Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 SNORA24B-201ENST00000384176 131 ntBASIC-1.74□□□□□ -2.69
HIST1H1CP16403 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.74□□□□□ -2.69
HIST1H1CP16403 SNORA26.4-201ENST00000391188 123 ntBASIC-1.74□□□□□ -2.69
HIST1H1CP16403 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
HIST1H1CP16403 AC022028.1-201ENST00000412054 408 ntBASIC-1.74□□□□□ -2.69
HIST1H1CP16403 MTND2P23-201ENST00000422990 651 ntBASIC-1.74□□□□□ -2.69
HIST1H1CP16403 AC130289.1-201ENST00000577321 73 ntBASIC-1.74□□□□□ -2.69
HIST1H1CP16403 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.74□□□□□ -2.69
HIST1H1CP16403 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 RNU6-746P-201ENST00000384112 109 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 MIR548U-201ENST00000390728 81 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 RNU6-576P-201ENST00000390854 102 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 SNORD58.1-201ENST00000391313 66 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 HLA-S-202ENST00000425174 53 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 RNU7-85P-201ENST00000458851 63 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 SNORD63.1-201ENST00000516178 80 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 RNU6-635P-201ENST00000516651 102 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 AC026421.1-201ENST00000519101 163 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 MIR3171-201ENST00000584270 74 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 MIR6818-201ENST00000621576 65 ntBASIC-1.75□□□□□ -2.69
HIST1H1CP16403 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.76□□□□□ -2.69
HIST1H1CP16403 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.76□□□□□ -2.69
HIST1H1CP16403 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.76□□□□□ -2.69
HIST1H1CP16403 RNU6-132P-201ENST00000383863 107 ntBASIC-1.76□□□□□ -2.69
HIST1H1CP16403 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.77□□□□□ -2.69
HIST1H1CP16403 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.77□□□□□ -2.69
HIST1H1CP16403 MIR1263-201ENST00000408324 86 ntBASIC-1.77□□□□□ -2.69
HIST1H1CP16403 RNU4-61P-201ENST00000411243 107 ntBASIC-1.77□□□□□ -2.69
HIST1H1CP16403 RNA5SP461-201ENST00000516451 104 ntBASIC-1.77□□□□□ -2.69
HIST1H1CP16403 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.77□□□□□ -2.69
HIST1H1CP16403 RNU6-238P-201ENST00000363313 106 ntBASIC-1.78□□□□□ -2.69
HIST1H1CP16403 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.78□□□□□ -2.69
HIST1H1CP16403 RNA5SP266-201ENST00000410273 108 ntBASIC-1.78□□□□□ -2.69
HIST1H1CP16403 MIR3064-201ENST00000581130 66 ntBASIC-1.78□□□□□ -2.69
HIST1H1CP16403 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.79□□□□□ -2.7
HIST1H1CP16403 MIR527-201ENST00000385244 85 ntBASIC-1.79□□□□□ -2.7
HIST1H1CP16403 RNU6-816P-201ENST00000390914 107 ntBASIC-1.79□□□□□ -2.7
HIST1H1CP16403 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.79□□□□□ -2.7
HIST1H1CP16403 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.79□□□□□ -2.7
HIST1H1CP16403 MIR1255B2-201ENST00000408618 67 ntBASIC-1.79□□□□□ -2.7
HIST1H1CP16403 RNU7-134P-201ENST00000458997 64 ntBASIC-1.79□□□□□ -2.7
HIST1H1CP16403 RNY4P6-201ENST00000363667 96 ntBASIC-1.8□□□□□ -2.7
HIST1H1CP16403 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.8□□□□□ -2.7
HIST1H1CP16403 RNU6-260P-201ENST00000384092 107 ntBASIC-1.8□□□□□ -2.7
HIST1H1CP16403 RNU2-38P-201ENST00000410856 79 ntBASIC-1.8□□□□□ -2.7
HIST1H1CP16403 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.8□□□□□ -2.7
HIST1H1CP16403 AL513043.2-201ENST00000573941 143 ntBASIC-1.8□□□□□ -2.7
HIST1H1CP16403 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.8□□□□□ -2.7
HIST1H1CP16403 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 MIR8485-201ENST00000401372 91 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.81□□□□□ -2.7
HIST1H1CP16403 snoU13.17-201ENST00000458802 104 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 AC020661.2-201ENST00000560114 134 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 AC104996.3-201ENST00000590718 94 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 AC006254.2-201ENST00000603259 279 ntBASIC-1.81□□□□□ -2.7
HIST1H1CP16403 SNORA33.1-201ENST00000364957 130 ntBASIC-1.82□□□□□ -2.7
HIST1H1CP16403 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.82□□□□□ -2.7
HIST1H1CP16403 RNU6-639P-201ENST00000384074 107 ntBASIC-1.82□□□□□ -2.7
HIST1H1CP16403 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.82□□□□□ -2.7
HIST1H1CP16403 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.82□□□□□ -2.7
HIST1H1CP16403 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.82□□□□□ -2.7
HIST1H1CP16403 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.83□□□□□ -2.7
HIST1H1CP16403 SNORA33.2-201ENST00000365413 134 ntBASIC-1.83□□□□□ -2.7
HIST1H1CP16403 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.83□□□□□ -2.7
HIST1H1CP16403 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.83□□□□□ -2.7
HIST1H1CP16403 CYP3A54P-201ENST00000566950 75 ntBASIC-1.83□□□□□ -2.7
HIST1H1CP16403 MIR5591-201ENST00000578248 65 ntBASIC-1.83□□□□□ -2.7
HIST1H1CP16403 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.84□□□□□ -2.7
HIST1H1CP16403 RNU4-71P-201ENST00000516258 113 ntBASIC-1.84□□□□□ -2.7
HIST1H1CP16403 MIR548S-201ENST00000581352 82 ntBASIC-1.84□□□□□ -2.7
HIST1H1CP16403 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 RNU6-915P-201ENST00000364943 103 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 RNU6-382P-201ENST00000365181 106 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 MIR577-201ENST00000385196 96 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 MTATP8P1-201ENST00000467115 207 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 RNU6-62P-201ENST00000516526 102 ntBASIC-1.85□□□□□ -2.71
HIST1H1CP16403 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.86□□□□□ -2.71
HIST1H1CP16403 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.86□□□□□ -2.71
HIST1H1CP16403 AL353691.2-201ENST00000443795 59 ntBASIC-1.86□□□□□ -2.71
HIST1H1CP16403 RNU7-197P-201ENST00000458836 62 ntBASIC-1.86□□□□□ -2.71
HIST1H1CP16403 RNA5SP147-201ENST00000516493 109 ntBASIC-1.86□□□□□ -2.71
HIST1H1CP16403 SNORA2.1-201ENST00000363089 137 ntBASIC-1.87□□□□□ -2.71
HIST1H1CP16403 SNORD115-22-201ENST00000364456 82 ntBASIC-1.87□□□□□ -2.71
HIST1H1CP16403 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.87□□□□□ -2.71
HIST1H1CP16403 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.87□□□□□ -2.71
HIST1H1CP16403 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.87□□□□□ -2.71
HIST1H1CP16403 SNORD4B-201ENST00000459083 72 ntBASIC-1.87□□□□□ -2.71
HIST1H1CP16403 MIR4694-201ENST00000578534 80 ntBASIC-1.87□□□□□ -2.71
HIST1H1CP16403 RNA5SP26-201ENST00000362406 119 ntBASIC-1.88□□□□□ -2.71
HIST1H1CP16403 RNU6-644P-201ENST00000391155 98 ntBASIC-1.88□□□□□ -2.71
HIST1H1CP16403 RNU6-460P-201ENST00000391158 108 ntBASIC-1.88□□□□□ -2.71
HIST1H1CP16403 RNU7-154P-201ENST00000516194 62 ntBASIC-1.88□□□□□ -2.71
HIST1H1CP16403 MIR4439-201ENST00000583746 80 ntBASIC-1.88□□□□□ -2.71
HIST1H1CP16403 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.89□□□□□ -2.71
HIST1H1CP16403 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms