Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.85□□□□□ -2.55
TRAV39A0A0B4J263 RNU6-394P-201ENST00000410735 107 ntBASIC-0.85□□□□□ -2.55
TRAV39A0A0B4J263 RNU7-55P-201ENST00000459426 62 ntBASIC-0.85□□□□□ -2.55
TRAV39A0A0B4J263 FGF7P7-201ENST00000514120 227 ntBASIC-0.85□□□□□ -2.55
TRAV39A0A0B4J263 RNU6-65P-201ENST00000516332 98 ntBASIC-0.85□□□□□ -2.55
TRAV39A0A0B4J263 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 MIR548E-201ENST00000408287 88 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 AC021146.6-201ENST00000514659 117 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 RNA5SP67-201ENST00000516422 131 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 SNORA40.17-201ENST00000517256 115 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 MIR4536-1-201ENST00000583537 88 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 AL391099.1-201ENST00000624635 187 ntBASIC-0.86□□□□□ -2.55
TRAV39A0A0B4J263 SNORD114-4-201ENST00000363962 75 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 SNORD58C-201ENST00000365223 64 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 MIR569-201ENST00000385228 96 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 SNORD2-201ENST00000459163 69 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 RNU6-75P-201ENST00000515944 104 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 MIR6851-201ENST00000617060 67 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.87□□□□□ -2.55
TRAV39A0A0B4J263 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.88□□□□□ -2.55
TRAV39A0A0B4J263 MIR577-201ENST00000385196 96 ntBASIC-0.88□□□□□ -2.55
TRAV39A0A0B4J263 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.88□□□□□ -2.55
TRAV39A0A0B4J263 MIR3144-201ENST00000579460 79 ntBASIC-0.88□□□□□ -2.55
TRAV39A0A0B4J263 U3.27-201ENST00000391237 200 ntBASIC-0.89□□□□□ -2.55
TRAV39A0A0B4J263 SNORD42B-201ENST00000458893 67 ntBASIC-0.89□□□□□ -2.55
TRAV39A0A0B4J263 RNA5SP476-201ENST00000516613 103 ntBASIC-0.89□□□□□ -2.55
TRAV39A0A0B4J263 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.9□□□□□ -2.55
TRAV39A0A0B4J263 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.9□□□□□ -2.55
TRAV39A0A0B4J263 MIR5704-201ENST00000584029 77 ntBASIC-0.9□□□□□ -2.55
TRAV39A0A0B4J263 RNU6-476P-201ENST00000384726 107 ntBASIC-0.91□□□□□ -2.56
TRAV39A0A0B4J263 HAR1A.1-201ENST00000459583 118 ntBASIC-0.91□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.91□□□□□ -2.56
TRAV39A0A0B4J263 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.91□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.92□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-973P-201ENST00000364690 107 ntBASIC-0.92□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.92□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.92□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-426P-201ENST00000516464 97 ntBASIC-0.92□□□□□ -2.56
TRAV39A0A0B4J263 AL513043.2-201ENST00000573941 143 ntBASIC-0.92□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-502P-201ENST00000362419 108 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-832P-201ENST00000363319 107 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 SNORD50.2-201ENST00000365465 70 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 RNU7-85P-201ENST00000458851 63 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 MIR4694-201ENST00000578534 80 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 MIR548AX-201ENST00000580117 73 ntBASIC-0.93□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.94□□□□□ -2.56
TRAV39A0A0B4J263 MIR518B-201ENST00000385127 83 ntBASIC-0.94□□□□□ -2.56
TRAV39A0A0B4J263 MTND5P41-201ENST00000517498 206 ntBASIC-0.94□□□□□ -2.56
TRAV39A0A0B4J263 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.94□□□□□ -2.56
TRAV39A0A0B4J263 AL035470.1-201ENST00000622571 220 ntBASIC-0.94□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-132P-201ENST00000383863 107 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 SNORD57-201ENST00000448188 72 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 MIR3179-1-201ENST00000578940 84 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 MIR3179-2-201ENST00000579107 84 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 MIR3179-3-201ENST00000579566 84 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 MIR3179-4-201ENST00000617599 84 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 snoR1.1-201ENST00000628177 80 ntBASIC-0.95□□□□□ -2.56
TRAV39A0A0B4J263 SNORA13-201ENST00000458790 133 ntBASIC-0.96□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-772P-201ENST00000516042 105 ntBASIC-0.96□□□□□ -2.56
TRAV39A0A0B4J263 SNORD22.1-201ENST00000516331 125 ntBASIC-0.96□□□□□ -2.56
TRAV39A0A0B4J263 MIR3140-201ENST00000583685 90 ntBASIC-0.96□□□□□ -2.56
TRAV39A0A0B4J263 MIR6854-201ENST00000614935 69 ntBASIC-0.96□□□□□ -2.56
TRAV39A0A0B4J263 RNY3P2-201ENST00000362918 102 ntBASIC-0.97□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-721P-201ENST00000410155 105 ntBASIC-0.97□□□□□ -2.56
TRAV39A0A0B4J263 RNU6-881P-201ENST00000516813 102 ntBASIC-0.97□□□□□ -2.56
TRAV39A0A0B4J263 MIR3613-201ENST00000579844 87 ntBASIC-0.97□□□□□ -2.56
TRAV39A0A0B4J263 MIR8068-201ENST00000618032 68 ntBASIC-0.97□□□□□ -2.56
TRAV39A0A0B4J263 AL157777.2-201ENST00000258070 137 ntBASIC-0.98□□□□□ -2.57
TRAV39A0A0B4J263 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.98□□□□□ -2.57
TRAV39A0A0B4J263 MIR548U-201ENST00000390728 81 ntBASIC-0.98□□□□□ -2.57
TRAV39A0A0B4J263 MTND4LP9-201ENST00000427694 174 ntBASIC-0.98□□□□□ -2.57
TRAV39A0A0B4J263 RNU6-182P-201ENST00000516970 105 ntBASIC-0.98□□□□□ -2.57
TRAV39A0A0B4J263 MIR6773-201ENST00000612812 74 ntBASIC-0.98□□□□□ -2.57
TRAV39A0A0B4J263 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.99□□□□□ -2.57
TRAV39A0A0B4J263 MT-TG-201ENST00000387429 68 ntBASIC-0.99□□□□□ -2.57
TRAV39A0A0B4J263 AC068339.1-201ENST00000526965 141 ntBASIC-0.99□□□□□ -2.57
TRAV39A0A0B4J263 AC103810.7-201ENST00000607821 91 ntBASIC-0.99□□□□□ -2.57
TRAV39A0A0B4J263 SNORA63.2-201ENST00000362603 126 ntBASIC-1□□□□□ -2.57
TRAV39A0A0B4J263 SNORA63.6-201ENST00000364921 119 ntBASIC-1□□□□□ -2.57
TRAV39A0A0B4J263 MIR3064-201ENST00000581130 66 ntBASIC-1□□□□□ -2.57
TRAV39A0A0B4J263 AL353621.2-201ENST00000605340 133 ntBASIC-1□□□□□ -2.57
TRAV39A0A0B4J263 SNORD45B-201ENST00000364617 72 ntBASIC-1.01□□□□□ -2.57
TRAV39A0A0B4J263 MIR517B-201ENST00000385102 67 ntBASIC-1.01□□□□□ -2.57
TRAV39A0A0B4J263 AP000533.3-201ENST00000447704 118 ntBASIC-1.01□□□□□ -2.57
TRAV39A0A0B4J263 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.01□□□□□ -2.57
TRAV39A0A0B4J263 AC022137.1-201ENST00000483735 151 ntBASIC-1.01□□□□□ -2.57
TRAV39A0A0B4J263 MIR4679-2-201ENST00000578358 77 ntBASIC-1.01□□□□□ -2.57
TRAV39A0A0B4J263 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.02□□□□□ -2.57
TRAV39A0A0B4J263 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms