Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-990P-201ENST00000364385 104 ntBASIC-1.62□□□□□ -2.67
SGCEO43556 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.62□□□□□ -2.67
SGCEO43556 MIR507-201ENST00000385234 94 ntBASIC-1.62□□□□□ -2.67
SGCEO43556 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.62□□□□□ -2.67
SGCEO43556 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.63□□□□□ -2.67
SGCEO43556 RNU6-924P-201ENST00000362926 108 ntBASIC-1.63□□□□□ -2.67
SGCEO43556 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.63□□□□□ -2.67
SGCEO43556 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.63□□□□□ -2.67
SGCEO43556 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.63□□□□□ -2.67
SGCEO43556 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.63□□□□□ -2.67
SGCEO43556 FGF7P7-201ENST00000514120 227 ntBASIC-1.63□□□□□ -2.67
SGCEO43556 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 RNU6-275P-201ENST00000364910 107 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 SNORA7.5-201ENST00000410672 110 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 AP002795.1-201ENST00000534879 84 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 MIR3163-201ENST00000581592 73 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 MIR4723-201ENST00000585070 81 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 AL512310.12-203ENST00000640543 90 ntBASIC-1.64□□□□□ -2.67
SGCEO43556 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 SNORD115-27-201ENST00000364430 82 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 RNU6-119P-201ENST00000364882 107 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 MIR548H3-201ENST00000408771 118 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 RNU6-168P-201ENST00000516189 101 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 RNU6-988P-201ENST00000519081 107 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 AC108081.1-201ENST00000604358 221 ntBASIC-1.65□□□□□ -2.67
SGCEO43556 MIR369-201ENST00000362155 70 ntBASIC-1.66□□□□□ -2.68
SGCEO43556 RNU6-309P-201ENST00000364573 106 ntBASIC-1.66□□□□□ -2.68
SGCEO43556 SNORA75.5-201ENST00000391291 81 ntBASIC-1.66□□□□□ -2.68
SGCEO43556 RPL35AP4-201ENST00000412007 102 ntBASIC-1.66□□□□□ -2.68
SGCEO43556 RNU7-24P-201ENST00000458867 62 ntBASIC-1.66□□□□□ -2.68
SGCEO43556 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.66□□□□□ -2.68
SGCEO43556 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.67□□□□□ -2.68
SGCEO43556 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.67□□□□□ -2.68
SGCEO43556 AC090616.4-201ENST00000448026 115 ntBASIC-1.67□□□□□ -2.68
SGCEO43556 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.67□□□□□ -2.68
SGCEO43556 RNY3P16-201ENST00000516338 101 ntBASIC-1.67□□□□□ -2.68
SGCEO43556 AC113195.1-201ENST00000579952 141 ntBASIC-1.67□□□□□ -2.68
SGCEO43556 SNORA63.2-201ENST00000362603 126 ntBASIC-1.68□□□□□ -2.68
SGCEO43556 RNA5SP405-201ENST00000363059 114 ntBASIC-1.68□□□□□ -2.68
SGCEO43556 SNORD42.2-201ENST00000365570 69 ntBASIC-1.68□□□□□ -2.68
SGCEO43556 MT-TM-201ENST00000387377 68 ntBASIC-1.68□□□□□ -2.68
SGCEO43556 AC021753.1-201ENST00000635724 168 ntBASIC-1.68□□□□□ -2.68
SGCEO43556 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.69□□□□□ -2.68
SGCEO43556 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.69□□□□□ -2.68
SGCEO43556 SNORA24B-201ENST00000384176 131 ntBASIC-1.69□□□□□ -2.68
SGCEO43556 MIR548A1-201ENST00000385041 97 ntBASIC-1.69□□□□□ -2.68
SGCEO43556 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.69□□□□□ -2.68
SGCEO43556 RNU6-363P-201ENST00000362895 105 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 SNORD18B-201ENST00000365659 72 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 RNU6-493P-201ENST00000391321 108 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 RNU6-65P-201ENST00000516332 98 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 RNU6-875P-201ENST00000516488 106 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.7□□□□□ -2.68
SGCEO43556 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 MIR1255B2-201ENST00000408618 67 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 MIR4643-201ENST00000577473 78 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 MIR4536-1-201ENST00000583537 88 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 MIR3140-201ENST00000583685 90 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.71□□□□□ -2.68
SGCEO43556 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 MIR759-201ENST00000390224 91 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 RNU6-400P-201ENST00000391173 106 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 MTND1P19-201ENST00000511780 315 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 AL442128.1-201ENST00000615151 90 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 AC139792.2-201ENST00000624218 587 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 U6.106-201ENST00000636360 105 ntBASIC-1.72□□□□□ -2.68
SGCEO43556 SNORD50.2-201ENST00000365465 70 ntBASIC-1.73□□□□□ -2.69
SGCEO43556 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.73□□□□□ -2.69
SGCEO43556 AL353691.2-201ENST00000443795 59 ntBASIC-1.73□□□□□ -2.69
SGCEO43556 RNU7-85P-201ENST00000458851 63 ntBASIC-1.73□□□□□ -2.69
SGCEO43556 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.73□□□□□ -2.69
SGCEO43556 RNA5SP93-201ENST00000362525 114 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 RNU6-194P-201ENST00000363862 105 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 SNORA33.1-201ENST00000364957 130 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 RNU6-132P-201ENST00000383863 107 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 RNU6-80P-201ENST00000384195 107 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 MIR3646-201ENST00000578301 84 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 AC025521.1-201ENST00000621624 286 ntBASIC-1.74□□□□□ -2.69
SGCEO43556 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.74□□□□□ -2.69
SGCEO43556 RNU6-79P-201ENST00000362511 107 ntBASIC-1.75□□□□□ -2.69
SGCEO43556 MIR548D2-201ENST00000384955 97 ntBASIC-1.75□□□□□ -2.69
SGCEO43556 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
SGCEO43556 RNU4-88P-201ENST00000411220 86 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms