Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
ATP2B1P20020 AC108740.1-201ENST00000498629 225 ntBASIC0.41□□□□□ -2.34
ATP2B1P20020 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
ATP2B1P20020 RNA5SP128-201ENST00000365305 116 ntBASIC0.4□□□□□ -2.35
ATP2B1P20020 Y_RNA.609-201ENST00000410669 89 ntBASIC0.4□□□□□ -2.35
ATP2B1P20020 AC093423.1-201ENST00000440817 142 ntBASIC0.4□□□□□ -2.35
ATP2B1P20020 RNU6-168P-201ENST00000516189 101 ntBASIC0.4□□□□□ -2.35
ATP2B1P20020 AC026421.1-201ENST00000519101 163 ntBASIC0.4□□□□□ -2.35
ATP2B1P20020 AC069113.3-201ENST00000521019 150 ntBASIC0.4□□□□□ -2.35
ATP2B1P20020 MIR8087-201ENST00000612745 78 ntBASIC0.4□□□□□ -2.35
ATP2B1P20020 MIR330-201ENST00000362196 94 ntBASIC0.39□□□□□ -2.35
ATP2B1P20020 MIR216B-201ENST00000390186 82 ntBASIC0.39□□□□□ -2.35
ATP2B1P20020 RNU7-129P-201ENST00000516128 62 ntBASIC0.39□□□□□ -2.35
ATP2B1P20020 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
ATP2B1P20020 RNA5SP330-201ENST00000517096 96 ntBASIC0.39□□□□□ -2.35
ATP2B1P20020 MIR4460-201ENST00000577862 86 ntBASIC0.39□□□□□ -2.35
ATP2B1P20020 Y_RNA.30-201ENST00000362572 97 ntBASIC0.38□□□□□ -2.35
ATP2B1P20020 Y_RNA.258-201ENST00000364613 105 ntBASIC0.38□□□□□ -2.35
ATP2B1P20020 RNU6-132P-201ENST00000383863 107 ntBASIC0.38□□□□□ -2.35
ATP2B1P20020 RNU6-811P-201ENST00000384069 107 ntBASIC0.38□□□□□ -2.35
ATP2B1P20020 RNU6-1232P-201ENST00000516299 86 ntBASIC0.38□□□□□ -2.35
ATP2B1P20020 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
ATP2B1P20020 RNU6-905P-201ENST00000384434 107 ntBASIC0.37□□□□□ -2.35
ATP2B1P20020 MIR3064-201ENST00000581130 66 ntBASIC0.37□□□□□ -2.35
ATP2B1P20020 MALAT1.1-201ENST00000618249 95 ntBASIC0.37□□□□□ -2.35
ATP2B1P20020 RNA5SP457-201ENST00000363657 124 ntBASIC0.36□□□□□ -2.35
ATP2B1P20020 MIR451A-201ENST00000385059 72 ntBASIC0.36□□□□□ -2.35
ATP2B1P20020 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
ATP2B1P20020 RNA5SP89-201ENST00000410300 108 ntBASIC0.36□□□□□ -2.35
ATP2B1P20020 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
ATP2B1P20020 AC104996.3-201ENST00000590718 94 ntBASIC0.36□□□□□ -2.35
ATP2B1P20020 AC069503.3-201ENST00000618674 145 ntBASIC0.36□□□□□ -2.35
ATP2B1P20020 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.36□□□□□ -2.35
ATP2B1P20020 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.35□□□□□ -2.35
ATP2B1P20020 RNU6-640P-201ENST00000363693 105 ntBASIC0.35□□□□□ -2.35
ATP2B1P20020 MIR1197-201ENST00000408818 88 ntBASIC0.35□□□□□ -2.35
ATP2B1P20020 MIR4315-1-201ENST00000636800 73 ntBASIC0.35□□□□□ -2.35
ATP2B1P20020 MIR4315-2-201ENST00000640925 73 ntBASIC0.35□□□□□ -2.35
ATP2B1P20020 RNU4-32P-201ENST00000363404 141 ntBASIC0.34□□□□□ -2.36
ATP2B1P20020 MIR499B-201ENST00000636498 73 ntBASIC0.34□□□□□ -2.36
ATP2B1P20020 Y_RNA.491-201ENST00000384417 107 ntBASIC0.33□□□□□ -2.36
ATP2B1P20020 MT-TY-201ENST00000387409 66 ntBASIC0.33□□□□□ -2.36
ATP2B1P20020 U3.27-201ENST00000391237 200 ntBASIC0.33□□□□□ -2.36
ATP2B1P20020 YWHAEP2-201ENST00000580066 112 ntBASIC0.32□□□□□ -2.36
ATP2B1P20020 Y_RNA.374-201ENST00000365606 101 ntBASIC0.31□□□□□ -2.36
ATP2B1P20020 MIR501-201ENST00000390204 84 ntBASIC0.31□□□□□ -2.36
ATP2B1P20020 AL109933.3-201ENST00000619095 188 ntBASIC0.31□□□□□ -2.36
ATP2B1P20020 Y_RNA.125-201ENST00000363371 111 ntBASIC0.3□□□□□ -2.36
ATP2B1P20020 Y_RNA.220-201ENST00000364244 109 ntBASIC0.3□□□□□ -2.36
ATP2B1P20020 HMGN2P22-201ENST00000427588 175 ntBASIC0.3□□□□□ -2.36
ATP2B1P20020 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.3□□□□□ -2.36
ATP2B1P20020 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
ATP2B1P20020 RNA5SP292-201ENST00000390974 118 ntBASIC0.29□□□□□ -2.36
ATP2B1P20020 FGF7P7-201ENST00000514120 227 ntBASIC0.29□□□□□ -2.36
ATP2B1P20020 SNORA18.5-201ENST00000516616 101 ntBASIC0.29□□□□□ -2.36
ATP2B1P20020 MIR5093-201ENST00000583199 100 ntBASIC0.29□□□□□ -2.36
ATP2B1P20020 MIR548AD-201ENST00000584780 82 ntBASIC0.29□□□□□ -2.36
ATP2B1P20020 MIR488-201ENST00000365739 83 ntBASIC0.28□□□□□ -2.36
ATP2B1P20020 MIR1236-201ENST00000408340 102 ntBASIC0.28□□□□□ -2.36
ATP2B1P20020 RNU5B-6P-201ENST00000516765 68 ntBASIC0.28□□□□□ -2.36
ATP2B1P20020 MIR548O2-201ENST00000616090 70 ntBASIC0.28□□□□□ -2.36
ATP2B1P20020 RNU6-652P-201ENST00000365488 107 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 RNU6-1052P-201ENST00000411398 104 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 SNORA25.13-201ENST00000516395 103 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 RNU6-719P-201ENST00000516671 104 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 MIR4473-201ENST00000583731 91 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 MIR4677-201ENST00000584153 80 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 AC023932.2-201ENST00000603176 175 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
ATP2B1P20020 SNORA63.2-201ENST00000362603 126 ntBASIC0.25□□□□□ -2.37
ATP2B1P20020 SNORD116-22-201ENST00000384430 92 ntBASIC0.25□□□□□ -2.37
ATP2B1P20020 MTATP6P29-201ENST00000415057 132 ntBASIC0.25□□□□□ -2.37
ATP2B1P20020 uc_338.10-201ENST00000621872 182 ntBASIC0.25□□□□□ -2.37
ATP2B1P20020 RNY4P3-201ENST00000365254 95 ntBASIC0.24□□□□□ -2.37
ATP2B1P20020 RNU6V-201ENST00000384105 107 ntBASIC0.24□□□□□ -2.37
ATP2B1P20020 RNU6-782P-201ENST00000516852 104 ntBASIC0.24□□□□□ -2.37
ATP2B1P20020 RNU6-1051P-201ENST00000365471 102 ntBASIC0.23□□□□□ -2.37
ATP2B1P20020 MIR643-201ENST00000385267 97 ntBASIC0.23□□□□□ -2.37
ATP2B1P20020 MIR4668-201ENST00000582284 70 ntBASIC0.23□□□□□ -2.37
ATP2B1P20020 RNA5SP257-201ENST00000363023 116 ntBASIC0.22□□□□□ -2.37
ATP2B1P20020 Y_RNA.407-201ENST00000383986 113 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 RNY1P7-201ENST00000384743 110 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 MIR516B1-201ENST00000385211 90 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 MIR3140-201ENST00000583685 90 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 MIR2909-201ENST00000617113 69 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 AC084368.1-201ENST00000620935 65 ntBASIC0.21□□□□□ -2.38
ATP2B1P20020 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
ATP2B1P20020 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
ATP2B1P20020 MIR519C-201ENST00000385053 87 ntBASIC0.2□□□□□ -2.38
ATP2B1P20020 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
ATP2B1P20020 MIR4796-201ENST00000580742 81 ntBASIC0.2□□□□□ -2.38
ATP2B1P20020 RNY4P30-201ENST00000410216 95 ntBASIC0.19□□□□□ -2.38
ATP2B1P20020 Y_RNA.694-201ENST00000516677 117 ntBASIC0.19□□□□□ -2.38
ATP2B1P20020 AC104408.1-201ENST00000605241 170 ntBASIC0.19□□□□□ -2.38
ATP2B1P20020 RNU6-633P-201ENST00000362612 103 ntBASIC0.18□□□□□ -2.38
ATP2B1P20020 RNU6-1131P-201ENST00000364955 107 ntBASIC0.18□□□□□ -2.38
ATP2B1P20020 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
ATP2B1P20020 MIR3925-201ENST00000584674 77 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms