Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.8□□□□□ -2.7
TCRBV4S1A1TA0A5B7 MIR4770-201ENST00000579149 58 ntBASIC-1.8□□□□□ -2.7
TCRBV4S1A1TA0A5B7 AL442128.1-201ENST00000615151 90 ntBASIC-1.8□□□□□ -2.7
TCRBV4S1A1TA0A5B7 MIR6844-201ENST00000637122 62 ntBASIC-1.8□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.81□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.81□□□□□ -2.7
TCRBV4S1A1TA0A5B7 SNORD50.2-201ENST00000365465 70 ntBASIC-1.81□□□□□ -2.7
TCRBV4S1A1TA0A5B7 SNORD42.2-201ENST00000365570 69 ntBASIC-1.81□□□□□ -2.7
TCRBV4S1A1TA0A5B7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.81□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.82□□□□□ -2.7
TCRBV4S1A1TA0A5B7 SNORA33.1-201ENST00000364957 130 ntBASIC-1.82□□□□□ -2.7
TCRBV4S1A1TA0A5B7 AC022028.1-201ENST00000412054 408 ntBASIC-1.82□□□□□ -2.7
TCRBV4S1A1TA0A5B7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.82□□□□□ -2.7
TCRBV4S1A1TA0A5B7 AC091912.2-201ENST00000624798 167 ntBASIC-1.82□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 RNU6-409P-201ENST00000384114 104 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 MIR548D2-201ENST00000384955 97 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 MT-TW-201ENST00000387382 68 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 snoU13.17-201ENST00000458802 104 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 AC107027.2-201ENST00000512197 115 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 MIR3646-201ENST00000578301 84 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.83□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.84□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.84□□□□□ -2.7
TCRBV4S1A1TA0A5B7 RNY4P28-201ENST00000365281 93 ntBASIC-1.84□□□□□ -2.7
TCRBV4S1A1TA0A5B7 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.84□□□□□ -2.7
TCRBV4S1A1TA0A5B7 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.84□□□□□ -2.7
TCRBV4S1A1TA0A5B7 AL353691.2-201ENST00000443795 59 ntBASIC-1.84□□□□□ -2.7
TCRBV4S1A1TA0A5B7 MIR6502-201ENST00000617296 76 ntBASIC-1.84□□□□□ -2.7
TCRBV4S1A1TA0A5B7 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.85□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.85□□□□□ -2.71
TCRBV4S1A1TA0A5B7 MIR3064-201ENST00000581130 66 ntBASIC-1.85□□□□□ -2.71
TCRBV4S1A1TA0A5B7 MIR6874-201ENST00000635894 71 ntBASIC-1.85□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-164P-201ENST00000364604 103 ntBASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 MIR507-201ENST00000385234 94 ntBASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNA5SP147-201ENST00000516493 109 ntBASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 CYP3A54P-201ENST00000566950 75 ntBASIC-1.86□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.87□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.87□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-260P-201ENST00000384092 107 ntBASIC-1.87□□□□□ -2.71
TCRBV4S1A1TA0A5B7 MIR548U-201ENST00000390728 81 ntBASIC-1.87□□□□□ -2.71
TCRBV4S1A1TA0A5B7 SNORD127-201ENST00000458892 86 ntBASIC-1.87□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-988P-201ENST00000519081 107 ntBASIC-1.87□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.88□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-382P-201ENST00000365181 106 ntBASIC-1.88□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.88□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.88□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.88□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.88□□□□□ -2.71
TCRBV4S1A1TA0A5B7 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.88□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-80P-201ENST00000384195 107 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 AL513043.2-201ENST00000573941 143 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 MIR4680-201ENST00000580906 66 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 AC104996.3-201ENST00000590718 94 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 MIR3658-201ENST00000636291 56 ntBASIC-1.89□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.9□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.9□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.9□□□□□ -2.71
TCRBV4S1A1TA0A5B7 MIR548P-201ENST00000408336 84 ntBASIC-1.9□□□□□ -2.71
TCRBV4S1A1TA0A5B7 RNU7-154P-201ENST00000516194 62 ntBASIC-1.9□□□□□ -2.71
TCRBV4S1A1TA0A5B7 AC006254.2-201ENST00000603259 279 ntBASIC-1.9□□□□□ -2.71
TCRBV4S1A1TA0A5B7 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.91□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-474P-201ENST00000384243 107 ntBASIC-1.91□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-875P-201ENST00000516488 106 ntBASIC-1.91□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.91□□□□□ -2.72
TCRBV4S1A1TA0A5B7 SNORA2.1-201ENST00000363089 137 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 MIR203A-201ENST00000384836 110 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 SNORD90-201ENST00000391145 111 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 AL078595.1-201ENST00000404458 226 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-732P-201ENST00000516033 103 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-412P-201ENST00000516434 106 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 MIR3121-201ENST00000579680 77 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 MIR4795-201ENST00000584182 89 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 U6atac.1-201ENST00000616025 117 ntBASIC-1.92□□□□□ -2.72
TCRBV4S1A1TA0A5B7 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-713P-201ENST00000384761 107 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-816P-201ENST00000390914 107 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 SNORD37.2-201ENST00000391075 66 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 MIR1302-6-201ENST00000408466 90 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 RNA5SP136-201ENST00000410906 107 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 AP002795.1-201ENST00000534879 84 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 MIR3657-201ENST00000584818 117 ntBASIC-1.93□□□□□ -2.72
TCRBV4S1A1TA0A5B7 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms