Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 RNU6-955P-201ENST00000410497 104 ntBASIC1.28□□□□□ -2.2
ZC3H12DA2A288 SNORA40.17-201ENST00000517256 115 ntBASIC1.28□□□□□ -2.2
ZC3H12DA2A288 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.28□□□□□ -2.2
ZC3H12DA2A288 AC092634.7-201ENST00000621022 103 ntBASIC1.28□□□□□ -2.2
ZC3H12DA2A288 MTND4LP1-201ENST00000446263 157 ntBASIC1.27□□□□□ -2.21
ZC3H12DA2A288 AC073869.9-201ENST00000641610 120 ntBASIC1.27□□□□□ -2.21
ZC3H12DA2A288 RNU6-1079P-201ENST00000362861 110 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 RNU6-829P-201ENST00000363700 112 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 RNU6-614P-201ENST00000384369 107 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 RNU6-141P-201ENST00000410499 105 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 FABP5P4-201ENST00000437203 171 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 U7.7-201ENST00000459276 60 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 U6.59-201ENST00000615686 107 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 AC067863.3-201ENST00000624172 122 ntBASIC1.26□□□□□ -2.21
ZC3H12DA2A288 RNA5SP192-201ENST00000364404 120 ntBASIC1.25□□□□□ -2.21
ZC3H12DA2A288 Y_RNA.375-201ENST00000365625 101 ntBASIC1.25□□□□□ -2.21
ZC3H12DA2A288 RNU4-62P-201ENST00000410125 130 ntBASIC1.25□□□□□ -2.21
ZC3H12DA2A288 AC002350.1-201ENST00000490759 375 ntBASIC1.25□□□□□ -2.21
ZC3H12DA2A288 SNORD89-201ENST00000390981 114 ntBASIC1.24□□□□□ -2.21
ZC3H12DA2A288 RNU6-482P-201ENST00000391068 107 ntBASIC1.24□□□□□ -2.21
ZC3H12DA2A288 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
ZC3H12DA2A288 AC244669.1-204ENST00000621564 178 ntBASIC1.24□□□□□ -2.21
ZC3H12DA2A288 RNU6-260P-201ENST00000384092 107 ntBASIC1.23□□□□□ -2.21
ZC3H12DA2A288 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
ZC3H12DA2A288 SNORD105-201ENST00000386910 85 ntBASIC1.23□□□□□ -2.21
ZC3H12DA2A288 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
ZC3H12DA2A288 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
ZC3H12DA2A288 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
ZC3H12DA2A288 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
ZC3H12DA2A288 SNORA7.1-201ENST00000363750 139 ntBASIC1.22□□□□□ -2.21
ZC3H12DA2A288 SNORA25.5-201ENST00000363782 126 ntBASIC1.22□□□□□ -2.21
ZC3H12DA2A288 MIR216B-201ENST00000390186 82 ntBASIC1.22□□□□□ -2.21
ZC3H12DA2A288 RNA5SP299-201ENST00000391203 116 ntBASIC1.22□□□□□ -2.21
ZC3H12DA2A288 RNU6-542P-201ENST00000516405 103 ntBASIC1.22□□□□□ -2.21
ZC3H12DA2A288 Y_RNA.236-201ENST00000364427 111 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 RNA5SP117-201ENST00000365294 118 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 RNU6-716P-201ENST00000365621 103 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 SNORD124-201ENST00000459577 104 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 RNU6-237P-201ENST00000515985 71 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 SCARNA21.1-201ENST00000515996 128 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 RNA5SP458-201ENST00000516188 119 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 RNU6-656P-201ENST00000516785 107 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 MIR466-201ENST00000580653 84 ntBASIC1.21□□□□□ -2.22
ZC3H12DA2A288 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.21□□□□□ -2.22
ZC3H12DA2A288 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
ZC3H12DA2A288 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ZC3H12DA2A288 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
ZC3H12DA2A288 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
ZC3H12DA2A288 SNORD28-201ENST00000384706 75 ntBASIC1.2□□□□□ -2.22
ZC3H12DA2A288 MIR548L-201ENST00000408303 86 ntBASIC1.2□□□□□ -2.22
ZC3H12DA2A288 snoU13.13-201ENST00000458842 104 ntBASIC1.2□□□□□ -2.22
ZC3H12DA2A288 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
ZC3H12DA2A288 MIR548V-201ENST00000584165 80 ntBASIC1.2□□□□□ -2.22
ZC3H12DA2A288 SNORA2.1-201ENST00000363089 137 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 MT-TY-201ENST00000387409 66 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 SNORA75.1-201ENST00000391130 148 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 RNU5B-6P-201ENST00000516765 68 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 RNU6-135P-201ENST00000516769 101 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 MIR4460-201ENST00000577862 86 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
ZC3H12DA2A288 RNU6-446P-201ENST00000362827 106 ntBASIC1.18□□□□□ -2.22
ZC3H12DA2A288 MIR7-2-201ENST00000384970 110 ntBASIC1.18□□□□□ -2.22
ZC3H12DA2A288 SNORD41.1-201ENST00000391000 69 ntBASIC1.18□□□□□ -2.22
ZC3H12DA2A288 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
ZC3H12DA2A288 MIR4639-201ENST00000584938 69 ntBASIC1.18□□□□□ -2.22
ZC3H12DA2A288 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
ZC3H12DA2A288 RNU6-726P-201ENST00000364680 107 ntBASIC1.17□□□□□ -2.22
ZC3H12DA2A288 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.17□□□□□ -2.22
ZC3H12DA2A288 SNORD114-24-201ENST00000365029 72 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 RNU6-269P-201ENST00000391077 97 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 AL157398.1-201ENST00000452981 186 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 RNU6-469P-201ENST00000516253 101 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 RNU6-1089P-201ENST00000516473 104 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 AC018659.1-201ENST00000551083 169 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
ZC3H12DA2A288 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ZC3H12DA2A288 RNU1-141P-201ENST00000364623 158 ntBASIC1.15□□□□□ -2.23
ZC3H12DA2A288 MIR548C-201ENST00000384815 97 ntBASIC1.15□□□□□ -2.23
ZC3H12DA2A288 AP1B1P2-201ENST00000416196 106 ntBASIC1.15□□□□□ -2.23
ZC3H12DA2A288 RNA5SP484-201ENST00000458857 111 ntBASIC1.15□□□□□ -2.23
ZC3H12DA2A288 RNA5SP47-201ENST00000517230 109 ntBASIC1.15□□□□□ -2.23
ZC3H12DA2A288 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
ZC3H12DA2A288 MIR6739-201ENST00000622461 75 ntBASIC1.15□□□□□ -2.23
ZC3H12DA2A288 MIR378A-201ENST00000362177 66 ntBASIC1.14□□□□□ -2.23
ZC3H12DA2A288 MIR26B-201ENST00000362251 77 ntBASIC1.14□□□□□ -2.23
ZC3H12DA2A288 RNU6-940P-201ENST00000363433 104 ntBASIC1.14□□□□□ -2.23
ZC3H12DA2A288 RNU7-74P-201ENST00000459104 62 ntBASIC1.14□□□□□ -2.23
ZC3H12DA2A288 RNA5SP255-201ENST00000516370 107 ntBASIC1.14□□□□□ -2.23
ZC3H12DA2A288 MIR7978-201ENST00000636158 59 ntBASIC1.14□□□□□ -2.23
ZC3H12DA2A288 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.13□□□□□ -2.23
ZC3H12DA2A288 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ZC3H12DA2A288 SNORD113-4-201ENST00000364802 75 ntBASIC1.13□□□□□ -2.23
ZC3H12DA2A288 MIR630-201ENST00000384957 97 ntBASIC1.13□□□□□ -2.23
ZC3H12DA2A288 MIR3678-201ENST00000578455 94 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms