-201ENST00000637302 66 ntBASIC0.4□□□□□ -2.35
VAMP1P23763 Y_RNA.17-201ENST00000362433 111 ntBASIC0.39□□□□□ -2.35
VAMP1P23763 RNY1P1-201ENST00000364372 112 ntBASIC0.39□□□□□ -2.35
VAMP1P23763 Y_RNA.558-201ENST00000384685 113 ntBASIC0.39□□□□□ -2.35
VAMP1P23763 Y_RNA.611-201ENST00000410682 108 ntBASIC0.38□□□□□ -2.35
VAMP1P23763 MIR3140-201ENST00000583685 90 ntBASIC0.38□□□□□ -2.35
VAMP1P23763 RNU1-29P-201ENST00000606574 126 ntBASIC0.38□□□□□ -2.35
VAMP1P23763 MIR548O2-201ENST00000616090 70 ntBASIC0.38□□□□□ -2.35
VAMP1P23763 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.38□□□□□ -2.35
VAMP1P23763 RNA5SP457-201ENST00000363657 124 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 SNORD115-27-201ENST00000364430 82 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 Y_RNA.369-201ENST00000365568 117 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 Y_RNA.407-201ENST00000383986 113 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 MIR936-201ENST00000401264 98 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 RNU6-1232P-201ENST00000516299 86 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 SNORA25.13-201ENST00000516395 103 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 RNU7-153P-201ENST00000516455 62 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 AC084368.1-201ENST00000620935 65 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 MIR4315-1-201ENST00000636800 73 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 MIR4315-2-201ENST00000640925 73 ntBASIC0.37□□□□□ -2.35
VAMP1P23763 Y_RNA.125-201ENST00000363371 111 ntBASIC0.36□□□□□ -2.35
VAMP1P23763 AC093729.1-201ENST00000513074 128 ntBASIC0.36□□□□□ -2.35
VAMP1P23763 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
VAMP1P23763 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
VAMP1P23763 RNU6-267P-201ENST00000516714 103 ntBASIC0.35□□□□□ -2.35
VAMP1P23763 MIR4714-201ENST00000580728 77 ntBASIC0.35□□□□□ -2.35
VAMP1P23763 RNU6-219P-201ENST00000364728 107 ntBASIC0.34□□□□□ -2.36
VAMP1P23763 MIR516B1-201ENST00000385211 90 ntBASIC0.34□□□□□ -2.36
VAMP1P23763 MIR643-201ENST00000385267 97 ntBASIC0.34□□□□□ -2.36
VAMP1P23763 MIR501-201ENST00000390204 84 ntBASIC0.34□□□□□ -2.36
VAMP1P23763 HMGN2P22-201ENST00000427588 175 ntBASIC0.34□□□□□ -2.36
VAMP1P23763 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
VAMP1P23763 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
VAMP1P23763 SNORD114-4-201ENST00000363962 75 ntBASIC0.33□□□□□ -2.36
VAMP1P23763 AL450471.1-201ENST00000447509 127 ntBASIC0.33□□□□□ -2.36
VAMP1P23763 MIR4711-201ENST00000578274 70 ntBASIC0.33□□□□□ -2.36
VAMP1P23763 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 MIR610-201ENST00000385139 96 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 RNU6-127P-201ENST00000390897 107 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 RNU6-1177P-201ENST00000391058 104 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 RNU6-762P-201ENST00000517107 102 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 MIR4677-201ENST00000584153 80 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 AC006254.2-201ENST00000603259 279 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 MIR548BB-201ENST00000626714 66 ntBASIC0.32□□□□□ -2.36
VAMP1P23763 RNA5SP499-201ENST00000363982 119 ntBASIC0.31□□□□□ -2.36
VAMP1P23763 Y_RNA.205-201ENST00000364128 113 ntBASIC0.31□□□□□ -2.36
VAMP1P23763 Y_RNA.437-201ENST00000384113 113 ntBASIC0.31□□□□□ -2.36
VAMP1P23763 MIR548AD-201ENST00000584780 82 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms