Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 RNU6-132P-201ENST00000383863 107 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 SNORD116-22-201ENST00000384430 92 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 Y_RNA.544-201ENST00000384650 113 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 MIR519C-201ENST00000385053 87 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 MIR643-201ENST00000385267 97 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 AL353813.1-201ENST00000440700 253 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 AC093423.1-201ENST00000440817 142 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 AC069113.3-201ENST00000521019 150 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 MIR4677-201ENST00000584153 80 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 RNU6-1244P-201ENST00000363614 108 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 Y_RNA.491-201ENST00000384417 107 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 RNU6-1052P-201ENST00000411398 104 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 RNU6-719P-201ENST00000516671 104 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 MIR4696-201ENST00000581431 70 ntBASIC0.26□□□□□ -2.37
SMCHD1A6NHR9 SNORD115-37-201ENST00000363768 82 ntBASIC0.25□□□□□ -2.37
SMCHD1A6NHR9 Y_RNA.283-201ENST00000364798 112 ntBASIC0.25□□□□□ -2.37
SMCHD1A6NHR9 Y_RNA.290-201ENST00000364879 114 ntBASIC0.25□□□□□ -2.37
SMCHD1A6NHR9 SNORA75.1-201ENST00000391130 148 ntBASIC0.25□□□□□ -2.37
SMCHD1A6NHR9 RNA5SP214-201ENST00000363378 118 ntBASIC0.25□□□□□ -2.37
SMCHD1A6NHR9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.25□□□□□ -2.37
SMCHD1A6NHR9 SNORD115-44-201ENST00000365391 82 ntBASIC0.24□□□□□ -2.37
SMCHD1A6NHR9 MIR548H2-201ENST00000408874 88 ntBASIC0.24□□□□□ -2.37
SMCHD1A6NHR9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.24□□□□□ -2.37
SMCHD1A6NHR9 AC012531.4-201ENST00000616509 177 ntBASIC0.24□□□□□ -2.37
SMCHD1A6NHR9 MIR20A-201ENST00000362279 71 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 RNA5SP292-201ENST00000390974 118 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 RNU6-935P-201ENST00000410371 100 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 RNU7-159P-201ENST00000459284 62 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 SNORA70.25-201ENST00000612741 95 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 RNA5SP403-201ENST00000363598 108 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 SNORD114-4-201ENST00000363962 75 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 SNORA51.5-201ENST00000384126 131 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 MIR451A-201ENST00000385059 72 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 RNU7-24P-201ENST00000458867 62 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SMCHD1A6NHR9 RNU6-756P-201ENST00000383997 107 ntBASIC0.22□□□□□ -2.37
SMCHD1A6NHR9 RNU6-519P-201ENST00000410590 108 ntBASIC0.22□□□□□ -2.37
SMCHD1A6NHR9 Y_RNA.649-201ENST00000459077 103 ntBASIC0.22□□□□□ -2.37
SMCHD1A6NHR9 SNORD114-9-201ENST00000364370 72 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 RNU6-813P-201ENST00000384691 107 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 RNU6-644P-201ENST00000391155 98 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 MIR892B-201ENST00000401279 77 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 MIR2113-201ENST00000459007 91 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 RNU6-287P-201ENST00000516230 98 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 MIR548AG2-201ENST00000581228 64 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 MTRNR2L2-201ENST00000604882 87 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 SNORA63.2-201ENST00000362603 126 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 Y_RNA.220-201ENST00000364244 109 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 RNU1-141P-201ENST00000364623 158 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 AL035461.1-201ENST00000421490 332 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 AC069271.1-201ENST00000445577 156 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 AC103810.7-201ENST00000607821 91 ntBASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
SMCHD1A6NHR9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
SMCHD1A6NHR9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.2□□□□□ -2.38
SMCHD1A6NHR9 TRDV1-202ENST00000621643 102 ntBASIC0.2□□□□□ -2.38
SMCHD1A6NHR9 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
SMCHD1A6NHR9 SNORD115-27-201ENST00000364430 82 ntBASIC0.2□□□□□ -2.38
SMCHD1A6NHR9 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
SMCHD1A6NHR9 SCARNA11.2-201ENST00000517183 154 ntBASIC0.2□□□□□ -2.38
SMCHD1A6NHR9 snoU13.17-201ENST00000458802 104 ntBASIC0.19□□□□□ -2.38
SMCHD1A6NHR9 MIR3925-201ENST00000584674 77 ntBASIC0.19□□□□□ -2.38
SMCHD1A6NHR9 RNU6-495P-201ENST00000362995 107 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 RNU6-811P-201ENST00000384069 107 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 MIR329-2-201ENST00000385029 84 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 MIR1302-5-201ENST00000408164 150 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 MIRLET7D-201ENST00000362263 87 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 RNU6-32P-201ENST00000383948 107 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 RNU6-13P-201ENST00000384248 107 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 RNU6-12P-201ENST00000384604 107 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 RNU6-41P-201ENST00000384741 107 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 AC006210.1-201ENST00000424882 111 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
SMCHD1A6NHR9 RNU6-979P-201ENST00000383896 107 ntBASIC0.17□□□□□ -2.38
SMCHD1A6NHR9 MIR106A-201ENST00000384870 81 ntBASIC0.17□□□□□ -2.38
SMCHD1A6NHR9 RNU5F-1-201ENST00000362507 117 ntBASIC0.16□□□□□ -2.38
SMCHD1A6NHR9 Y_RNA.371-201ENST00000365591 113 ntBASIC0.16□□□□□ -2.38
SMCHD1A6NHR9 MIR6739-201ENST00000622461 75 ntBASIC0.16□□□□□ -2.38
SMCHD1A6NHR9 RNU6-681P-201ENST00000364012 104 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 RNU6-46P-201ENST00000383860 107 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 Y_RNA.495-201ENST00000384435 112 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 RNA5SP134-201ENST00000516492 96 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 AC140658.3-201ENST00000567603 271 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 MIR4796-201ENST00000580742 81 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 RNU6-640P-201ENST00000363693 105 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 RNU6-675P-201ENST00000384236 104 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 Y_RNA.660-201ENST00000516002 120 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 RNU7-129P-201ENST00000516128 62 ntBASIC0.14□□□□□ -2.39
SMCHD1A6NHR9 RNU6-168P-201ENST00000516189 101 ntBASIC0.13□□□□□ -2.39
SMCHD1A6NHR9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.13□□□□□ -2.39
SMCHD1A6NHR9 MIR5190-201ENST00000581537 80 ntBASIC0.13□□□□□ -2.39
SMCHD1A6NHR9 MIR4473-201ENST00000583731 91 ntBASIC0.13□□□□□ -2.39
SMCHD1A6NHR9 RNA5SP98-201ENST00000363158 137 ntBASIC0.13□□□□□ -2.39
SMCHD1A6NHR9 RNA5SP395-201ENST00000516567 118 ntBASIC0.13□□□□□ -2.39
SMCHD1A6NHR9 RNA5SP128-201ENST00000365305 116 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms