Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC006254.2-201ENST00000603259 279 ntBASIC0.6□□□□□ -2.31
ATF4P18848 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
ATF4P18848 SNORD114-26-201ENST00000363543 72 ntBASIC0.59□□□□□ -2.31
ATF4P18848 RNY1P1-201ENST00000364372 112 ntBASIC0.59□□□□□ -2.31
ATF4P18848 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
ATF4P18848 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.59□□□□□ -2.31
ATF4P18848 MIR4752-201ENST00000579672 72 ntBASIC0.59□□□□□ -2.31
ATF4P18848 MIRLET7D-201ENST00000362263 87 ntBASIC0.58□□□□□ -2.32
ATF4P18848 RNU6-675P-201ENST00000384236 104 ntBASIC0.58□□□□□ -2.32
ATF4P18848 SNORA63.2-201ENST00000362603 126 ntBASIC0.57□□□□□ -2.32
ATF4P18848 SNORD115-27-201ENST00000364430 82 ntBASIC0.57□□□□□ -2.32
ATF4P18848 AC093423.1-201ENST00000440817 142 ntBASIC0.57□□□□□ -2.32
ATF4P18848 RNU6-267P-201ENST00000516714 103 ntBASIC0.57□□□□□ -2.32
ATF4P18848 RNA5SP480-201ENST00000516840 109 ntBASIC0.57□□□□□ -2.32
ATF4P18848 PVT1_3.1-201ENST00000620853 95 ntBASIC0.57□□□□□ -2.32
ATF4P18848 AC090625.1-201ENST00000357130 210 ntBASIC0.56□□□□□ -2.32
ATF4P18848 RNU6-1051P-201ENST00000365471 102 ntBASIC0.56□□□□□ -2.32
ATF4P18848 MIR216A-201ENST00000385063 110 ntBASIC0.56□□□□□ -2.32
ATF4P18848 AC093729.1-201ENST00000513074 128 ntBASIC0.56□□□□□ -2.32
ATF4P18848 AC069503.3-201ENST00000618674 145 ntBASIC0.56□□□□□ -2.32
ATF4P18848 RNU5F-1-201ENST00000362507 117 ntBASIC0.55□□□□□ -2.32
ATF4P18848 MIR450A2-201ENST00000385022 100 ntBASIC0.55□□□□□ -2.32
ATF4P18848 Y_RNA.593-201ENST00000410292 98 ntBASIC0.55□□□□□ -2.32
ATF4P18848 RNU6-1052P-201ENST00000411398 104 ntBASIC0.55□□□□□ -2.32
ATF4P18848 RNU6-719P-201ENST00000516671 104 ntBASIC0.55□□□□□ -2.32
ATF4P18848 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
ATF4P18848 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
ATF4P18848 MT-TY-201ENST00000387409 66 ntBASIC0.54□□□□□ -2.32
ATF4P18848 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
ATF4P18848 Y_RNA.611-201ENST00000410682 108 ntBASIC0.54□□□□□ -2.32
ATF4P18848 RNU7-153P-201ENST00000516455 62 ntBASIC0.54□□□□□ -2.32
ATF4P18848 SNORA70.25-201ENST00000612741 95 ntBASIC0.54□□□□□ -2.32
ATF4P18848 MIR548BB-201ENST00000626714 66 ntBASIC0.54□□□□□ -2.32
ATF4P18848 MIR6513-201ENST00000621188 64 ntBASIC0.53□□□□□ -2.32
ATF4P18848 MIR6835-201ENST00000621552 64 ntBASIC0.53□□□□□ -2.32
ATF4P18848 Y_RNA.36-201ENST00000362602 112 ntBASIC0.52□□□□□ -2.33
ATF4P18848 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
ATF4P18848 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.52□□□□□ -2.33
ATF4P18848 MIR548O2-201ENST00000616090 70 ntBASIC0.52□□□□□ -2.33
ATF4P18848 MIR6755-201ENST00000619993 66 ntBASIC0.52□□□□□ -2.33
ATF4P18848 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.52□□□□□ -2.33
ATF4P18848 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
ATF4P18848 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
ATF4P18848 RNA5SP436-201ENST00000516020 115 ntBASIC0.51□□□□□ -2.33
ATF4P18848 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.51□□□□□ -2.33
ATF4P18848 YWHAEP2-201ENST00000580066 112 ntBASIC0.51□□□□□ -2.33
ATF4P18848 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
ATF4P18848 MIR7-2-201ENST00000384970 110 ntBASIC0.5□□□□□ -2.33
ATF4P18848 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
ATF4P18848 SNORA25.13-201ENST00000516395 103 ntBASIC0.5□□□□□ -2.33
ATF4P18848 RN7SL793P-201ENST00000583259 296 ntBASIC0.5□□□□□ -2.33
ATF4P18848 MIR3140-201ENST00000583685 90 ntBASIC0.5□□□□□ -2.33
ATF4P18848 SNORA9.1-201ENST00000362412 131 ntBASIC0.49□□□□□ -2.33
ATF4P18848 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
ATF4P18848 RNA5SP62-201ENST00000363457 110 ntBASIC0.49□□□□□ -2.33
ATF4P18848 RNU6-1327P-201ENST00000365302 105 ntBASIC0.49□□□□□ -2.33
ATF4P18848 AC073261.1-201ENST00000429409 121 ntBASIC0.49□□□□□ -2.33
ATF4P18848 RNU1-29P-201ENST00000606574 126 ntBASIC0.49□□□□□ -2.33
ATF4P18848 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
ATF4P18848 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
ATF4P18848 Y_RNA.426-201ENST00000384068 113 ntBASIC0.48□□□□□ -2.33
ATF4P18848 RNU6V-201ENST00000384105 107 ntBASIC0.48□□□□□ -2.33
ATF4P18848 RNU6-820P-201ENST00000384273 107 ntBASIC0.48□□□□□ -2.33
ATF4P18848 RNU7-129P-201ENST00000516128 62 ntBASIC0.48□□□□□ -2.33
ATF4P18848 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
ATF4P18848 RNU6-497P-201ENST00000365316 104 ntBASIC0.47□□□□□ -2.33
ATF4P18848 AC006160.2-201ENST00000637708 154 ntBASIC0.47□□□□□ -2.33
ATF4P18848 MIR494-201ENST00000349529 81 ntBASIC0.46□□□□□ -2.34
ATF4P18848 RNU5B-6P-201ENST00000516765 68 ntBASIC0.46□□□□□ -2.34
ATF4P18848 RNU6-242P-201ENST00000384359 107 ntBASIC0.45□□□□□ -2.34
ATF4P18848 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
ATF4P18848 uc_338.10-201ENST00000621872 182 ntBASIC0.45□□□□□ -2.34
ATF4P18848 AC010487.4-201ENST00000637027 61 ntBASIC0.45□□□□□ -2.34
ATF4P18848 Y_RNA.125-201ENST00000363371 111 ntBASIC0.44□□□□□ -2.34
ATF4P18848 RNU6-1177P-201ENST00000391058 104 ntBASIC0.44□□□□□ -2.34
ATF4P18848 AL450471.1-201ENST00000447509 127 ntBASIC0.44□□□□□ -2.34
ATF4P18848 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.44□□□□□ -2.34
ATF4P18848 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
ATF4P18848 MIR4473-201ENST00000583731 91 ntBASIC0.44□□□□□ -2.34
ATF4P18848 Y_RNA.407-201ENST00000383986 113 ntBASIC0.43□□□□□ -2.34
ATF4P18848 SNORD90-201ENST00000391145 111 ntBASIC0.43□□□□□ -2.34
ATF4P18848 AC140658.3-201ENST00000567603 271 ntBASIC0.43□□□□□ -2.34
ATF4P18848 MIR5588-201ENST00000581890 63 ntBASIC0.43□□□□□ -2.34
ATF4P18848 Y_RNA.73-201ENST00000362910 113 ntBASIC0.42□□□□□ -2.34
ATF4P18848 SNORD114-23-201ENST00000363536 72 ntBASIC0.42□□□□□ -2.34
ATF4P18848 SNORD114-4-201ENST00000363962 75 ntBASIC0.42□□□□□ -2.34
ATF4P18848 Y_RNA.264-201ENST00000364665 102 ntBASIC0.42□□□□□ -2.34
ATF4P18848 Y_RNA.607-201ENST00000410597 98 ntBASIC0.42□□□□□ -2.34
ATF4P18848 AC022137.1-201ENST00000483735 151 ntBASIC0.42□□□□□ -2.34
ATF4P18848 RNA5SP134-201ENST00000516492 96 ntBASIC0.42□□□□□ -2.34
ATF4P18848 AC069113.3-201ENST00000521019 150 ntBASIC0.42□□□□□ -2.34
ATF4P18848 SNORD73B-201ENST00000364394 72 ntBASIC0.41□□□□□ -2.34
ATF4P18848 RNU6-652P-201ENST00000365488 107 ntBASIC0.41□□□□□ -2.34
ATF4P18848 RNU6-815P-201ENST00000384080 113 ntBASIC0.41□□□□□ -2.34
ATF4P18848 Y_RNA.437-201ENST00000384113 113 ntBASIC0.41□□□□□ -2.34
ATF4P18848 SNORA24B-201ENST00000384176 131 ntBASIC0.41□□□□□ -2.34
ATF4P18848 SNORD77.2-201ENST00000391045 68 ntBASIC0.41□□□□□ -2.34
ATF4P18848 HMGN2P22-201ENST00000427588 175 ntBASIC0.41□□□□□ -2.34
ATF4P18848 AC097510.1-201ENST00000510945 133 ntBASIC0.41□□□□□ -2.34
ATF4P18848 RNU6-1232P-201ENST00000516299 86 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms