Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.37□□□□□ -2.79
APOEP02649 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.38□□□□□ -2.79
APOEP02649 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.38□□□□□ -2.79
APOEP02649 RNU6-409P-201ENST00000384114 104 ntBASIC-2.38□□□□□ -2.79
APOEP02649 MIR3646-201ENST00000578301 84 ntBASIC-2.38□□□□□ -2.79
APOEP02649 MIR4441-201ENST00000582623 100 ntBASIC-2.38□□□□□ -2.79
APOEP02649 MIR365A-201ENST00000362260 87 ntBASIC-2.39□□□□□ -2.79
APOEP02649 RNA5SP26-201ENST00000362406 119 ntBASIC-2.39□□□□□ -2.79
APOEP02649 RNU6-132P-201ENST00000383863 107 ntBASIC-2.39□□□□□ -2.79
APOEP02649 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.39□□□□□ -2.79
APOEP02649 RNU6-474P-201ENST00000384243 107 ntBASIC-2.39□□□□□ -2.79
APOEP02649 MIR548D2-201ENST00000384955 97 ntBASIC-2.39□□□□□ -2.79
APOEP02649 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.39□□□□□ -2.79
APOEP02649 MIR1255B2-201ENST00000408618 67 ntBASIC-2.39□□□□□ -2.79
APOEP02649 SNORD127-201ENST00000458892 86 ntBASIC-2.39□□□□□ -2.79
APOEP02649 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.39□□□□□ -2.79
APOEP02649 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.4□□□□□ -2.79
APOEP02649 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.4□□□□□ -2.79
APOEP02649 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.4□□□□□ -2.79
APOEP02649 MIR548A1-201ENST00000385041 97 ntBASIC-2.4□□□□□ -2.79
APOEP02649 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.4□□□□□ -2.79
APOEP02649 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.4□□□□□ -2.79
APOEP02649 SNORD75.2-201ENST00000408784 58 ntBASIC-2.4□□□□□ -2.79
APOEP02649 RNU7-85P-201ENST00000458851 63 ntBASIC-2.4□□□□□ -2.79
APOEP02649 RNA5SP272-201ENST00000516095 111 ntBASIC-2.4□□□□□ -2.79
APOEP02649 MIR4680-201ENST00000580906 66 ntBASIC-2.4□□□□□ -2.79
APOEP02649 RNU6-164P-201ENST00000364604 103 ntBASIC-2.41□□□□□ -2.8
APOEP02649 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.41□□□□□ -2.8
APOEP02649 SNORD50.2-201ENST00000365465 70 ntBASIC-2.41□□□□□ -2.8
APOEP02649 SNORA24B-201ENST00000384176 131 ntBASIC-2.41□□□□□ -2.8
APOEP02649 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.41□□□□□ -2.8
APOEP02649 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.41□□□□□ -2.8
APOEP02649 RNU7-24P-201ENST00000458867 62 ntBASIC-2.41□□□□□ -2.8
APOEP02649 RNU6-704P-201ENST00000364162 103 ntBASIC-2.42□□□□□ -2.8
APOEP02649 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.42□□□□□ -2.8
APOEP02649 MT-TW-201ENST00000387382 68 ntBASIC-2.42□□□□□ -2.8
APOEP02649 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.42□□□□□ -2.8
APOEP02649 RNU6-713P-201ENST00000384761 107 ntBASIC-2.43□□□□□ -2.8
APOEP02649 SNORD115-22-201ENST00000364456 82 ntBASIC-2.44□□□□□ -2.8
APOEP02649 SNORA33.1-201ENST00000364957 130 ntBASIC-2.44□□□□□ -2.8
APOEP02649 RNA5SP147-201ENST00000516493 109 ntBASIC-2.44□□□□□ -2.8
APOEP02649 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.45□□□□□ -2.8
APOEP02649 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.45□□□□□ -2.8
APOEP02649 SNORD37.2-201ENST00000391075 66 ntBASIC-2.45□□□□□ -2.8
APOEP02649 MIR548P-201ENST00000408336 84 ntBASIC-2.45□□□□□ -2.8
APOEP02649 snoU13.17-201ENST00000458802 104 ntBASIC-2.45□□□□□ -2.8
APOEP02649 MIR3658-201ENST00000636291 56 ntBASIC-2.45□□□□□ -2.8
APOEP02649 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.46□□□□□ -2.8
APOEP02649 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.46□□□□□ -2.8
APOEP02649 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.46□□□□□ -2.8
APOEP02649 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.46□□□□□ -2.8
APOEP02649 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.46□□□□□ -2.8
APOEP02649 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.46□□□□□ -2.8
APOEP02649 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.46□□□□□ -2.8
APOEP02649 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.46□□□□□ -2.8
APOEP02649 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.46□□□□□ -2.8
APOEP02649 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.46□□□□□ -2.8
APOEP02649 AL078595.1-201ENST00000404458 226 ntBASIC-2.47□□□□□ -2.8
APOEP02649 MIR1302-6-201ENST00000408466 90 ntBASIC-2.47□□□□□ -2.8
APOEP02649 CYP3A54P-201ENST00000566950 75 ntBASIC-2.47□□□□□ -2.8
APOEP02649 MIR3064-201ENST00000581130 66 ntBASIC-2.47□□□□□ -2.8
APOEP02649 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.48□□□□□ -2.81
APOEP02649 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.48□□□□□ -2.81
APOEP02649 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.48□□□□□ -2.81
APOEP02649 RNU6-260P-201ENST00000384092 107 ntBASIC-2.48□□□□□ -2.81
APOEP02649 MIR548U-201ENST00000390728 81 ntBASIC-2.48□□□□□ -2.81
APOEP02649 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.48□□□□□ -2.81
APOEP02649 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.48□□□□□ -2.81
APOEP02649 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.49□□□□□ -2.81
APOEP02649 MIR507-201ENST00000385234 94 ntBASIC-2.49□□□□□ -2.81
APOEP02649 MIR1263-201ENST00000408324 86 ntBASIC-2.49□□□□□ -2.81
APOEP02649 RBMX2P4-201ENST00000441256 376 ntBASIC-2.49□□□□□ -2.81
APOEP02649 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.5□□□□□ -2.81
APOEP02649 MIR487B-201ENST00000385021 84 ntBASIC-2.5□□□□□ -2.81
APOEP02649 AL353691.2-201ENST00000443795 59 ntBASIC-2.5□□□□□ -2.81
APOEP02649 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.5□□□□□ -2.81
APOEP02649 AL513043.2-201ENST00000573941 143 ntBASIC-2.5□□□□□ -2.81
APOEP02649 MIR3121-201ENST00000579680 77 ntBASIC-2.5□□□□□ -2.81
APOEP02649 AL160413.1-201ENST00000622780 310 ntBASIC-2.5□□□□□ -2.81
APOEP02649 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.51□□□□□ -2.81
APOEP02649 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.51□□□□□ -2.81
APOEP02649 RNU6-382P-201ENST00000365181 106 ntBASIC-2.51□□□□□ -2.81
APOEP02649 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.51□□□□□ -2.81
APOEP02649 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.51□□□□□ -2.81
APOEP02649 MIR4723-201ENST00000585070 81 ntBASIC-2.51□□□□□ -2.81
APOEP02649 RNU6-312P-201ENST00000364629 107 ntBASIC-2.52□□□□□ -2.81
APOEP02649 MIR203A-201ENST00000384836 110 ntBASIC-2.52□□□□□ -2.81
APOEP02649 RNU6-918P-201ENST00000391219 106 ntBASIC-2.52□□□□□ -2.81
APOEP02649 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.52□□□□□ -2.81
APOEP02649 AC104996.3-201ENST00000590718 94 ntBASIC-2.52□□□□□ -2.81
APOEP02649 U6.104-201ENST00000637979 90 ntBASIC-2.52□□□□□ -2.81
APOEP02649 RNU6-228P-201ENST00000362700 106 ntBASIC-2.53□□□□□ -2.81
APOEP02649 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.53□□□□□ -2.81
APOEP02649 RNU6-816P-201ENST00000390914 107 ntBASIC-2.53□□□□□ -2.81
APOEP02649 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.53□□□□□ -2.81
APOEP02649 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.53□□□□□ -2.81
APOEP02649 RNA5SP136-201ENST00000410906 107 ntBASIC-2.53□□□□□ -2.81
APOEP02649 U4.2-201ENST00000618561 85 ntBASIC-2.53□□□□□ -2.81
APOEP02649 MTND4P29-201ENST00000503122 1372 ntBASIC-2.53□□□□□ -2.81
APOEP02649 SNORD115-27-201ENST00000364430 82 ntBASIC-2.54□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms