Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 Y_RNA.648-201ENST00000459455 110 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNU6-65P-201ENST00000516332 98 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 RNA5SP268-201ENST00000516828 124 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 MIR3920-201ENST00000581751 86 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 AC012531.4-201ENST00000616509 177 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 AC069503.3-201ENST00000618674 145 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.17□□□□□ -2.38
COL5A1P20908 AC090625.1-201ENST00000357130 210 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 Y_RNA.207-201ENST00000364142 106 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 Y_RNA.221-201ENST00000364248 96 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 RNU6-1229P-201ENST00000364295 107 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 RNU6-147P-201ENST00000383983 107 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 RNU6-756P-201ENST00000383997 107 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 Y_RNA.544-201ENST00000384650 113 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 RNU6-287P-201ENST00000516230 98 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 RNU1-29P-201ENST00000606574 126 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 uc_338.10-201ENST00000621872 182 ntBASIC0.16□□□□□ -2.38
COL5A1P20908 Y_RNA.125-201ENST00000363371 111 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 RNU6-1244P-201ENST00000363614 108 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 RNU6-153P-201ENST00000364422 104 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 SNORD101-201ENST00000384027 73 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 SNORA51.5-201ENST00000384126 131 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 MIR519E-201ENST00000385075 84 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 RNU6-269P-201ENST00000391077 97 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 MIR1302-5-201ENST00000408164 150 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 SNORD110-201ENST00000408189 75 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 HMGN2P22-201ENST00000427588 175 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 AC093423.1-201ENST00000440817 142 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 AC069271.1-201ENST00000445577 156 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 MIR7107-201ENST00000611489 80 ntBASIC0.15□□□□□ -2.38
COL5A1P20908 RNA5SP98-201ENST00000363158 137 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 RNA5SP403-201ENST00000363598 108 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 RNU6-813P-201ENST00000384691 107 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 RNU6-644P-201ENST00000391155 98 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 RNU6-466P-201ENST00000391224 103 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 RNU6-1052P-201ENST00000411398 104 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 RNU6-719P-201ENST00000516671 104 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 MIR4696-201ENST00000581431 70 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 MIR548AD-201ENST00000584780 82 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 U7.3-201ENST00000616123 62 ntBASIC0.15□□□□□ -2.39
COL5A1P20908 Y_RNA.283-201ENST00000364798 112 ntBASIC0.14□□□□□ -2.39
COL5A1P20908 RNU6-132P-201ENST00000383863 107 ntBASIC0.14□□□□□ -2.39
COL5A1P20908 SNORD116-22-201ENST00000384430 92 ntBASIC0.14□□□□□ -2.39
COL5A1P20908 MT-TY-201ENST00000387409 66 ntBASIC0.14□□□□□ -2.39
COL5A1P20908 MIR548U-201ENST00000390728 81 ntBASIC0.14□□□□□ -2.39
COL5A1P20908 RNA5SP266-201ENST00000410273 108 ntBASIC0.14□□□□□ -2.39
COL5A1P20908 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.14□□□□□ -2.39
COL5A1P20908 Y_RNA.491-201ENST00000384417 107 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 MIR516B1-201ENST00000385211 90 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 MIR2113-201ENST00000459007 91 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 RNU6-158P-201ENST00000517104 100 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 Y_RNA.290-201ENST00000364879 114 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 SNORD115-44-201ENST00000365391 82 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 RNU6V-201ENST00000384105 107 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 MIR501-201ENST00000390204 84 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 RNU6-519P-201ENST00000410590 108 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 RNA5SP134-201ENST00000516492 96 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 MTRNR2L2-201ENST00000604882 87 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 AC103810.7-201ENST00000607821 91 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 TRDV1-202ENST00000621643 102 ntBASIC0.13□□□□□ -2.39
COL5A1P20908 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
COL5A1P20908 Y_RNA.32-201ENST00000362589 110 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 RNU6-624P-201ENST00000363411 107 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 RNU6-32P-201ENST00000383948 107 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 RNU6-13P-201ENST00000384248 107 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 RNU6-12P-201ENST00000384604 107 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 RNU6-41P-201ENST00000384741 107 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 MIR519C-201ENST00000385053 87 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 RNA5SP292-201ENST00000390974 118 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 Y_RNA.607-201ENST00000410597 98 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 SNORD2-201ENST00000459163 69 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 RNU6-782P-201ENST00000516852 104 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 MIR548AG2-201ENST00000581228 64 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 AC104408.1-201ENST00000605241 170 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.12□□□□□ -2.39
COL5A1P20908 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 AC006160.2-201ENST00000637708 154 ntBASIC0.12□□□□□ -2.39
COL5A1P20908 SNORD114-31-201ENST00000363219 75 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 RNA5SP214-201ENST00000363378 118 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 SNORD114-4-201ENST00000363962 75 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 Y_RNA.220-201ENST00000364244 109 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 RNU1-141P-201ENST00000364623 158 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 Y_RNA.291-201ENST00000364886 113 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 MIR892B-201ENST00000401279 77 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 AC108740.1-201ENST00000498629 225 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 MIR4677-201ENST00000584153 80 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 SNORA70.25-201ENST00000612741 95 ntBASIC0.11□□□□□ -2.39
COL5A1P20908 MIR20A-201ENST00000362279 71 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 SNORD115-37-201ENST00000363768 82 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 RNU6-1131P-201ENST00000364955 107 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 RNU6-811P-201ENST00000384069 107 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 MIR451A-201ENST00000385059 72 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 MIRLET7D-201ENST00000362263 87 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 SNORD114-9-201ENST00000364370 72 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 SNORD115-27-201ENST00000364430 82 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 MIR548H2-201ENST00000408874 88 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 RNU6-935P-201ENST00000410371 100 ntBASIC0.1□□□□□ -2.39
COL5A1P20908 RNU6-109P-201ENST00000516364 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms