Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU4-11P-201ENST00000365287 132 ntBASIC-1.52□□□□□ -2.65
DFFAO00273 RNU6-460P-201ENST00000391158 108 ntBASIC-1.52□□□□□ -2.65
DFFAO00273 RNU6-111P-201ENST00000517179 105 ntBASIC-1.52□□□□□ -2.65
DFFAO00273 AC025521.1-201ENST00000621624 286 ntBASIC-1.52□□□□□ -2.65
DFFAO00273 SNORA62.4-201ENST00000365504 151 ntBASIC-1.53□□□□□ -2.65
DFFAO00273 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.53□□□□□ -2.65
DFFAO00273 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.53□□□□□ -2.65
DFFAO00273 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.53□□□□□ -2.65
DFFAO00273 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.53□□□□□ -2.65
DFFAO00273 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.54□□□□□ -2.66
DFFAO00273 RNU6-816P-201ENST00000390914 107 ntBASIC-1.54□□□□□ -2.66
DFFAO00273 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.54□□□□□ -2.66
DFFAO00273 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.54□□□□□ -2.66
DFFAO00273 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.54□□□□□ -2.66
DFFAO00273 MIR3165-201ENST00000579874 75 ntBASIC-1.54□□□□□ -2.66
DFFAO00273 RNU6-495P-201ENST00000362995 107 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 RNA5SP192-201ENST00000364404 120 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 SNORD114-17-201ENST00000364699 75 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 SNORD50.2-201ENST00000365465 70 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 MIR124-2-201ENST00000385081 109 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 RNA5SP470-201ENST00000516463 106 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 MIR378F-201ENST00000578143 78 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 AC072026.1-201ENST00000605023 201 ntBASIC-1.55□□□□□ -2.66
DFFAO00273 RNU4-32P-201ENST00000363404 141 ntBASIC-1.56□□□□□ -2.66
DFFAO00273 RNY4P6-201ENST00000363667 96 ntBASIC-1.56□□□□□ -2.66
DFFAO00273 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.56□□□□□ -2.66
DFFAO00273 SNORA63.2-201ENST00000362603 126 ntBASIC-1.57□□□□□ -2.66
DFFAO00273 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.57□□□□□ -2.66
DFFAO00273 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.57□□□□□ -2.66
DFFAO00273 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.57□□□□□ -2.66
DFFAO00273 YWHAEP3-201ENST00000582767 121 ntBASIC-1.57□□□□□ -2.66
DFFAO00273 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.58□□□□□ -2.66
DFFAO00273 SNORA20.1-201ENST00000364790 130 ntBASIC-1.58□□□□□ -2.66
DFFAO00273 RNU7-85P-201ENST00000458851 63 ntBASIC-1.58□□□□□ -2.66
DFFAO00273 AC021146.9-201ENST00000512503 156 ntBASIC-1.58□□□□□ -2.66
DFFAO00273 AC008737.2-201ENST00000599446 118 ntBASIC-1.58□□□□□ -2.66
DFFAO00273 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.59□□□□□ -2.66
DFFAO00273 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.59□□□□□ -2.66
DFFAO00273 AC141273.2-201ENST00000618989 130 ntBASIC-1.59□□□□□ -2.66
DFFAO00273 U6.96-201ENST00000636425 70 ntBASIC-1.59□□□□□ -2.66
DFFAO00273 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 RNU6-208P-201ENST00000362431 107 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 RNU6-990P-201ENST00000364385 104 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 RNU6-132P-201ENST00000383863 107 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
DFFAO00273 RNA5SP266-201ENST00000410273 108 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 RNU6-781P-201ENST00000516377 101 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 snoU83B.1-201ENST00000517136 88 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 AC062037.2-201ENST00000610137 73 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 MIR4320-201ENST00000636981 65 ntBASIC-1.6□□□□□ -2.67
DFFAO00273 MIR577-201ENST00000385196 96 ntBASIC-1.61□□□□□ -2.67
DFFAO00273 MIR548U-201ENST00000390728 81 ntBASIC-1.61□□□□□ -2.67
DFFAO00273 MIR4464-201ENST00000580818 92 ntBASIC-1.61□□□□□ -2.67
DFFAO00273 MIR3140-201ENST00000583685 90 ntBASIC-1.61□□□□□ -2.67
DFFAO00273 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.62□□□□□ -2.67
DFFAO00273 RNU6-867P-201ENST00000364956 107 ntBASIC-1.62□□□□□ -2.67
DFFAO00273 MIR606-201ENST00000384851 96 ntBASIC-1.62□□□□□ -2.67
DFFAO00273 RNU7-24P-201ENST00000458867 62 ntBASIC-1.62□□□□□ -2.67
DFFAO00273 AL513043.2-201ENST00000573941 143 ntBASIC-1.62□□□□□ -2.67
DFFAO00273 AC090617.8-201ENST00000623339 167 ntBASIC-1.62□□□□□ -2.67
DFFAO00273 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.62□□□□□ -2.67
DFFAO00273 RNU6-151P-201ENST00000364158 107 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 SNORA24B-201ENST00000384176 131 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 SNORD75.2-201ENST00000408784 58 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 AL158147.1-201ENST00000443970 75 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 SNORA81.3-201ENST00000517283 198 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 MIR3115-201ENST00000577915 68 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 AP001340.1-201ENST00000624405 217 ntBASIC-1.63□□□□□ -2.67
DFFAO00273 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 MIR1302-3-201ENST00000408128 138 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 MTCYBP9-201ENST00000431021 303 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 AC068339.1-201ENST00000526965 141 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 MIR4694-201ENST00000578534 80 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 MIR3064-201ENST00000581130 66 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 AL353803.5-201ENST00000599815 141 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.64□□□□□ -2.67
DFFAO00273 RNU6-797P-201ENST00000363101 109 ntBASIC-1.65□□□□□ -2.67
DFFAO00273 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.65□□□□□ -2.67
DFFAO00273 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.65□□□□□ -2.67
DFFAO00273 MIR513C-201ENST00000401352 84 ntBASIC-1.65□□□□□ -2.67
DFFAO00273 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.66□□□□□ -2.68
DFFAO00273 MIR548A1-201ENST00000385041 97 ntBASIC-1.66□□□□□ -2.68
DFFAO00273 AC104996.3-201ENST00000590718 94 ntBASIC-1.66□□□□□ -2.68
DFFAO00273 RNU6-832P-201ENST00000363319 107 ntBASIC-1.68□□□□□ -2.68
DFFAO00273 AC025166.1-201ENST00000612411 163 ntBASIC-1.68□□□□□ -2.68
DFFAO00273 MIR6888-201ENST00000621977 67 ntBASIC-1.68□□□□□ -2.68
DFFAO00273 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 MIR568-201ENST00000385036 95 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 MIR4439-201ENST00000583746 80 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 U7.2-201ENST00000607576 63 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 AL445584.3-201ENST00000617173 78 ntBASIC-1.69□□□□□ -2.68
DFFAO00273 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.7□□□□□ -2.68
DFFAO00273 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms