Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SNORD114-4-201ENST00000363962 75 ntBASIC1.91□□□□□ -2.1
ACTN4O43707 RNU6-808P-201ENST00000391233 108 ntBASIC1.91□□□□□ -2.1
ACTN4O43707 MIR4769-201ENST00000584126 77 ntBASIC1.91□□□□□ -2.1
ACTN4O43707 AC084768.2-201ENST00000622736 221 ntBASIC1.91□□□□□ -2.1
ACTN4O43707 Y_RNA.250-201ENST00000364542 110 ntBASIC1.9□□□□□ -2.11
ACTN4O43707 MIR222-201ENST00000384992 110 ntBASIC1.9□□□□□ -2.11
ACTN4O43707 SNORD12-201ENST00000391002 90 ntBASIC1.9□□□□□ -2.11
ACTN4O43707 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
ACTN4O43707 RNU6-548P-201ENST00000517083 115 ntBASIC1.89□□□□□ -2.11
ACTN4O43707 MIR8081-201ENST00000611533 95 ntBASIC1.89□□□□□ -2.11
ACTN4O43707 RNU1-141P-201ENST00000364623 158 ntBASIC1.88□□□□□ -2.11
ACTN4O43707 RNU6-936P-201ENST00000384005 107 ntBASIC1.88□□□□□ -2.11
ACTN4O43707 MIR583-201ENST00000384846 75 ntBASIC1.88□□□□□ -2.11
ACTN4O43707 SNORA75.1-201ENST00000391130 148 ntBASIC1.88□□□□□ -2.11
ACTN4O43707 MIR1289-2-201ENST00000408360 111 ntBASIC1.88□□□□□ -2.11
ACTN4O43707 AL157398.1-201ENST00000452981 186 ntBASIC1.88□□□□□ -2.11
ACTN4O43707 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
ACTN4O43707 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ACTN4O43707 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ACTN4O43707 SNORD60.1-201ENST00000362451 73 ntBASIC1.87□□□□□ -2.11
ACTN4O43707 RNU6-716P-201ENST00000365621 103 ntBASIC1.87□□□□□ -2.11
ACTN4O43707 AC015712.3-201ENST00000559380 164 ntBASIC1.87□□□□□ -2.11
ACTN4O43707 RNU6-726P-201ENST00000364680 107 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 MIR630-201ENST00000384957 97 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 SNORD89-201ENST00000390981 114 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 AL591806.2-201ENST00000433122 173 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 AC002429.1-201ENST00000437672 148 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 snoU13.13-201ENST00000458842 104 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 RNU5B-6P-201ENST00000516765 68 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 MIR4255-201ENST00000579351 72 ntBASIC1.86□□□□□ -2.11
ACTN4O43707 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ACTN4O43707 SNORD18A-201ENST00000363753 72 ntBASIC1.85□□□□□ -2.11
ACTN4O43707 RNA5SP363-201ENST00000365072 115 ntBASIC1.85□□□□□ -2.11
ACTN4O43707 MIR521-2-201ENST00000384818 87 ntBASIC1.85□□□□□ -2.11
ACTN4O43707 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ACTN4O43707 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
ACTN4O43707 SNORD113-4-201ENST00000364802 75 ntBASIC1.83□□□□□ -2.12
ACTN4O43707 SNORD105-201ENST00000386910 85 ntBASIC1.83□□□□□ -2.12
ACTN4O43707 SNORA26.9-201ENST00000391322 122 ntBASIC1.83□□□□□ -2.12
ACTN4O43707 RNU6-1110P-201ENST00000516462 101 ntBASIC1.83□□□□□ -2.12
ACTN4O43707 RNA5SP47-201ENST00000517230 109 ntBASIC1.83□□□□□ -2.12
ACTN4O43707 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.83□□□□□ -2.12
ACTN4O43707 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.83□□□□□ -2.12
ACTN4O43707 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ACTN4O43707 MIR517B-201ENST00000385102 67 ntBASIC1.82□□□□□ -2.12
ACTN4O43707 RNU6-269P-201ENST00000391077 97 ntBASIC1.82□□□□□ -2.12
ACTN4O43707 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
ACTN4O43707 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
ACTN4O43707 SNORA8.2-201ENST00000384372 139 ntBASIC1.81□□□□□ -2.12
ACTN4O43707 SNORD113-2-201ENST00000391082 72 ntBASIC1.81□□□□□ -2.12
ACTN4O43707 AC021146.9-201ENST00000512503 156 ntBASIC1.81□□□□□ -2.12
ACTN4O43707 MIR3678-201ENST00000578455 94 ntBASIC1.8□□□□□ -2.12
ACTN4O43707 FABP5P4-201ENST00000437203 171 ntBASIC1.79□□□□□ -2.12
ACTN4O43707 RNA5SP484-201ENST00000458857 111 ntBASIC1.79□□□□□ -2.12
ACTN4O43707 RNU1-92P-201ENST00000517017 135 ntBASIC1.79□□□□□ -2.12
ACTN4O43707 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.79□□□□□ -2.12
ACTN4O43707 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ACTN4O43707 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.78□□□□□ -2.12
ACTN4O43707 SNORA15B-2-201ENST00000384058 135 ntBASIC1.78□□□□□ -2.12
ACTN4O43707 SNORA15B-1-201ENST00000384334 135 ntBASIC1.78□□□□□ -2.12
ACTN4O43707 RNU6-1184P-201ENST00000384588 108 ntBASIC1.78□□□□□ -2.12
ACTN4O43707 U7.7-201ENST00000459276 60 ntBASIC1.78□□□□□ -2.12
ACTN4O43707 RNA5SP458-201ENST00000516188 119 ntBASIC1.78□□□□□ -2.12
ACTN4O43707 RNU6-698P-201ENST00000363523 107 ntBASIC1.77□□□□□ -2.13
ACTN4O43707 RNU6-34P-201ENST00000364874 107 ntBASIC1.77□□□□□ -2.13
ACTN4O43707 SNORA25-201ENST00000384384 134 ntBASIC1.77□□□□□ -2.13
ACTN4O43707 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.77□□□□□ -2.13
ACTN4O43707 SCARNA16.5-201ENST00000517114 183 ntBASIC1.77□□□□□ -2.13
ACTN4O43707 U2.7-201ENST00000619197 100 ntBASIC1.77□□□□□ -2.13
ACTN4O43707 uc_338.10-201ENST00000621872 182 ntBASIC1.77□□□□□ -2.13
ACTN4O43707 RNU6-997P-201ENST00000384725 107 ntBASIC1.76□□□□□ -2.13
ACTN4O43707 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
ACTN4O43707 RNU7-174P-201ENST00000516248 59 ntBASIC1.76□□□□□ -2.13
ACTN4O43707 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.76□□□□□ -2.13
ACTN4O43707 MIR758-201ENST00000390227 88 ntBASIC1.75□□□□□ -2.13
ACTN4O43707 MIR3612-201ENST00000579753 87 ntBASIC1.75□□□□□ -2.13
ACTN4O43707 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
ACTN4O43707 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
ACTN4O43707 RNU6-1312P-201ENST00000362425 108 ntBASIC1.74□□□□□ -2.13
ACTN4O43707 SNORA33.1-201ENST00000364957 130 ntBASIC1.74□□□□□ -2.13
ACTN4O43707 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
ACTN4O43707 MIR573-201ENST00000384964 99 ntBASIC1.73□□□□□ -2.13
ACTN4O43707 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
ACTN4O43707 SNORA25.15-201ENST00000516487 89 ntBASIC1.73□□□□□ -2.13
ACTN4O43707 RNA5SP327-201ENST00000362494 101 ntBASIC1.72□□□□□ -2.13
ACTN4O43707 Y_RNA.125-201ENST00000363371 111 ntBASIC1.72□□□□□ -2.13
ACTN4O43707 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ACTN4O43707 MIR764-201ENST00000390811 85 ntBASIC1.72□□□□□ -2.13
ACTN4O43707 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
ACTN4O43707 SNORA63.6-201ENST00000364921 119 ntBASIC1.71□□□□□ -2.14
ACTN4O43707 Y_RNA.407-201ENST00000383986 113 ntBASIC1.71□□□□□ -2.14
ACTN4O43707 Y_RNA.633-201ENST00000459107 95 ntBASIC1.71□□□□□ -2.14
ACTN4O43707 SCARNA17.3-201ENST00000516381 125 ntBASIC1.71□□□□□ -2.14
ACTN4O43707 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
ACTN4O43707 U4.4-201ENST00000620626 117 ntBASIC1.71□□□□□ -2.14
ACTN4O43707 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
ACTN4O43707 RNU6-520P-201ENST00000384717 104 ntBASIC1.7□□□□□ -2.14
ACTN4O43707 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.7□□□□□ -2.14
ACTN4O43707 AL162376.1-201ENST00000624117 175 ntBASIC1.7□□□□□ -2.14
ACTN4O43707 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms