Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-75P-201ENST00000515944 104 ntBASIC-0.71□□□□□ -2.52
GGPS1O95749 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.71□□□□□ -2.52
GGPS1O95749 SNORD95.1-201ENST00000364099 68 ntBASIC-0.72□□□□□ -2.52
GGPS1O95749 MIR451A-201ENST00000385059 72 ntBASIC-0.72□□□□□ -2.52
GGPS1O95749 AC090425.1-201ENST00000610007 140 ntBASIC-0.72□□□□□ -2.52
GGPS1O95749 U3.27-201ENST00000391237 200 ntBASIC-0.73□□□□□ -2.53
GGPS1O95749 RNU6-284P-201ENST00000411105 106 ntBASIC-0.73□□□□□ -2.53
GGPS1O95749 RNU7-107P-201ENST00000459121 61 ntBASIC-0.73□□□□□ -2.53
GGPS1O95749 AC114755.3-201ENST00000481111 251 ntBASIC-0.73□□□□□ -2.53
GGPS1O95749 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.73□□□□□ -2.53
GGPS1O95749 AC068339.1-201ENST00000526965 141 ntBASIC-0.73□□□□□ -2.53
GGPS1O95749 RNU6-86P-201ENST00000606534 107 ntBASIC-0.73□□□□□ -2.53
GGPS1O95749 SNORD50.2-201ENST00000365465 70 ntBASIC-0.74□□□□□ -2.53
GGPS1O95749 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.74□□□□□ -2.53
GGPS1O95749 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.74□□□□□ -2.53
GGPS1O95749 RNU6-65P-201ENST00000516332 98 ntBASIC-0.74□□□□□ -2.53
GGPS1O95749 RNU6-794P-201ENST00000517261 64 ntBASIC-0.74□□□□□ -2.53
GGPS1O95749 MIR4439-201ENST00000583746 80 ntBASIC-0.74□□□□□ -2.53
GGPS1O95749 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.75□□□□□ -2.53
GGPS1O95749 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
GGPS1O95749 RNU6-255P-201ENST00000516957 105 ntBASIC-0.75□□□□□ -2.53
GGPS1O95749 RNA5SP66-201ENST00000517178 101 ntBASIC-0.75□□□□□ -2.53
GGPS1O95749 MIR3914-2-201ENST00000637339 95 ntBASIC-0.75□□□□□ -2.53
GGPS1O95749 RNA5SP368-201ENST00000364298 116 ntBASIC-0.76□□□□□ -2.53
GGPS1O95749 MIR9-2-201ENST00000384838 87 ntBASIC-0.76□□□□□ -2.53
GGPS1O95749 RNU6-971P-201ENST00000516920 106 ntBASIC-0.76□□□□□ -2.53
GGPS1O95749 RNU6-346P-201ENST00000516288 111 ntBASIC-0.77□□□□□ -2.53
GGPS1O95749 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.77□□□□□ -2.53
GGPS1O95749 AP000676.1-201ENST00000533307 52 ntBASIC-0.77□□□□□ -2.53
GGPS1O95749 AL513043.2-201ENST00000573941 143 ntBASIC-0.77□□□□□ -2.53
GGPS1O95749 MIR4432-201ENST00000581823 84 ntBASIC-0.77□□□□□ -2.53
GGPS1O95749 MIR4536-1-201ENST00000583537 88 ntBASIC-0.77□□□□□ -2.53
GGPS1O95749 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.77□□□□□ -2.53
GGPS1O95749 SNORD45B-201ENST00000364617 72 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 RNU6-54P-201ENST00000365563 107 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 RPS29P8-201ENST00000445109 171 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 SNORD2-201ENST00000459163 69 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 MIR5009-201ENST00000578736 100 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 MIR3613-201ENST00000579844 87 ntBASIC-0.78□□□□□ -2.53
GGPS1O95749 RNU6-80P-201ENST00000384195 107 ntBASIC-0.79□□□□□ -2.54
GGPS1O95749 RNU6-900P-201ENST00000384498 102 ntBASIC-0.79□□□□□ -2.54
GGPS1O95749 SNORA49-201ENST00000386157 136 ntBASIC-0.79□□□□□ -2.54
GGPS1O95749 SNORD114-4-201ENST00000363962 75 ntBASIC-0.8□□□□□ -2.54
GGPS1O95749 RNU7-85P-201ENST00000458851 63 ntBASIC-0.8□□□□□ -2.54
GGPS1O95749 U6.95-201ENST00000636931 70 ntBASIC-0.8□□□□□ -2.54
GGPS1O95749 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.81□□□□□ -2.54
GGPS1O95749 SNORD115-25-201ENST00000362619 82 ntBASIC-0.81□□□□□ -2.54
GGPS1O95749 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.81□□□□□ -2.54
GGPS1O95749 SNORD33.1-201ENST00000516213 88 ntBASIC-0.81□□□□□ -2.54
GGPS1O95749 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.82□□□□□ -2.54
GGPS1O95749 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.82□□□□□ -2.54
GGPS1O95749 MIR548A1-201ENST00000385041 97 ntBASIC-0.82□□□□□ -2.54
GGPS1O95749 RNU6-762P-201ENST00000517107 102 ntBASIC-0.82□□□□□ -2.54
GGPS1O95749 AC093726.3-201ENST00000637588 150 ntBASIC-0.82□□□□□ -2.54
GGPS1O95749 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.83□□□□□ -2.54
GGPS1O95749 RNU6-813P-201ENST00000384691 107 ntBASIC-0.83□□□□□ -2.54
GGPS1O95749 RNU6-644P-201ENST00000391155 98 ntBASIC-0.83□□□□□ -2.54
GGPS1O95749 AC145423.2-201ENST00000610631 239 ntBASIC-0.83□□□□□ -2.54
GGPS1O95749 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.84□□□□□ -2.54
GGPS1O95749 RNY4P3-201ENST00000365254 95 ntBASIC-0.84□□□□□ -2.54
GGPS1O95749 MIR548A3-201ENST00000385297 97 ntBASIC-0.84□□□□□ -2.54
GGPS1O95749 AL445193.1-201ENST00000441183 141 ntBASIC-0.84□□□□□ -2.54
GGPS1O95749 SNORD114-15-201ENST00000364687 72 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 MIR548E-201ENST00000408287 88 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 FGF7P7-201ENST00000514120 227 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 RNU6-659P-201ENST00000516454 104 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 SNORA40.17-201ENST00000517256 115 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 AC103810.7-201ENST00000607821 91 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 AL391099.1-201ENST00000624635 187 ntBASIC-0.85□□□□□ -2.55
GGPS1O95749 MIR582-201ENST00000365731 98 ntBASIC-0.86□□□□□ -2.55
GGPS1O95749 RNU6-901P-201ENST00000384593 106 ntBASIC-0.86□□□□□ -2.55
GGPS1O95749 MIR548U-201ENST00000390728 81 ntBASIC-0.86□□□□□ -2.55
GGPS1O95749 SNORD75.1-201ENST00000408373 60 ntBASIC-0.86□□□□□ -2.55
GGPS1O95749 RNU6-132P-201ENST00000383863 107 ntBASIC-0.87□□□□□ -2.55
GGPS1O95749 MIR224-201ENST00000384889 81 ntBASIC-0.87□□□□□ -2.55
GGPS1O95749 RNU6-907P-201ENST00000390924 102 ntBASIC-0.87□□□□□ -2.55
GGPS1O95749 SNORD42B-201ENST00000458893 67 ntBASIC-0.87□□□□□ -2.55
GGPS1O95749 RNU7-55P-201ENST00000459426 62 ntBASIC-0.87□□□□□ -2.55
GGPS1O95749 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.88□□□□□ -2.55
GGPS1O95749 SNORD56B-201ENST00000384713 71 ntBASIC-0.88□□□□□ -2.55
GGPS1O95749 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
GGPS1O95749 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.88□□□□□ -2.55
GGPS1O95749 RNU6-719P-201ENST00000516671 104 ntBASIC-0.88□□□□□ -2.55
GGPS1O95749 SNORA63.2-201ENST00000362603 126 ntBASIC-0.89□□□□□ -2.55
GGPS1O95749 RNU4-36P-201ENST00000364294 144 ntBASIC-0.89□□□□□ -2.55
GGPS1O95749 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.89□□□□□ -2.55
GGPS1O95749 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.89□□□□□ -2.55
GGPS1O95749 SNORA3B-201ENST00000391305 131 ntBASIC-0.89□□□□□ -2.55
GGPS1O95749 RNA5SP169-201ENST00000517268 117 ntBASIC-0.89□□□□□ -2.55
GGPS1O95749 MIR3064-201ENST00000581130 66 ntBASIC-0.89□□□□□ -2.55
GGPS1O95749 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.9□□□□□ -2.55
GGPS1O95749 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.9□□□□□ -2.55
GGPS1O95749 snoU13.13-201ENST00000458842 104 ntBASIC-0.9□□□□□ -2.55
GGPS1O95749 SNORD4B-201ENST00000459083 72 ntBASIC-0.9□□□□□ -2.55
GGPS1O95749 snoU13.19-201ENST00000459148 104 ntBASIC-0.9□□□□□ -2.55
GGPS1O95749 AC104996.3-201ENST00000590718 94 ntBASIC-0.9□□□□□ -2.55
GGPS1O95749 SNORD114-14-201ENST00000362723 75 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms