Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.74□□□□□ -2.85
TPM1P09493 AC022028.1-201ENST00000412054 408 ntBASIC-2.74□□□□□ -2.85
TPM1P09493 RNU7-85P-201ENST00000458851 63 ntBASIC-2.74□□□□□ -2.85
TPM1P09493 RNU6-132P-201ENST00000383863 107 ntBASIC-2.75□□□□□ -2.85
TPM1P09493 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.75□□□□□ -2.85
TPM1P09493 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.75□□□□□ -2.85
TPM1P09493 MIR548P-201ENST00000408336 84 ntBASIC-2.75□□□□□ -2.85
TPM1P09493 SNORD57-201ENST00000448188 72 ntBASIC-2.75□□□□□ -2.85
TPM1P09493 MIR3121-201ENST00000579680 77 ntBASIC-2.75□□□□□ -2.85
TPM1P09493 AC134503.1-201ENST00000633048 54 ntBASIC-2.75□□□□□ -2.85
TPM1P09493 RNU6-1283P-201ENST00000365314 105 ntBASIC-2.76□□□□□ -2.85
TPM1P09493 RNU6-918P-201ENST00000391219 106 ntBASIC-2.76□□□□□ -2.85
TPM1P09493 Y_RNA.619-201ENST00000410951 90 ntBASIC-2.76□□□□□ -2.85
TPM1P09493 AC091912.2-201ENST00000624798 167 ntBASIC-2.76□□□□□ -2.85
TPM1P09493 MIR3658-201ENST00000636291 56 ntBASIC-2.76□□□□□ -2.85
TPM1P09493 RNA5SP26-201ENST00000362406 119 ntBASIC-2.77□□□□□ -2.85
TPM1P09493 MTND5P20-201ENST00000448677 143 ntBASIC-2.77□□□□□ -2.85
TPM1P09493 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-2.77□□□□□ -2.85
TPM1P09493 RNU6-239P-201ENST00000390990 99 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 MIR1255B2-201ENST00000408618 67 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 RNA5SP461-201ENST00000516451 104 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 RNA5SP476-201ENST00000516613 103 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 MIR6129-201ENST00000616087 109 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 MIR6502-201ENST00000617296 76 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 MTND4P29-201ENST00000503122 1372 ntBASIC-2.78□□□□□ -2.85
TPM1P09493 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.79□□□□□ -2.86
TPM1P09493 AC130289.1-201ENST00000577321 73 ntBASIC-2.79□□□□□ -2.86
TPM1P09493 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.79□□□□□ -2.86
TPM1P09493 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.79□□□□□ -2.86
TPM1P09493 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.8□□□□□ -2.86
TPM1P09493 RNU4-40P-201ENST00000364351 143 ntBASIC-2.8□□□□□ -2.86
TPM1P09493 SNORD115-22-201ENST00000364456 82 ntBASIC-2.8□□□□□ -2.86
TPM1P09493 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.8□□□□□ -2.86
TPM1P09493 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.8□□□□□ -2.86
TPM1P09493 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.8□□□□□ -2.86
TPM1P09493 RNU7-121P-201ENST00000516604 62 ntBASIC-2.8□□□□□ -2.86
TPM1P09493 MIR3064-201ENST00000581130 66 ntBASIC-2.8□□□□□ -2.86
TPM1P09493 MIR409-201ENST00000362237 79 ntBASIC-2.81□□□□□ -2.86
TPM1P09493 MIR1263-201ENST00000408324 86 ntBASIC-2.81□□□□□ -2.86
TPM1P09493 MTND2P23-201ENST00000422990 651 ntBASIC-2.81□□□□□ -2.86
TPM1P09493 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.81□□□□□ -2.86
TPM1P09493 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.82□□□□□ -2.86
TPM1P09493 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.82□□□□□ -2.86
TPM1P09493 snoU13.17-201ENST00000458802 104 ntBASIC-2.82□□□□□ -2.86
TPM1P09493 MIR6874-201ENST00000635894 71 ntBASIC-2.82□□□□□ -2.86
TPM1P09493 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 SNORA33.1-201ENST00000364957 130 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 RNU6-260P-201ENST00000384092 107 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 RNU6-816P-201ENST00000390914 107 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 AL513043.2-201ENST00000573941 143 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 AC104996.3-201ENST00000590718 94 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 AC006254.2-201ENST00000603259 279 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 AL160413.1-201ENST00000622780 310 ntBASIC-2.83□□□□□ -2.86
TPM1P09493 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.84□□□□□ -2.86
TPM1P09493 RNU6-635P-201ENST00000516651 102 ntBASIC-2.84□□□□□ -2.86
TPM1P09493 RNU6-164P-201ENST00000364604 103 ntBASIC-2.85□□□□□ -2.87
TPM1P09493 CYP3A54P-201ENST00000566950 75 ntBASIC-2.85□□□□□ -2.87
TPM1P09493 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.86□□□□□ -2.87
TPM1P09493 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.86□□□□□ -2.87
TPM1P09493 SNORD58.1-201ENST00000391313 66 ntBASIC-2.86□□□□□ -2.87
TPM1P09493 AL353691.2-201ENST00000443795 59 ntBASIC-2.86□□□□□ -2.87
TPM1P09493 RNY4P6-201ENST00000363667 96 ntBASIC-2.87□□□□□ -2.87
TPM1P09493 MIR507-201ENST00000385234 94 ntBASIC-2.87□□□□□ -2.87
TPM1P09493 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.87□□□□□ -2.87
TPM1P09493 MIR3171-201ENST00000584270 74 ntBASIC-2.87□□□□□ -2.87
TPM1P09493 RNU6-238P-201ENST00000363313 106 ntBASIC-2.88□□□□□ -2.87
TPM1P09493 RNU2-38P-201ENST00000410856 79 ntBASIC-2.88□□□□□ -2.87
TPM1P09493 RNA5SP147-201ENST00000516493 109 ntBASIC-2.88□□□□□ -2.87
TPM1P09493 RNU6-382P-201ENST00000365181 106 ntBASIC-2.89□□□□□ -2.87
TPM1P09493 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.89□□□□□ -2.87
TPM1P09493 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.89□□□□□ -2.87
TPM1P09493 RNU6-226P-201ENST00000363778 107 ntBASIC-2.9□□□□□ -2.87
TPM1P09493 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.9□□□□□ -2.87
TPM1P09493 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.9□□□□□ -2.87
TPM1P09493 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.9□□□□□ -2.87
TPM1P09493 RNU7-154P-201ENST00000516194 62 ntBASIC-2.9□□□□□ -2.87
TPM1P09493 RNU6-412P-201ENST00000516434 106 ntBASIC-2.9□□□□□ -2.87
TPM1P09493 RNU6-62P-201ENST00000516526 102 ntBASIC-2.9□□□□□ -2.87
TPM1P09493 SNORA2.1-201ENST00000363089 137 ntBASIC-2.91□□□□□ -2.88
TPM1P09493 MIR577-201ENST00000385196 96 ntBASIC-2.91□□□□□ -2.88
TPM1P09493 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.92□□□□□ -2.88
TPM1P09493 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.92□□□□□ -2.88
TPM1P09493 RNU6-915P-201ENST00000364943 103 ntBASIC-2.92□□□□□ -2.88
TPM1P09493 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.92□□□□□ -2.88
TPM1P09493 AL078595.1-201ENST00000404458 226 ntBASIC-2.92□□□□□ -2.88
TPM1P09493 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.93□□□□□ -2.88
TPM1P09493 MIR6509-201ENST00000614603 85 ntBASIC-2.93□□□□□ -2.88
TPM1P09493 HAR1A.1-201ENST00000459583 118 ntBASIC-2.94□□□□□ -2.88
TPM1P09493 MIR4694-201ENST00000578534 80 ntBASIC-2.94□□□□□ -2.88
TPM1P09493 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.95□□□□□ -2.88
TPM1P09493 Y_RNA.178-201ENST00000363832 102 ntBASIC-2.95□□□□□ -2.88
TPM1P09493 RNU6-80P-201ENST00000384195 107 ntBASIC-2.95□□□□□ -2.88
TPM1P09493 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.95□□□□□ -2.88
TPM1P09493 SNORD4B-201ENST00000459083 72 ntBASIC-2.95□□□□□ -2.88
TPM1P09493 SNORA33.2-201ENST00000365413 134 ntBASIC-2.96□□□□□ -2.88
TPM1P09493 RNU6-639P-201ENST00000384074 107 ntBASIC-2.96□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 327.1 ms