Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 RNU7-85P-201ENST00000458851 63 ntBASIC-1.16□□□□□ -2.6
MT-ND3P03897 SNORD18.2-201ENST00000459604 70 ntBASIC-1.16□□□□□ -2.6
MT-ND3P03897 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.16□□□□□ -2.6
MT-ND3P03897 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.16□□□□□ -2.6
MT-ND3P03897 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.16□□□□□ -2.6
MT-ND3P03897 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.16□□□□□ -2.6
MT-ND3P03897 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.16□□□□□ -2.6
MT-ND3P03897 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.16□□□□□ -2.6
MT-ND3P03897 SNORD115-23-201ENST00000364461 82 ntBASIC-1.17□□□□□ -2.6
MT-ND3P03897 RNY1P7-201ENST00000384743 110 ntBASIC-1.17□□□□□ -2.6
MT-ND3P03897 AC072026.1-201ENST00000605023 201 ntBASIC-1.17□□□□□ -2.6
MT-ND3P03897 SNORA63.6-201ENST00000364921 119 ntBASIC-1.18□□□□□ -2.6
MT-ND3P03897 RNU6-738P-201ENST00000384531 106 ntBASIC-1.18□□□□□ -2.6
MT-ND3P03897 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.18□□□□□ -2.6
MT-ND3P03897 MIR568-201ENST00000385036 95 ntBASIC-1.18□□□□□ -2.6
MT-ND3P03897 MIR4499-201ENST00000584834 69 ntBASIC-1.18□□□□□ -2.6
MT-ND3P03897 SNORD114-17-201ENST00000364699 75 ntBASIC-1.19□□□□□ -2.6
MT-ND3P03897 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.19□□□□□ -2.6
MT-ND3P03897 RNU6-816P-201ENST00000390914 107 ntBASIC-1.19□□□□□ -2.6
MT-ND3P03897 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.19□□□□□ -2.6
MT-ND3P03897 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.19□□□□□ -2.6
MT-ND3P03897 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
MT-ND3P03897 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.19□□□□□ -2.6
MT-ND3P03897 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.2□□□□□ -2.6
MT-ND3P03897 SNORD114-4-201ENST00000363962 75 ntBASIC-1.2□□□□□ -2.6
MT-ND3P03897 RNA5SP136-201ENST00000410906 107 ntBASIC-1.2□□□□□ -2.6
MT-ND3P03897 AC140658.3-201ENST00000567603 271 ntBASIC-1.2□□□□□ -2.6
MT-ND3P03897 MIR4536-1-201ENST00000583537 88 ntBASIC-1.2□□□□□ -2.6
MT-ND3P03897 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 RNU6-151P-201ENST00000364158 107 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 SNORD90-201ENST00000391145 111 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 RNU6-65P-201ENST00000516332 98 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.21□□□□□ -2.6
MT-ND3P03897 SNORD74.6-201ENST00000364796 70 ntBASIC-1.22□□□□□ -2.6
MT-ND3P03897 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.22□□□□□ -2.6
MT-ND3P03897 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.22□□□□□ -2.6
MT-ND3P03897 MIR577-201ENST00000385196 96 ntBASIC-1.22□□□□□ -2.6
MT-ND3P03897 U3.27-201ENST00000391237 200 ntBASIC-1.22□□□□□ -2.6
MT-ND3P03897 AC021146.9-201ENST00000512503 156 ntBASIC-1.22□□□□□ -2.6
MT-ND3P03897 AL513043.2-201ENST00000573941 143 ntBASIC-1.22□□□□□ -2.6
MT-ND3P03897 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 SNORD50.2-201ENST00000365465 70 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 MIR3613-201ENST00000579844 87 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 MIR4464-201ENST00000580818 92 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 MIR382-201ENST00000637119 76 ntBASIC-1.23□□□□□ -2.61
MT-ND3P03897 RNU6-208P-201ENST00000362431 107 ntBASIC-1.24□□□□□ -2.61
MT-ND3P03897 RNU6-495P-201ENST00000362995 107 ntBASIC-1.24□□□□□ -2.61
MT-ND3P03897 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.24□□□□□ -2.61
MT-ND3P03897 MIR147A-201ENST00000385079 72 ntBASIC-1.24□□□□□ -2.61
MT-ND3P03897 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.24□□□□□ -2.61
MT-ND3P03897 RNU6-861P-201ENST00000516745 106 ntBASIC-1.24□□□□□ -2.61
MT-ND3P03897 MIR587-201ENST00000384845 96 ntBASIC-1.25□□□□□ -2.61
MT-ND3P03897 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.25□□□□□ -2.61
MT-ND3P03897 RNA5SP147-201ENST00000516493 109 ntBASIC-1.25□□□□□ -2.61
MT-ND3P03897 U6.96-201ENST00000636425 70 ntBASIC-1.25□□□□□ -2.61
MT-ND3P03897 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.26□□□□□ -2.61
MT-ND3P03897 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.26□□□□□ -2.61
MT-ND3P03897 SNORA24B-201ENST00000384176 131 ntBASIC-1.26□□□□□ -2.61
MT-ND3P03897 RNA5SP272-201ENST00000516095 111 ntBASIC-1.26□□□□□ -2.61
MT-ND3P03897 SNORA63.2-201ENST00000362603 126 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 SNX3P1X-201ENST00000414887 175 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 SCARNA18B-201ENST00000458806 135 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 SNORA81.3-201ENST00000517283 198 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 MIR3064-201ENST00000581130 66 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 MIR6888-201ENST00000621977 67 ntBASIC-1.27□□□□□ -2.61
MT-ND3P03897 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 RNA5SP292-201ENST00000390974 118 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 AL118496.2-201ENST00000448300 230 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 RNU6-274P-201ENST00000459566 107 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 AC068339.1-201ENST00000526965 141 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 AL035470.1-201ENST00000622571 220 ntBASIC-1.28□□□□□ -2.61
MT-ND3P03897 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.29□□□□□ -2.62
MT-ND3P03897 MIR203A-201ENST00000384836 110 ntBASIC-1.29□□□□□ -2.62
MT-ND3P03897 AL158147.1-201ENST00000443970 75 ntBASIC-1.29□□□□□ -2.62
MT-ND3P03897 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.29□□□□□ -2.62
MT-ND3P03897 AL353803.5-201ENST00000599815 141 ntBASIC-1.29□□□□□ -2.62
MT-ND3P03897 RNU6-682P-201ENST00000363843 106 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 YWHAEP3-201ENST00000582767 121 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 AC104996.3-201ENST00000590718 94 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.3□□□□□ -2.62
MT-ND3P03897 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.3□□□□□ -2.62
MT-ND3P03897 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms