Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNA5SP403-201ENST00000363598 108 ntBASIC0.72□□□□□ -2.29
LDLRP01130 MIR644A-201ENST00000385262 94 ntBASIC0.72□□□□□ -2.29
LDLRP01130 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
LDLRP01130 MIR8087-201ENST00000612745 78 ntBASIC0.72□□□□□ -2.29
LDLRP01130 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
LDLRP01130 MIRLET7A1-201ENST00000362295 80 ntBASIC0.71□□□□□ -2.3
LDLRP01130 RNU6-315P-201ENST00000362666 107 ntBASIC0.71□□□□□ -2.3
LDLRP01130 RNU6-161P-201ENST00000363051 106 ntBASIC0.71□□□□□ -2.3
LDLRP01130 Y_RNA.207-201ENST00000364142 106 ntBASIC0.71□□□□□ -2.3
LDLRP01130 SNORD101-201ENST00000384027 73 ntBASIC0.71□□□□□ -2.3
LDLRP01130 Y_RNA.532-201ENST00000384590 113 ntBASIC0.71□□□□□ -2.3
LDLRP01130 MIR548U-201ENST00000390728 81 ntBASIC0.71□□□□□ -2.3
LDLRP01130 RNA5SP193-201ENST00000410353 107 ntBASIC0.71□□□□□ -2.3
LDLRP01130 Y_RNA.596-201ENST00000410462 109 ntBASIC0.71□□□□□ -2.3
LDLRP01130 AC244098.3-201ENST00000424803 96 ntBASIC0.71□□□□□ -2.3
LDLRP01130 MIR548AG2-201ENST00000581228 64 ntBASIC0.71□□□□□ -2.3
LDLRP01130 MIR3140-201ENST00000583685 90 ntBASIC0.71□□□□□ -2.3
LDLRP01130 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
LDLRP01130 MIR330-201ENST00000362196 94 ntBASIC0.7□□□□□ -2.3
LDLRP01130 SNORD115-24-201ENST00000363528 82 ntBASIC0.7□□□□□ -2.3
LDLRP01130 Y_RNA.174-201ENST00000363781 105 ntBASIC0.7□□□□□ -2.3
LDLRP01130 RNU6-1051P-201ENST00000365471 102 ntBASIC0.7□□□□□ -2.3
LDLRP01130 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LDLRP01130 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
LDLRP01130 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
LDLRP01130 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.7□□□□□ -2.3
LDLRP01130 RNU6-287P-201ENST00000516230 98 ntBASIC0.7□□□□□ -2.3
LDLRP01130 RNU6-1108P-201ENST00000516308 104 ntBASIC0.7□□□□□ -2.3
LDLRP01130 MIR3920-201ENST00000581751 86 ntBASIC0.7□□□□□ -2.3
LDLRP01130 Y_RNA.239-201ENST00000364444 113 ntBASIC0.69□□□□□ -2.3
LDLRP01130 SNORA24B-201ENST00000384176 131 ntBASIC0.69□□□□□ -2.3
LDLRP01130 MIR4711-201ENST00000578274 70 ntBASIC0.69□□□□□ -2.3
LDLRP01130 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.69□□□□□ -2.3
LDLRP01130 Y_RNA.788-201ENST00000622394 112 ntBASIC0.69□□□□□ -2.3
LDLRP01130 RNU6-1229P-201ENST00000364295 107 ntBASIC0.68□□□□□ -2.3
LDLRP01130 RNU6-686P-201ENST00000364839 107 ntBASIC0.68□□□□□ -2.3
LDLRP01130 RNU6-716P-201ENST00000365621 103 ntBASIC0.68□□□□□ -2.3
LDLRP01130 MIR573-201ENST00000384964 99 ntBASIC0.68□□□□□ -2.3
LDLRP01130 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
LDLRP01130 FGF7P7-201ENST00000514120 227 ntBASIC0.68□□□□□ -2.3
LDLRP01130 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
LDLRP01130 SNORD18A-201ENST00000363753 72 ntBASIC0.67□□□□□ -2.3
LDLRP01130 RNU6-1126P-201ENST00000384002 107 ntBASIC0.67□□□□□ -2.3
LDLRP01130 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
LDLRP01130 SNORD28-201ENST00000384706 75 ntBASIC0.67□□□□□ -2.3
LDLRP01130 RNU6-935P-201ENST00000410371 100 ntBASIC0.67□□□□□ -2.3
LDLRP01130 RNU6-1052P-201ENST00000411398 104 ntBASIC0.67□□□□□ -2.3
LDLRP01130 RNU6-719P-201ENST00000516671 104 ntBASIC0.67□□□□□ -2.3
LDLRP01130 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
LDLRP01130 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
LDLRP01130 RNA5SP62-201ENST00000363457 110 ntBASIC0.66□□□□□ -2.3
LDLRP01130 RNU6-776P-201ENST00000364403 104 ntBASIC0.66□□□□□ -2.3
LDLRP01130 RNU6-1022P-201ENST00000365049 104 ntBASIC0.66□□□□□ -2.3
LDLRP01130 RNA5SP117-201ENST00000365294 118 ntBASIC0.66□□□□□ -2.3
LDLRP01130 SNORD77.2-201ENST00000391045 68 ntBASIC0.66□□□□□ -2.3
LDLRP01130 MIR889-201ENST00000401280 79 ntBASIC0.66□□□□□ -2.3
LDLRP01130 SCARNA18B-201ENST00000458806 135 ntBASIC0.66□□□□□ -2.3
LDLRP01130 MIR2113-201ENST00000459007 91 ntBASIC0.66□□□□□ -2.3
LDLRP01130 RNA5SP47-201ENST00000517230 109 ntBASIC0.66□□□□□ -2.3
LDLRP01130 MIR3678-201ENST00000578455 94 ntBASIC0.66□□□□□ -2.3
LDLRP01130 AC244669.1-204ENST00000621564 178 ntBASIC0.66□□□□□ -2.3
LDLRP01130 RNU6-208P-201ENST00000362431 107 ntBASIC0.65□□□□□ -2.31
LDLRP01130 MIR451A-201ENST00000385059 72 ntBASIC0.65□□□□□ -2.31
LDLRP01130 RNU7-104P-201ENST00000459398 79 ntBASIC0.65□□□□□ -2.31
LDLRP01130 Y_RNA.660-201ENST00000516002 120 ntBASIC0.65□□□□□ -2.31
LDLRP01130 RNU7-13P-201ENST00000516413 62 ntBASIC0.65□□□□□ -2.31
LDLRP01130 MIR4639-201ENST00000584938 69 ntBASIC0.65□□□□□ -2.31
LDLRP01130 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.65□□□□□ -2.31
LDLRP01130 RNU6-824P-201ENST00000363724 104 ntBASIC0.64□□□□□ -2.31
LDLRP01130 RNU6-726P-201ENST00000364680 107 ntBASIC0.64□□□□□ -2.31
LDLRP01130 SNORD115-44-201ENST00000365391 82 ntBASIC0.64□□□□□ -2.31
LDLRP01130 RNY1P8-201ENST00000383970 114 ntBASIC0.64□□□□□ -2.31
LDLRP01130 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
LDLRP01130 MIR519E-201ENST00000385075 84 ntBASIC0.64□□□□□ -2.31
LDLRP01130 SNORD41.1-201ENST00000391000 69 ntBASIC0.64□□□□□ -2.31
LDLRP01130 RNU6-523P-201ENST00000516304 54 ntBASIC0.64□□□□□ -2.31
LDLRP01130 AC145423.2-201ENST00000610631 239 ntBASIC0.64□□□□□ -2.31
LDLRP01130 MIR18A-201ENST00000362310 71 ntBASIC0.63□□□□□ -2.31
LDLRP01130 RNU6-1094P-201ENST00000362416 104 ntBASIC0.63□□□□□ -2.31
LDLRP01130 SNORA36.1-201ENST00000363424 132 ntBASIC0.63□□□□□ -2.31
LDLRP01130 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
LDLRP01130 MIR1197-201ENST00000408818 88 ntBASIC0.63□□□□□ -2.31
LDLRP01130 AC074348.1-201ENST00000426503 132 ntBASIC0.63□□□□□ -2.31
LDLRP01130 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
LDLRP01130 AC067863.3-201ENST00000624172 122 ntBASIC0.63□□□□□ -2.31
LDLRP01130 Y_RNA.12-201ENST00000362393 112 ntBASIC0.62□□□□□ -2.31
LDLRP01130 RNU6-330P-201ENST00000363015 107 ntBASIC0.62□□□□□ -2.31
LDLRP01130 RNU6-340P-201ENST00000364005 107 ntBASIC0.62□□□□□ -2.31
LDLRP01130 Y_RNA.264-201ENST00000364665 102 ntBASIC0.62□□□□□ -2.31
LDLRP01130 MIR617-201ENST00000385030 97 ntBASIC0.62□□□□□ -2.31
LDLRP01130 AC093423.1-201ENST00000440817 142 ntBASIC0.62□□□□□ -2.31
LDLRP01130 RNA5SP476-201ENST00000516613 103 ntBASIC0.62□□□□□ -2.31
LDLRP01130 MIR3134-201ENST00000579433 74 ntBASIC0.62□□□□□ -2.31
LDLRP01130 YWHAEP2-201ENST00000580066 112 ntBASIC0.62□□□□□ -2.31
LDLRP01130 YWHAEP3-201ENST00000582767 121 ntBASIC0.62□□□□□ -2.31
LDLRP01130 MIR4484-201ENST00000582855 83 ntBASIC0.62□□□□□ -2.31
LDLRP01130 MIR6828-201ENST00000636181 60 ntBASIC0.62□□□□□ -2.31
LDLRP01130 MIR4662A-201ENST00000637499 67 ntBASIC0.62□□□□□ -2.31
LDLRP01130 RNY4P3-201ENST00000365254 95 ntBASIC0.61□□□□□ -2.31
LDLRP01130 RNU6-1296P-201ENST00000383879 107 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms