Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RNU6-495P-201ENST00000362995 107 ntBASIC-1.17□□□□□ -2.6
CLOCKO15516 SNORD50.2-201ENST00000365465 70 ntBASIC-1.17□□□□□ -2.6
CLOCKO15516 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.17□□□□□ -2.6
CLOCKO15516 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.17□□□□□ -2.6
CLOCKO15516 RNU7-85P-201ENST00000458851 63 ntBASIC-1.17□□□□□ -2.6
CLOCKO15516 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.17□□□□□ -2.6
CLOCKO15516 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 RNU6-990P-201ENST00000364385 104 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 SNORA62.4-201ENST00000365504 151 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 MIR124-2-201ENST00000385081 109 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 RNU6-65P-201ENST00000516332 98 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 snoU83B.1-201ENST00000517136 88 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 RNU6-111P-201ENST00000517179 105 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 MIR3115-201ENST00000577915 68 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 MIR3128-201ENST00000581957 66 ntBASIC-1.18□□□□□ -2.6
CLOCKO15516 SNORD114-17-201ENST00000364699 75 ntBASIC-1.19□□□□□ -2.6
CLOCKO15516 RNU4-11P-201ENST00000365287 132 ntBASIC-1.19□□□□□ -2.6
CLOCKO15516 RNU6-132P-201ENST00000383863 107 ntBASIC-1.19□□□□□ -2.6
CLOCKO15516 YWHAEP3-201ENST00000582767 121 ntBASIC-1.19□□□□□ -2.6
CLOCKO15516 MIR4536-1-201ENST00000583537 88 ntBASIC-1.19□□□□□ -2.6
CLOCKO15516 AC141273.2-201ENST00000618989 130 ntBASIC-1.19□□□□□ -2.6
CLOCKO15516 SNORA63.2-201ENST00000362603 126 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 SNORA24B-201ENST00000384176 131 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 RNU6-816P-201ENST00000390914 107 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 AC021146.9-201ENST00000512503 156 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 MIR4464-201ENST00000580818 92 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 MIR3140-201ENST00000583685 90 ntBASIC-1.2□□□□□ -2.6
CLOCKO15516 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.21□□□□□ -2.6
CLOCKO15516 RNA5SP192-201ENST00000364404 120 ntBASIC-1.21□□□□□ -2.6
CLOCKO15516 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
CLOCKO15516 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.21□□□□□ -2.6
CLOCKO15516 RNU6-781P-201ENST00000516377 101 ntBASIC-1.21□□□□□ -2.6
CLOCKO15516 SNORA81.3-201ENST00000517283 198 ntBASIC-1.21□□□□□ -2.6
CLOCKO15516 AC090617.8-201ENST00000623339 167 ntBASIC-1.21□□□□□ -2.6
CLOCKO15516 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.22□□□□□ -2.6
CLOCKO15516 RNU7-134P-201ENST00000458997 64 ntBASIC-1.22□□□□□ -2.6
CLOCKO15516 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.22□□□□□ -2.6
CLOCKO15516 RNU6-479P-201ENST00000516348 105 ntBASIC-1.22□□□□□ -2.6
CLOCKO15516 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.22□□□□□ -2.6
CLOCKO15516 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.22□□□□□ -2.6
CLOCKO15516 RNU6-706P-201ENST00000517229 104 ntBASIC-1.22□□□□□ -2.6
CLOCKO15516 RNU6-208P-201ENST00000362431 107 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 MIR577-201ENST00000385196 96 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 RNU7-24P-201ENST00000458867 62 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 AC026421.1-201ENST00000519101 163 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 AL513043.2-201ENST00000573941 143 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 AC072026.1-201ENST00000605023 201 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.23□□□□□ -2.61
CLOCKO15516 U6.96-201ENST00000636425 70 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 AC132825.6-201ENST00000638861 357 ntBASIC-1.23□□□□□ -2.61
CLOCKO15516 RNY4P6-201ENST00000363667 96 ntBASIC-1.24□□□□□ -2.61
CLOCKO15516 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.24□□□□□ -2.61
CLOCKO15516 RNU6-867P-201ENST00000364956 107 ntBASIC-1.24□□□□□ -2.61
CLOCKO15516 SNORD75.2-201ENST00000408784 58 ntBASIC-1.24□□□□□ -2.61
CLOCKO15516 MIR3165-201ENST00000579874 75 ntBASIC-1.24□□□□□ -2.61
CLOCKO15516 MIR3064-201ENST00000581130 66 ntBASIC-1.24□□□□□ -2.61
CLOCKO15516 AL353803.5-201ENST00000599815 141 ntBASIC-1.24□□□□□ -2.61
CLOCKO15516 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 RNU4-32P-201ENST00000363404 141 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 SNX3P1X-201ENST00000414887 175 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 AC138207.3-201ENST00000585289 166 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 MIR6888-201ENST00000621977 67 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 MIR4320-201ENST00000636981 65 ntBASIC-1.25□□□□□ -2.61
CLOCKO15516 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 SNORA20.1-201ENST00000364790 130 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 AL158147.1-201ENST00000443970 75 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 AC068339.1-201ENST00000526965 141 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 MIR4694-201ENST00000578534 80 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 AC008737.2-201ENST00000599446 118 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 AL445584.3-201ENST00000617173 78 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 AP001340.1-201ENST00000624405 217 ntBASIC-1.26□□□□□ -2.61
CLOCKO15516 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.27□□□□□ -2.61
CLOCKO15516 RNU6-151P-201ENST00000364158 107 ntBASIC-1.27□□□□□ -2.61
CLOCKO15516 MIR548A1-201ENST00000385041 97 ntBASIC-1.27□□□□□ -2.61
CLOCKO15516 MIR548U-201ENST00000390728 81 ntBASIC-1.27□□□□□ -2.61
CLOCKO15516 MIR8485-201ENST00000401372 91 ntBASIC-1.27□□□□□ -2.61
CLOCKO15516 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.27□□□□□ -2.61
CLOCKO15516 AC104996.3-201ENST00000590718 94 ntBASIC-1.27□□□□□ -2.61
CLOCKO15516 AC062037.2-201ENST00000610137 73 ntBASIC-1.27□□□□□ -2.61
CLOCKO15516 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.27□□□□□ -2.61
CLOCKO15516 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.28□□□□□ -2.61
CLOCKO15516 MIR606-201ENST00000384851 96 ntBASIC-1.28□□□□□ -2.61
CLOCKO15516 MIR568-201ENST00000385036 95 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms