Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNU6-656P-201ENST00000516785 107 ntBASIC1.81□□□□□ -2.12
RCCD1A6NED2 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
RCCD1A6NED2 Y_RNA.250-201ENST00000364542 110 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 SNORA8.2-201ENST00000384372 139 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 MIR764-201ENST00000390811 85 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 RNA5SP299-201ENST00000391203 116 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 RNU1-92P-201ENST00000517017 135 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 AC018659.1-201ENST00000551083 169 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 AC015712.3-201ENST00000559380 164 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 MIR3678-201ENST00000578455 94 ntBASIC1.8□□□□□ -2.12
RCCD1A6NED2 SNORA26.9-201ENST00000391322 122 ntBASIC1.79□□□□□ -2.12
RCCD1A6NED2 RNU6-237P-201ENST00000515985 71 ntBASIC1.79□□□□□ -2.12
RCCD1A6NED2 SNORA40.17-201ENST00000517256 115 ntBASIC1.79□□□□□ -2.12
RCCD1A6NED2 MIR4769-201ENST00000584126 77 ntBASIC1.79□□□□□ -2.12
RCCD1A6NED2 RNA5SP432-201ENST00000362480 116 ntBASIC1.78□□□□□ -2.12
RCCD1A6NED2 RNA5SP192-201ENST00000364404 120 ntBASIC1.78□□□□□ -2.12
RCCD1A6NED2 RNU6-1089P-201ENST00000516473 104 ntBASIC1.78□□□□□ -2.12
RCCD1A6NED2 SCARNA16.5-201ENST00000517114 183 ntBASIC1.78□□□□□ -2.12
RCCD1A6NED2 MIR466-201ENST00000580653 84 ntBASIC1.78□□□□□ -2.12
RCCD1A6NED2 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
RCCD1A6NED2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
RCCD1A6NED2 RNU6-1162P-201ENST00000384443 104 ntBASIC1.77□□□□□ -2.13
RCCD1A6NED2 MIR19B1-201ENST00000384829 87 ntBASIC1.77□□□□□ -2.13
RCCD1A6NED2 MIR573-201ENST00000384964 99 ntBASIC1.77□□□□□ -2.13
RCCD1A6NED2 RNU6-269P-201ENST00000391077 97 ntBASIC1.77□□□□□ -2.13
RCCD1A6NED2 MIR3612-201ENST00000579753 87 ntBASIC1.77□□□□□ -2.13
RCCD1A6NED2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RCCD1A6NED2 RNU6-302P-201ENST00000365249 107 ntBASIC1.76□□□□□ -2.13
RCCD1A6NED2 MIR200A-201ENST00000384875 90 ntBASIC1.76□□□□□ -2.13
RCCD1A6NED2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RCCD1A6NED2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.76□□□□□ -2.13
RCCD1A6NED2 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
RCCD1A6NED2 RNU6-482P-201ENST00000391068 107 ntBASIC1.75□□□□□ -2.13
RCCD1A6NED2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.75□□□□□ -2.13
RCCD1A6NED2 AC025627.3-201ENST00000582078 182 ntBASIC1.75□□□□□ -2.13
RCCD1A6NED2 AC084768.2-201ENST00000622736 221 ntBASIC1.75□□□□□ -2.13
RCCD1A6NED2 RNU6-829P-201ENST00000363700 112 ntBASIC1.74□□□□□ -2.13
RCCD1A6NED2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.74□□□□□ -2.13
RCCD1A6NED2 RNU6-1079P-201ENST00000362861 110 ntBASIC1.73□□□□□ -2.13
RCCD1A6NED2 AL353997.5-201ENST00000618886 171 ntBASIC1.73□□□□□ -2.13
RCCD1A6NED2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RCCD1A6NED2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RCCD1A6NED2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RCCD1A6NED2 MIR521-2-201ENST00000384818 87 ntBASIC1.72□□□□□ -2.13
RCCD1A6NED2 RNA5SP484-201ENST00000458857 111 ntBASIC1.72□□□□□ -2.13
RCCD1A6NED2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RCCD1A6NED2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RCCD1A6NED2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RCCD1A6NED2 MIR320A-201ENST00000385302 82 ntBASIC1.71□□□□□ -2.14
RCCD1A6NED2 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
RCCD1A6NED2 SNORD124-201ENST00000459577 104 ntBASIC1.7□□□□□ -2.14
RCCD1A6NED2 RNU6-92P-201ENST00000605893 104 ntBASIC1.7□□□□□ -2.14
RCCD1A6NED2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.7□□□□□ -2.14
RCCD1A6NED2 AL162376.1-201ENST00000624117 175 ntBASIC1.7□□□□□ -2.14
RCCD1A6NED2 MIR6828-201ENST00000636181 60 ntBASIC1.7□□□□□ -2.14
RCCD1A6NED2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
RCCD1A6NED2 Y_RNA.236-201ENST00000364427 111 ntBASIC1.69□□□□□ -2.14
RCCD1A6NED2 AL157398.1-201ENST00000452981 186 ntBASIC1.68□□□□□ -2.14
RCCD1A6NED2 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
RCCD1A6NED2 MIR548V-201ENST00000584165 80 ntBASIC1.68□□□□□ -2.14
RCCD1A6NED2 MIR548C-201ENST00000384815 97 ntBASIC1.67□□□□□ -2.14
RCCD1A6NED2 RNU6-122P-201ENST00000516818 107 ntBASIC1.67□□□□□ -2.14
RCCD1A6NED2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.66□□□□□ -2.14
RCCD1A6NED2 SNORA15B-2-201ENST00000384058 135 ntBASIC1.66□□□□□ -2.14
RCCD1A6NED2 SNORA15B-1-201ENST00000384334 135 ntBASIC1.66□□□□□ -2.14
RCCD1A6NED2 AC021146.9-201ENST00000512503 156 ntBASIC1.66□□□□□ -2.14
RCCD1A6NED2 RNA5SP227-201ENST00000516184 113 ntBASIC1.66□□□□□ -2.14
RCCD1A6NED2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.66□□□□□ -2.14
RCCD1A6NED2 MIR4255-201ENST00000579351 72 ntBASIC1.66□□□□□ -2.14
RCCD1A6NED2 RNU1-17P-201ENST00000363022 152 ntBASIC1.65□□□□□ -2.15
RCCD1A6NED2 MIR758-201ENST00000390227 88 ntBASIC1.65□□□□□ -2.15
RCCD1A6NED2 MIR1323-201ENST00000408090 73 ntBASIC1.65□□□□□ -2.15
RCCD1A6NED2 snoU13.13-201ENST00000458842 104 ntBASIC1.65□□□□□ -2.15
RCCD1A6NED2 SNORD114-24-201ENST00000365029 72 ntBASIC1.64□□□□□ -2.15
RCCD1A6NED2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.64□□□□□ -2.15
RCCD1A6NED2 MIR3938-201ENST00000582157 103 ntBASIC1.64□□□□□ -2.15
RCCD1A6NED2 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
RCCD1A6NED2 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
RCCD1A6NED2 RNU4-45P-201ENST00000365469 141 ntBASIC1.63□□□□□ -2.15
RCCD1A6NED2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RCCD1A6NED2 RNA5SP458-201ENST00000516188 119 ntBASIC1.63□□□□□ -2.15
RCCD1A6NED2 SCARNA17.3-201ENST00000516381 125 ntBASIC1.63□□□□□ -2.15
RCCD1A6NED2 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
RCCD1A6NED2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.63□□□□□ -2.15
RCCD1A6NED2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.63□□□□□ -2.15
RCCD1A6NED2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.62□□□□□ -2.15
RCCD1A6NED2 SNORD26-201ENST00000384147 75 ntBASIC1.62□□□□□ -2.15
RCCD1A6NED2 uc_338.10-201ENST00000621872 182 ntBASIC1.62□□□□□ -2.15
RCCD1A6NED2 MIR18A-201ENST00000362310 71 ntBASIC1.61□□□□□ -2.15
RCCD1A6NED2 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
RCCD1A6NED2 Y_RNA.633-201ENST00000459107 95 ntBASIC1.61□□□□□ -2.15
RCCD1A6NED2 RNA5SP255-201ENST00000516370 107 ntBASIC1.61□□□□□ -2.15
RCCD1A6NED2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RCCD1A6NED2 MIR630-201ENST00000384957 97 ntBASIC1.6□□□□□ -2.15
RCCD1A6NED2 MIR517B-201ENST00000385102 67 ntBASIC1.6□□□□□ -2.15
RCCD1A6NED2 AC006210.1-201ENST00000424882 111 ntBASIC1.6□□□□□ -2.15
RCCD1A6NED2 SNORD13-201ENST00000459299 104 ntBASIC1.6□□□□□ -2.15
RCCD1A6NED2 AC011195.1-201ENST00000578177 177 ntBASIC1.6□□□□□ -2.15
RCCD1A6NED2 SNORD60.1-201ENST00000362451 73 ntBASIC1.59□□□□□ -2.15
RCCD1A6NED2 SNORA63.6-201ENST00000364921 119 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms