Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-478P-201ENST00000363904 110 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 SNORD50.2-201ENST00000365465 70 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU6-908P-201ENST00000410160 94 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU7-30P-201ENST00000516835 62 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 MIR4272-201ENST00000635924 64 ntBASIC-1.77□□□□□ -2.69
SPTA1P02549 RNU4-90P-201ENST00000362773 141 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 MIR122-201ENST00000385044 85 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 RNA5SP292-201ENST00000390974 118 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 VN1R91P-201ENST00000594377 169 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 RNU6-824P-201ENST00000363724 104 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 SNORD115-46-201ENST00000390982 71 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 RNU4-43P-201ENST00000410628 137 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 RNU7-85P-201ENST00000458851 63 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 RNU7-123P-201ENST00000515911 60 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.78□□□□□ -2.69
SPTA1P02549 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 RNU6-694P-201ENST00000364071 147 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 MTND3P2-201ENST00000438452 342 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 MIR379-201ENST00000362218 67 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 RNU6-890P-201ENST00000384121 107 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 RNU6-662P-201ENST00000384253 104 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 MIR520D-201ENST00000385002 87 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 AL445567.1-201ENST00000439121 144 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 RNU6-240P-201ENST00000516098 97 ntBASIC-1.79□□□□□ -2.7
SPTA1P02549 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 MTND4P17-201ENST00000470444 350 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 RNU6-311P-201ENST00000516224 102 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 RNU6-699P-201ENST00000517081 110 ntBASIC-1.8□□□□□ -2.7
SPTA1P02549 MTND5P26-201ENST00000426018 1752 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 RNU7-164P-201ENST00000459221 62 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 U6.97-201ENST00000636904 101 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.81□□□□□ -2.7
SPTA1P02549 MIR548P-201ENST00000408336 84 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 RNA5SP106-201ENST00000517274 100 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 U2.18-201ENST00000622185 84 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 RNU6-508P-201ENST00000363231 103 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 RNU6-937P-201ENST00000384325 106 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 AC097484.2-201ENST00000509147 251 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 AL050303.3-201ENST00000613704 284 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 AC015540.1-201ENST00000615828 501 ntBASIC-1.82□□□□□ -2.7
SPTA1P02549 RNU6-682P-201ENST00000363843 106 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 SNORA40.4-201ENST00000390971 128 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 MIR23C-201ENST00000579846 100 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 AC080013.6-201ENST00000606185 215 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 AC025166.1-201ENST00000612411 163 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 AC092794.1-201ENST00000612734 582 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 AC090574.1-201ENST00000623186 233 ntBASIC-1.83□□□□□ -2.7
SPTA1P02549 MIR759-201ENST00000390224 91 ntBASIC-1.84□□□□□ -2.7
SPTA1P02549 RNU6-415P-201ENST00000516252 97 ntBASIC-1.84□□□□□ -2.7
SPTA1P02549 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.84□□□□□ -2.7
SPTA1P02549 AL359880.1-201ENST00000621879 266 ntBASIC-1.84□□□□□ -2.7
SPTA1P02549 RNU6-409P-201ENST00000384114 104 ntBASIC-1.85□□□□□ -2.7
SPTA1P02549 RNU6-616P-201ENST00000384353 107 ntBASIC-1.85□□□□□ -2.7
SPTA1P02549 RNU6-141P-201ENST00000410499 105 ntBASIC-1.85□□□□□ -2.7
SPTA1P02549 RNU6-518P-201ENST00000516056 96 ntBASIC-1.85□□□□□ -2.7
SPTA1P02549 U2.7-201ENST00000619197 100 ntBASIC-1.85□□□□□ -2.7
SPTA1P02549 U4.4-201ENST00000620626 117 ntBASIC-1.85□□□□□ -2.7
SPTA1P02549 SNORD113-6-201ENST00000363345 75 ntBASIC-1.85□□□□□ -2.71
SPTA1P02549 RNU1-115P-201ENST00000365329 160 ntBASIC-1.85□□□□□ -2.71
SPTA1P02549 RNU6-656P-201ENST00000516785 107 ntBASIC-1.85□□□□□ -2.71
SPTA1P02549 MTATP6P25-201ENST00000574491 261 ntBASIC-1.85□□□□□ -2.71
SPTA1P02549 AC113139.1-201ENST00000605049 239 ntBASIC-1.85□□□□□ -2.71
SPTA1P02549 AC107308.1-201ENST00000615897 301 ntBASIC-1.85□□□□□ -2.71
SPTA1P02549 RNU6-766P-201ENST00000362478 107 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 RNU6-451P-201ENST00000362921 107 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 RNU6-649P-201ENST00000384463 107 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 RNU6-314P-201ENST00000516574 104 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 MIR4744-201ENST00000581563 82 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 AC025253.1-201ENST00000613623 543 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 SNORD18B-201ENST00000365659 72 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 SNORD4B-201ENST00000459083 72 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 RN7SKP298-201ENST00000515950 94 ntBASIC-1.86□□□□□ -2.71
SPTA1P02549 SNORD18C-201ENST00000362704 69 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 MIR548C-201ENST00000384815 97 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms