Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.15□□□□□ -2.59
UPK2O00526 MIR548H3-201ENST00000408771 118 ntBASIC-1.15□□□□□ -2.59
UPK2O00526 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.15□□□□□ -2.59
UPK2O00526 SNORD127-201ENST00000458892 86 ntBASIC-1.15□□□□□ -2.59
UPK2O00526 AP002795.1-201ENST00000534879 84 ntBASIC-1.15□□□□□ -2.59
UPK2O00526 MIR3646-201ENST00000578301 84 ntBASIC-1.15□□□□□ -2.59
UPK2O00526 MIR3064-201ENST00000581130 66 ntBASIC-1.15□□□□□ -2.59
UPK2O00526 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 MIR1255B2-201ENST00000408618 67 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 MTND2P23-201ENST00000422990 651 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 AC107027.2-201ENST00000512197 115 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 MIR5591-201ENST00000578248 65 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 MIR3121-201ENST00000579680 77 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 MIR3165-201ENST00000579874 75 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 MIR3658-201ENST00000636291 56 ntBASIC-1.16□□□□□ -2.6
UPK2O00526 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 RNU6-924P-201ENST00000362926 108 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 MIR587-201ENST00000384845 96 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 RNU6-576P-201ENST00000390854 102 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 SNORD58.1-201ENST00000391313 66 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
UPK2O00526 RNU2-38P-201ENST00000410856 79 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 RNU7-121P-201ENST00000516604 62 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 MIR4536-1-201ENST00000583537 88 ntBASIC-1.17□□□□□ -2.6
UPK2O00526 SNORA33.2-201ENST00000365413 134 ntBASIC-1.18□□□□□ -2.6
UPK2O00526 RNU6-918P-201ENST00000391219 106 ntBASIC-1.18□□□□□ -2.6
UPK2O00526 HLA-S-202ENST00000425174 53 ntBASIC-1.18□□□□□ -2.6
UPK2O00526 CYP3A54P-201ENST00000566950 75 ntBASIC-1.18□□□□□ -2.6
UPK2O00526 AL513043.2-201ENST00000573941 143 ntBASIC-1.18□□□□□ -2.6
UPK2O00526 MIR4770-201ENST00000579149 58 ntBASIC-1.18□□□□□ -2.6
UPK2O00526 RNU6-164P-201ENST00000364604 103 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 RNU6-382P-201ENST00000365181 106 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 RNU6-639P-201ENST00000384074 107 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 RNU6-260P-201ENST00000384092 107 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.19□□□□□ -2.6
UPK2O00526 RNU7-197P-201ENST00000458836 62 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 RNU6-65P-201ENST00000516332 98 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 MIR548AG1-201ENST00000579932 66 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 MIR6129-201ENST00000616087 109 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 MIR6874-201ENST00000635894 71 ntBASIC-1.19□□□□□ -2.6
UPK2O00526 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 RNU6-409P-201ENST00000384114 104 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 SNORD19-201ENST00000391191 68 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 SNORD57-201ENST00000448188 72 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 MIR4520-1-201ENST00000582609 70 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 MIR4801-201ENST00000582704 82 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 AC104996.3-201ENST00000590718 94 ntBASIC-1.2□□□□□ -2.6
UPK2O00526 SNORA2.1-201ENST00000363089 137 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU6-824P-201ENST00000363724 104 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU6-226P-201ENST00000363778 107 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU6-80P-201ENST00000384195 107 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 MIR577-201ENST00000385196 96 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNA5SP292-201ENST00000390974 118 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU4-61P-201ENST00000411243 107 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU7-154P-201ENST00000516194 62 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 MIR3613-201ENST00000579844 87 ntBASIC-1.21□□□□□ -2.6
UPK2O00526 RNU6-246P-201ENST00000384702 107 ntBASIC-1.22□□□□□ -2.6
UPK2O00526 MIR519A2-201ENST00000384990 87 ntBASIC-1.22□□□□□ -2.6
UPK2O00526 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
UPK2O00526 RNA5SP86-201ENST00000390869 98 ntBASIC-1.22□□□□□ -2.6
UPK2O00526 SNORD4B-201ENST00000459083 72 ntBASIC-1.22□□□□□ -2.6
UPK2O00526 RNA5SP147-201ENST00000516493 109 ntBASIC-1.22□□□□□ -2.6
UPK2O00526 MIR3657-201ENST00000584818 117 ntBASIC-1.22□□□□□ -2.6
UPK2O00526 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.23□□□□□ -2.61
UPK2O00526 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.23□□□□□ -2.61
UPK2O00526 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.23□□□□□ -2.61
UPK2O00526 SNORD37.2-201ENST00000391075 66 ntBASIC-1.23□□□□□ -2.61
UPK2O00526 AL353691.2-201ENST00000443795 59 ntBASIC-1.23□□□□□ -2.61
UPK2O00526 RNU6-732P-201ENST00000516033 103 ntBASIC-1.23□□□□□ -2.61
UPK2O00526 RNU6-412P-201ENST00000516434 106 ntBASIC-1.23□□□□□ -2.61
UPK2O00526 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 RNU6-312P-201ENST00000364629 107 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 MIR203A-201ENST00000384836 110 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 RNA5SP136-201ENST00000410906 107 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 RNU6-62P-201ENST00000516526 102 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 SNORA81.3-201ENST00000517283 198 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 AC130289.1-201ENST00000577321 73 ntBASIC-1.24□□□□□ -2.61
UPK2O00526 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.25□□□□□ -2.61
UPK2O00526 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.25□□□□□ -2.61
UPK2O00526 MIR521-2-201ENST00000384818 87 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms