Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNA5SP245-201ENST00000364239 121 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 Y_RNA.363-201ENST00000365529 113 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 MIR942-201ENST00000401111 86 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 AC244505.6-201ENST00000452829 130 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 RNU7-56P-201ENST00000458744 62 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 MIR4804-201ENST00000581683 73 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 AL590095.2-201ENST00000604136 117 ntBASIC1.09□□□□□ -2.24
COL3A1P02461 SNORD114-2-201ENST00000363953 78 ntBASIC1.08□□□□□ -2.24
COL3A1P02461 SNORD115-44-201ENST00000365391 82 ntBASIC1.08□□□□□ -2.24
COL3A1P02461 RNU6-1241P-201ENST00000384536 107 ntBASIC1.08□□□□□ -2.24
COL3A1P02461 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
COL3A1P02461 SNORD30.1-201ENST00000391309 70 ntBASIC1.08□□□□□ -2.24
COL3A1P02461 RNU6-287P-201ENST00000516230 98 ntBASIC1.08□□□□□ -2.24
COL3A1P02461 Y_RNA.174-201ENST00000363781 105 ntBASIC1.07□□□□□ -2.24
COL3A1P02461 SNORA24B-201ENST00000384176 131 ntBASIC1.07□□□□□ -2.24
COL3A1P02461 MIR451A-201ENST00000385059 72 ntBASIC1.07□□□□□ -2.24
COL3A1P02461 MIR100-201ENST00000385259 80 ntBASIC1.07□□□□□ -2.24
COL3A1P02461 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COL3A1P02461 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.07□□□□□ -2.24
COL3A1P02461 RNU6-955P-201ENST00000410497 104 ntBASIC1.07□□□□□ -2.24
COL3A1P02461 MIR6513-201ENST00000621188 64 ntBASIC1.07□□□□□ -2.24
COL3A1P02461 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL3A1P02461 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
COL3A1P02461 RNA5SP257-201ENST00000363023 116 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 Y_RNA.340-201ENST00000365330 92 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 RNU6-154P-201ENST00000384306 106 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL3A1P02461 AC067940.1-201ENST00000458411 300 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 SNORD79.1-201ENST00000516069 84 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 RNU6-1265P-201ENST00000516342 103 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.06□□□□□ -2.24
COL3A1P02461 RNU6-540P-201ENST00000384622 101 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 RNU6-1177P-201ENST00000391058 104 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 MIR8053-201ENST00000613344 75 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 AL109933.3-201ENST00000619095 188 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 RNU6-330P-201ENST00000363015 107 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 MIR520F-201ENST00000384824 87 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 MIR216B-201ENST00000390186 82 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 RNU6-663P-201ENST00000391105 106 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 RNU7-13P-201ENST00000516413 62 ntBASIC1.05□□□□□ -2.24
COL3A1P02461 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
COL3A1P02461 RNU6-369P-201ENST00000362515 102 ntBASIC1.04□□□□□ -2.24
COL3A1P02461 MIR936-201ENST00000401264 98 ntBASIC1.04□□□□□ -2.24
COL3A1P02461 RNA5SP193-201ENST00000410353 107 ntBASIC1.04□□□□□ -2.24
COL3A1P02461 U6.81-201ENST00000612550 106 ntBASIC1.04□□□□□ -2.24
COL3A1P02461 uc_338.16-201ENST00000621804 95 ntBASIC1.04□□□□□ -2.24
COL3A1P02461 SNORD45.1-201ENST00000363181 77 ntBASIC1.03□□□□□ -2.24
COL3A1P02461 RNU6-824P-201ENST00000363724 104 ntBASIC1.03□□□□□ -2.24
COL3A1P02461 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
COL3A1P02461 RNU6-274P-201ENST00000459566 107 ntBASIC1.03□□□□□ -2.24
COL3A1P02461 SNORA31.14-201ENST00000516728 116 ntBASIC1.03□□□□□ -2.24
COL3A1P02461 MIR330-201ENST00000362196 94 ntBASIC1.02□□□□□ -2.25
COL3A1P02461 SNORD115-24-201ENST00000363528 82 ntBASIC1.02□□□□□ -2.25
COL3A1P02461 RNU6-895P-201ENST00000384125 103 ntBASIC1.02□□□□□ -2.25
COL3A1P02461 RNU6-800P-201ENST00000384473 103 ntBASIC1.02□□□□□ -2.25
COL3A1P02461 RNU6-351P-201ENST00000516097 100 ntBASIC1.02□□□□□ -2.25
COL3A1P02461 AC010487.4-201ENST00000637027 61 ntBASIC1.02□□□□□ -2.25
COL3A1P02461 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
COL3A1P02461 RNA5SP117-201ENST00000365294 118 ntBASIC1.01□□□□□ -2.25
COL3A1P02461 SNORD115-31-201ENST00000365318 82 ntBASIC1.01□□□□□ -2.25
COL3A1P02461 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.01□□□□□ -2.25
COL3A1P02461 U6.111-201ENST00000636093 83 ntBASIC1.01□□□□□ -2.25
COL3A1P02461 MIR1827-201ENST00000408549 66 ntBASIC1□□□□□ -2.25
COL3A1P02461 MIR2113-201ENST00000459007 91 ntBASIC1□□□□□ -2.25
COL3A1P02461 RNU6-752P-201ENST00000516376 102 ntBASIC1□□□□□ -2.25
COL3A1P02461 AL136317.1-201ENST00000612653 226 ntBASIC1□□□□□ -2.25
COL3A1P02461 DLEU2_3.2-201ENST00000612883 73 ntBASIC1□□□□□ -2.25
COL3A1P02461 MIR4773-1-201ENST00000637203 78 ntBASIC1□□□□□ -2.25
COL3A1P02461 MIR924-201ENST00000638017 53 ntBASIC1□□□□□ -2.25
COL3A1P02461 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL3A1P02461 RNA5SP403-201ENST00000363598 108 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 Y_RNA.386-201ENST00000383913 105 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 RNU6-471P-201ENST00000383944 106 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 MIR617-201ENST00000385030 97 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 AL691482.2-201ENST00000457453 84 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 MIR3920-201ENST00000581751 86 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 AL627230.5-201ENST00000619807 58 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 AC067863.3-201ENST00000624172 122 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 RNU6-1126P-201ENST00000384002 107 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 RNU6-939P-201ENST00000384634 107 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 AC002429.1-201ENST00000437672 148 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 AC093423.1-201ENST00000440817 142 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 RNU6-135P-201ENST00000516769 101 ntBASIC0.99□□□□□ -2.25
COL3A1P02461 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
COL3A1P02461 SNORD115-22-201ENST00000364456 82 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 RNU6-382P-201ENST00000365181 106 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 RNU6-630P-201ENST00000391258 106 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 MIR1265-201ENST00000408444 86 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 RNU7-24P-201ENST00000458867 62 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 RNU7-74P-201ENST00000459104 62 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 RNU7-161P-201ENST00000517289 62 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 MIR4711-201ENST00000578274 70 ntBASIC0.98□□□□□ -2.25
COL3A1P02461 Y_RNA.32-201ENST00000362589 110 ntBASIC0.97□□□□□ -2.25
COL3A1P02461 SNORD114-23-201ENST00000363536 72 ntBASIC0.97□□□□□ -2.25
COL3A1P02461 AC244098.3-201ENST00000424803 96 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms