Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC244669.1-204ENST00000621564 178 ntBASIC2.01□□□□□ -2.09
RNF40O75150 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
RNF40O75150 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RNF40O75150 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RNF40O75150 MIR521-2-201ENST00000384818 87 ntBASIC2□□□□□ -2.09
RNF40O75150 Y_RNA.164-201ENST00000363709 102 ntBASIC1.99□□□□□ -2.09
RNF40O75150 RNU6-726P-201ENST00000364680 107 ntBASIC1.99□□□□□ -2.09
RNF40O75150 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF40O75150 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.99□□□□□ -2.09
RNF40O75150 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RNF40O75150 SNORD12-201ENST00000391002 90 ntBASIC1.98□□□□□ -2.09
RNF40O75150 RNA5SP247-201ENST00000411181 105 ntBASIC1.98□□□□□ -2.09
RNF40O75150 AC008834.1-201ENST00000511612 175 ntBASIC1.98□□□□□ -2.09
RNF40O75150 MIR4460-201ENST00000577862 86 ntBASIC1.98□□□□□ -2.09
RNF40O75150 MIR548V-201ENST00000584165 80 ntBASIC1.98□□□□□ -2.09
RNF40O75150 RNU1-141P-201ENST00000364623 158 ntBASIC1.97□□□□□ -2.09
RNF40O75150 RNA5SP117-201ENST00000365294 118 ntBASIC1.97□□□□□ -2.09
RNF40O75150 AC108667.1-201ENST00000428618 249 ntBASIC1.97□□□□□ -2.09
RNF40O75150 AC003989.2-201ENST00000440224 169 ntBASIC1.97□□□□□ -2.09
RNF40O75150 RNU7-174P-201ENST00000516248 59 ntBASIC1.97□□□□□ -2.09
RNF40O75150 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF40O75150 RNA5SP47-201ENST00000517230 109 ntBASIC1.96□□□□□ -2.1
RNF40O75150 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
RNF40O75150 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.96□□□□□ -2.1
RNF40O75150 SNORD18A-201ENST00000363753 72 ntBASIC1.95□□□□□ -2.1
RNF40O75150 MIR630-201ENST00000384957 97 ntBASIC1.95□□□□□ -2.1
RNF40O75150 SNORA17.3-201ENST00000391159 129 ntBASIC1.95□□□□□ -2.1
RNF40O75150 MIR4498-201ENST00000577599 66 ntBASIC1.95□□□□□ -2.1
RNF40O75150 U2.7-201ENST00000619197 100 ntBASIC1.95□□□□□ -2.1
RNF40O75150 U4.4-201ENST00000620626 117 ntBASIC1.95□□□□□ -2.1
RNF40O75150 RNU6-1162P-201ENST00000384443 104 ntBASIC1.94□□□□□ -2.1
RNF40O75150 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RNF40O75150 Y_RNA.633-201ENST00000459107 95 ntBASIC1.94□□□□□ -2.1
RNF40O75150 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RNF40O75150 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RNF40O75150 RNU6-698P-201ENST00000363523 107 ntBASIC1.93□□□□□ -2.1
RNF40O75150 RNU6-34P-201ENST00000364874 107 ntBASIC1.93□□□□□ -2.1
RNF40O75150 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
RNF40O75150 RNA5SP190-201ENST00000365222 118 ntBASIC1.93□□□□□ -2.1
RNF40O75150 RNU6-1053P-201ENST00000515930 101 ntBASIC1.93□□□□□ -2.1
RNF40O75150 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
RNF40O75150 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.93□□□□□ -2.1
RNF40O75150 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
RNF40O75150 SNORD13-201ENST00000459299 104 ntBASIC1.92□□□□□ -2.1
RNF40O75150 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
RNF40O75150 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
RNF40O75150 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RNF40O75150 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RNF40O75150 SNORD114-4-201ENST00000363962 75 ntBASIC1.91□□□□□ -2.1
RNF40O75150 snoU13.13-201ENST00000458842 104 ntBASIC1.91□□□□□ -2.1
RNF40O75150 SNORA70.22-201ENST00000517160 124 ntBASIC1.91□□□□□ -2.1
RNF40O75150 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RNF40O75150 RNU6-1312P-201ENST00000362425 108 ntBASIC1.9□□□□□ -2.11
RNF40O75150 RNA5SP363-201ENST00000365072 115 ntBASIC1.9□□□□□ -2.11
RNF40O75150 SNORA8.2-201ENST00000384372 139 ntBASIC1.9□□□□□ -2.11
RNF40O75150 MIR9-3-201ENST00000385084 90 ntBASIC1.9□□□□□ -2.11
RNF40O75150 RNU6-269P-201ENST00000391077 97 ntBASIC1.9□□□□□ -2.11
RNF40O75150 AC002429.1-201ENST00000437672 148 ntBASIC1.9□□□□□ -2.11
RNF40O75150 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
RNF40O75150 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
RNF40O75150 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.9□□□□□ -2.11
RNF40O75150 RNA5SP484-201ENST00000458857 111 ntBASIC1.89□□□□□ -2.11
RNF40O75150 RNU5B-6P-201ENST00000516765 68 ntBASIC1.89□□□□□ -2.11
RNF40O75150 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RNF40O75150 MIR378A-201ENST00000362177 66 ntBASIC1.88□□□□□ -2.11
RNF40O75150 MIR517B-201ENST00000385102 67 ntBASIC1.88□□□□□ -2.11
RNF40O75150 AC021146.9-201ENST00000512503 156 ntBASIC1.88□□□□□ -2.11
RNF40O75150 RNU6-469P-201ENST00000516253 101 ntBASIC1.88□□□□□ -2.11
RNF40O75150 RNU6-1110P-201ENST00000516462 101 ntBASIC1.88□□□□□ -2.11
RNF40O75150 snoU13.31-201ENST00000607291 104 ntBASIC1.88□□□□□ -2.11
RNF40O75150 SNORD113-2-201ENST00000391082 72 ntBASIC1.87□□□□□ -2.11
RNF40O75150 MIR548L-201ENST00000408303 86 ntBASIC1.87□□□□□ -2.11
RNF40O75150 RNU4-88P-201ENST00000411220 86 ntBASIC1.87□□□□□ -2.11
RNF40O75150 AL162376.1-201ENST00000624117 175 ntBASIC1.87□□□□□ -2.11
RNF40O75150 RNU6-716P-201ENST00000365621 103 ntBASIC1.86□□□□□ -2.11
RNF40O75150 RNU6-520P-201ENST00000384717 104 ntBASIC1.86□□□□□ -2.11
RNF40O75150 SNORA33.1-201ENST00000364957 130 ntBASIC1.85□□□□□ -2.11
RNF40O75150 Y_RNA.379-201ENST00000365653 102 ntBASIC1.85□□□□□ -2.11
RNF40O75150 SNORD105-201ENST00000386910 85 ntBASIC1.85□□□□□ -2.11
RNF40O75150 SCARNA16.5-201ENST00000517114 183 ntBASIC1.85□□□□□ -2.11
RNF40O75150 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.85□□□□□ -2.11
RNF40O75150 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RNF40O75150 Y_RNA.125-201ENST00000363371 111 ntBASIC1.84□□□□□ -2.11
RNF40O75150 MIR548C-201ENST00000384815 97 ntBASIC1.84□□□□□ -2.11
RNF40O75150 RNU1-92P-201ENST00000517017 135 ntBASIC1.84□□□□□ -2.11
RNF40O75150 Y_RNA.226-201ENST00000364337 114 ntBASIC1.83□□□□□ -2.12
RNF40O75150 SNORA15B-2-201ENST00000384058 135 ntBASIC1.83□□□□□ -2.12
RNF40O75150 SNORA15B-1-201ENST00000384334 135 ntBASIC1.83□□□□□ -2.12
RNF40O75150 MIR517C-201ENST00000385103 95 ntBASIC1.83□□□□□ -2.12
RNF40O75150 MIR758-201ENST00000390227 88 ntBASIC1.83□□□□□ -2.12
RNF40O75150 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.83□□□□□ -2.12
RNF40O75150 MIR3678-201ENST00000578455 94 ntBASIC1.83□□□□□ -2.12
RNF40O75150 MIR6828-201ENST00000636181 60 ntBASIC1.83□□□□□ -2.12
RNF40O75150 SNORA63.6-201ENST00000364921 119 ntBASIC1.82□□□□□ -2.12
RNF40O75150 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
RNF40O75150 U7.7-201ENST00000459276 60 ntBASIC1.82□□□□□ -2.12
RNF40O75150 MIR582-201ENST00000365731 98 ntBASIC1.81□□□□□ -2.12
RNF40O75150 SNORA41B-201ENST00000384785 128 ntBASIC1.81□□□□□ -2.12
RNF40O75150 MIR573-201ENST00000384964 99 ntBASIC1.81□□□□□ -2.12
RNF40O75150 SCARNA17.3-201ENST00000516381 125 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms