Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 RNA5SP395-201ENST00000516567 118 ntBASIC1.21□□□□□ -2.22
ATP2B4P23634 MIR6857-201ENST00000613267 93 ntBASIC1.21□□□□□ -2.22
ATP2B4P23634 RNU6-857P-201ENST00000515893 110 ntBASIC1.2□□□□□ -2.22
ATP2B4P23634 RNU6-638P-201ENST00000516582 104 ntBASIC1.2□□□□□ -2.22
ATP2B4P23634 MIR3140-201ENST00000583685 90 ntBASIC1.2□□□□□ -2.22
ATP2B4P23634 MIR6828-201ENST00000636181 60 ntBASIC1.2□□□□□ -2.22
ATP2B4P23634 Y_RNA.94-201ENST00000363068 106 ntBASIC1.19□□□□□ -2.22
ATP2B4P23634 RNA5SP227-201ENST00000516184 113 ntBASIC1.19□□□□□ -2.22
ATP2B4P23634 RNA5SP94-201ENST00000516917 108 ntBASIC1.19□□□□□ -2.22
ATP2B4P23634 RNU6-24P-201ENST00000384440 107 ntBASIC1.18□□□□□ -2.22
ATP2B4P23634 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
ATP2B4P23634 RNU6-1052P-201ENST00000411398 104 ntBASIC1.18□□□□□ -2.22
ATP2B4P23634 RNU6-719P-201ENST00000516671 104 ntBASIC1.18□□□□□ -2.22
ATP2B4P23634 MIR3973-201ENST00000579824 107 ntBASIC1.18□□□□□ -2.22
ATP2B4P23634 MIRLET7A1-201ENST00000362295 80 ntBASIC1.17□□□□□ -2.22
ATP2B4P23634 SNORA36.2-201ENST00000384004 127 ntBASIC1.17□□□□□ -2.22
ATP2B4P23634 MIR519E-201ENST00000385075 84 ntBASIC1.17□□□□□ -2.22
ATP2B4P23634 PVT1_3.1-201ENST00000620853 95 ntBASIC1.17□□□□□ -2.22
ATP2B4P23634 RNU6-1094P-201ENST00000362416 104 ntBASIC1.15□□□□□ -2.23
ATP2B4P23634 SNORA36.1-201ENST00000363424 132 ntBASIC1.15□□□□□ -2.23
ATP2B4P23634 snoU13.17-201ENST00000458802 104 ntBASIC1.15□□□□□ -2.23
ATP2B4P23634 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
ATP2B4P23634 RNA5SP268-201ENST00000516828 124 ntBASIC1.15□□□□□ -2.23
ATP2B4P23634 SNORA24B-201ENST00000384176 131 ntBASIC1.14□□□□□ -2.23
ATP2B4P23634 MIR140-201ENST00000385282 100 ntBASIC1.14□□□□□ -2.23
ATP2B4P23634 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.14□□□□□ -2.23
ATP2B4P23634 CYP3A137P-201ENST00000562436 69 ntBASIC1.14□□□□□ -2.23
ATP2B4P23634 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.14□□□□□ -2.23
ATP2B4P23634 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ATP2B4P23634 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.13□□□□□ -2.23
ATP2B4P23634 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
ATP2B4P23634 RNU6-110P-201ENST00000384508 104 ntBASIC1.12□□□□□ -2.23
ATP2B4P23634 MIR598-201ENST00000384868 97 ntBASIC1.12□□□□□ -2.23
ATP2B4P23634 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ATP2B4P23634 RNU2-59P-201ENST00000410482 191 ntBASIC1.12□□□□□ -2.23
ATP2B4P23634 AC097510.1-201ENST00000510945 133 ntBASIC1.12□□□□□ -2.23
ATP2B4P23634 RNA5SP480-201ENST00000516840 109 ntBASIC1.12□□□□□ -2.23
ATP2B4P23634 YWHAEP2-201ENST00000580066 112 ntBASIC1.11□□□□□ -2.23
ATP2B4P23634 YWHAEP3-201ENST00000582767 121 ntBASIC1.11□□□□□ -2.23
ATP2B4P23634 AL162376.1-201ENST00000624117 175 ntBASIC1.11□□□□□ -2.23
ATP2B4P23634 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ATP2B4P23634 Y_RNA.12-201ENST00000362393 112 ntBASIC1.1□□□□□ -2.23
ATP2B4P23634 SNORA8.2-201ENST00000384372 139 ntBASIC1.1□□□□□ -2.23
ATP2B4P23634 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ATP2B4P23634 RNU6-1177P-201ENST00000391058 104 ntBASIC1.1□□□□□ -2.23
ATP2B4P23634 RNU6-269P-201ENST00000391077 97 ntBASIC1.1□□□□□ -2.23
ATP2B4P23634 RNA5SP436-201ENST00000516020 115 ntBASIC1.1□□□□□ -2.23
ATP2B4P23634 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
ATP2B4P23634 Y_RNA.244-201ENST00000364484 109 ntBASIC1.09□□□□□ -2.23
ATP2B4P23634 RNY1P8-201ENST00000383970 114 ntBASIC1.09□□□□□ -2.23
ATP2B4P23634 RNU6-807P-201ENST00000516805 107 ntBASIC1.09□□□□□ -2.23
ATP2B4P23634 MIR7107-201ENST00000611489 80 ntBASIC1.09□□□□□ -2.23
ATP2B4P23634 MIR7-2-201ENST00000384970 110 ntBASIC1.08□□□□□ -2.24
ATP2B4P23634 RNU6-303P-201ENST00000517091 106 ntBASIC1.08□□□□□ -2.24
ATP2B4P23634 MIR548O2-201ENST00000616090 70 ntBASIC1.08□□□□□ -2.24
ATP2B4P23634 MIR1297-201ENST00000637311 77 ntBASIC1.08□□□□□ -2.24
ATP2B4P23634 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ATP2B4P23634 RNU6-681P-201ENST00000364012 104 ntBASIC1.07□□□□□ -2.24
ATP2B4P23634 AC093423.1-201ENST00000440817 142 ntBASIC1.07□□□□□ -2.24
ATP2B4P23634 PSMC1P5-201ENST00000512850 177 ntBASIC1.07□□□□□ -2.24
ATP2B4P23634 MIR4460-201ENST00000577862 86 ntBASIC1.07□□□□□ -2.24
ATP2B4P23634 AC092634.7-201ENST00000621022 103 ntBASIC1.07□□□□□ -2.24
ATP2B4P23634 AC073869.9-201ENST00000641610 120 ntBASIC1.07□□□□□ -2.24
ATP2B4P23634 SNORD114-26-201ENST00000363543 72 ntBASIC1.06□□□□□ -2.24
ATP2B4P23634 RNU1-141P-201ENST00000364623 158 ntBASIC1.06□□□□□ -2.24
ATP2B4P23634 Y_RNA.371-201ENST00000365591 113 ntBASIC1.06□□□□□ -2.24
ATP2B4P23634 U6.81-201ENST00000612550 106 ntBASIC1.05□□□□□ -2.24
ATP2B4P23634 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
ATP2B4P23634 RNU6-340P-201ENST00000364005 107 ntBASIC1.04□□□□□ -2.24
ATP2B4P23634 RNA5SP517-201ENST00000364724 117 ntBASIC1.04□□□□□ -2.24
ATP2B4P23634 Y_RNA.606-201ENST00000410579 103 ntBASIC1.04□□□□□ -2.24
ATP2B4P23634 RNU6-824P-201ENST00000363724 104 ntBASIC1.03□□□□□ -2.24
ATP2B4P23634 MT-TY-201ENST00000387409 66 ntBASIC1.03□□□□□ -2.24
ATP2B4P23634 RNA5SP484-201ENST00000458857 111 ntBASIC1.03□□□□□ -2.24
ATP2B4P23634 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
ATP2B4P23634 AL590095.2-201ENST00000604136 117 ntBASIC1.02□□□□□ -2.25
ATP2B4P23634 MIR4662A-201ENST00000637499 67 ntBASIC1.02□□□□□ -2.25
ATP2B4P23634 RNU6V-201ENST00000384105 107 ntBASIC1.01□□□□□ -2.25
ATP2B4P23634 SNORA40.8-201ENST00000411034 126 ntBASIC1.01□□□□□ -2.25
ATP2B4P23634 SNORD71-201ENST00000411292 86 ntBASIC1.01□□□□□ -2.25
ATP2B4P23634 AC145423.2-201ENST00000610631 239 ntBASIC1.01□□□□□ -2.25
ATP2B4P23634 Y_RNA.532-201ENST00000384590 113 ntBASIC1□□□□□ -2.25
ATP2B4P23634 SNORD75.2-201ENST00000408784 58 ntBASIC1□□□□□ -2.25
ATP2B4P23634 AC074348.1-201ENST00000426503 132 ntBASIC1□□□□□ -2.25
ATP2B4P23634 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
ATP2B4P23634 U7.4-201ENST00000614961 63 ntBASIC1□□□□□ -2.25
ATP2B4P23634 AC069503.3-201ENST00000618674 145 ntBASIC1□□□□□ -2.25
ATP2B4P23634 MIR4773-1-201ENST00000637203 78 ntBASIC1□□□□□ -2.25
ATP2B4P23634 RNU6-274P-201ENST00000459566 107 ntBASIC0.99□□□□□ -2.25
ATP2B4P23634 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.99□□□□□ -2.25
ATP2B4P23634 NAMPTP3-201ENST00000569273 224 ntBASIC0.99□□□□□ -2.25
ATP2B4P23634 MIR4484-201ENST00000582855 83 ntBASIC0.99□□□□□ -2.25
ATP2B4P23634 SNORA25.18-201ENST00000607153 114 ntBASIC0.99□□□□□ -2.25
ATP2B4P23634 Y_RNA.36-201ENST00000362602 112 ntBASIC0.98□□□□□ -2.25
ATP2B4P23634 RNU6-54P-201ENST00000365563 107 ntBASIC0.98□□□□□ -2.25
ATP2B4P23634 AC006210.1-201ENST00000424882 111 ntBASIC0.98□□□□□ -2.25
ATP2B4P23634 RNU7-24P-201ENST00000458867 62 ntBASIC0.98□□□□□ -2.25
ATP2B4P23634 RNU6-495P-201ENST00000362995 107 ntBASIC0.97□□□□□ -2.25
ATP2B4P23634 SNORD118-201ENST00000363593 134 ntBASIC0.97□□□□□ -2.25
ATP2B4P23634 Y_RNA.258-201ENST00000364613 105 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms