Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 Y_RNA.495-201ENST00000384435 112 ntBASIC0.66□□□□□ -2.3
GTF3C3Q9Y5Q9 MIR2113-201ENST00000459007 91 ntBASIC0.66□□□□□ -2.3
GTF3C3Q9Y5Q9 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
GTF3C3Q9Y5Q9 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR4696-201ENST00000581431 70 ntBASIC0.65□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR6504-201ENST00000613520 61 ntBASIC0.65□□□□□ -2.31
GTF3C3Q9Y5Q9 U7.3-201ENST00000616123 62 ntBASIC0.65□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR548U-201ENST00000390728 81 ntBASIC0.64□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR103A1-201ENST00000362165 78 ntBASIC0.63□□□□□ -2.31
GTF3C3Q9Y5Q9 Y_RNA.81-201ENST00000362997 102 ntBASIC0.62□□□□□ -2.31
GTF3C3Q9Y5Q9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.62□□□□□ -2.31
GTF3C3Q9Y5Q9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.62□□□□□ -2.31
GTF3C3Q9Y5Q9 SNORD4B-201ENST00000459083 72 ntBASIC0.62□□□□□ -2.31
GTF3C3Q9Y5Q9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
GTF3C3Q9Y5Q9 RNA5SP62-201ENST00000363457 110 ntBASIC0.61□□□□□ -2.31
GTF3C3Q9Y5Q9 SNORA25.9-201ENST00000365087 128 ntBASIC0.61□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR519E-201ENST00000385075 84 ntBASIC0.61□□□□□ -2.31
GTF3C3Q9Y5Q9 RNU6-75P-201ENST00000515944 104 ntBASIC0.61□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR4452-201ENST00000583004 71 ntBASIC0.61□□□□□ -2.31
GTF3C3Q9Y5Q9 SNORA9.1-201ENST00000362412 131 ntBASIC0.6□□□□□ -2.31
GTF3C3Q9Y5Q9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
GTF3C3Q9Y5Q9 RNU7-85P-201ENST00000458851 63 ntBASIC0.6□□□□□ -2.31
GTF3C3Q9Y5Q9 RNA5SP134-201ENST00000516492 96 ntBASIC0.6□□□□□ -2.31
GTF3C3Q9Y5Q9 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 RNU1-141P-201ENST00000364623 158 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 SNORD110-201ENST00000408189 75 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 RNU6-935P-201ENST00000410371 100 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 AC006210.1-201ENST00000424882 111 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 AC073261.1-201ENST00000429409 121 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR4752-201ENST00000579672 72 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 MIR548AG2-201ENST00000581228 64 ntBASIC0.59□□□□□ -2.31
GTF3C3Q9Y5Q9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.58□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR6755-201ENST00000619993 66 ntBASIC0.58□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR518E-201ENST00000385252 88 ntBASIC0.57□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR760-201ENST00000390220 80 ntBASIC0.57□□□□□ -2.32
GTF3C3Q9Y5Q9 RNU6-162P-201ENST00000516228 103 ntBASIC0.57□□□□□ -2.32
GTF3C3Q9Y5Q9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.57□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
GTF3C3Q9Y5Q9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
GTF3C3Q9Y5Q9 SNORA50A-201ENST00000384225 134 ntBASIC0.56□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR499A-201ENST00000384903 122 ntBASIC0.56□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR548J-201ENST00000408833 112 ntBASIC0.56□□□□□ -2.32
GTF3C3Q9Y5Q9 Y_RNA.676-201ENST00000516393 96 ntBASIC0.56□□□□□ -2.32
GTF3C3Q9Y5Q9 U3.27-201ENST00000391237 200 ntBASIC0.55□□□□□ -2.32
GTF3C3Q9Y5Q9 RNA5SP484-201ENST00000458857 111 ntBASIC0.55□□□□□ -2.32
GTF3C3Q9Y5Q9 NAMPTP3-201ENST00000569273 224 ntBASIC0.55□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR6788-201ENST00000618842 66 ntBASIC0.55□□□□□ -2.32
GTF3C3Q9Y5Q9 RNA5SP128-201ENST00000365305 116 ntBASIC0.54□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR4460-201ENST00000577862 86 ntBASIC0.54□□□□□ -2.32
GTF3C3Q9Y5Q9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.53□□□□□ -2.32
GTF3C3Q9Y5Q9 AC069113.3-201ENST00000521019 150 ntBASIC0.53□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR4315-1-201ENST00000636800 73 ntBASIC0.53□□□□□ -2.32
GTF3C3Q9Y5Q9 MIR4315-2-201ENST00000640925 73 ntBASIC0.53□□□□□ -2.32
GTF3C3Q9Y5Q9 RNU6-153P-201ENST00000364422 104 ntBASIC0.52□□□□□ -2.33
GTF3C3Q9Y5Q9 RNU6-811P-201ENST00000384069 107 ntBASIC0.52□□□□□ -2.33
GTF3C3Q9Y5Q9 AC108740.1-201ENST00000498629 225 ntBASIC0.52□□□□□ -2.33
GTF3C3Q9Y5Q9 MIR151B-201ENST00000584249 96 ntBASIC0.52□□□□□ -2.33
GTF3C3Q9Y5Q9 AC069503.3-201ENST00000618674 145 ntBASIC0.52□□□□□ -2.33
GTF3C3Q9Y5Q9 Y_RNA.609-201ENST00000410669 89 ntBASIC0.51□□□□□ -2.33
GTF3C3Q9Y5Q9 AC093423.1-201ENST00000440817 142 ntBASIC0.51□□□□□ -2.33
GTF3C3Q9Y5Q9 RNU6-168P-201ENST00000516189 101 ntBASIC0.51□□□□□ -2.33
GTF3C3Q9Y5Q9 SNORA70.25-201ENST00000612741 95 ntBASIC0.51□□□□□ -2.33
GTF3C3Q9Y5Q9 Y_RNA.190-201ENST00000363964 101 ntBASIC0.5□□□□□ -2.33
GTF3C3Q9Y5Q9 MIRLET7F1-201ENST00000362202 87 ntBASIC0.49□□□□□ -2.33
GTF3C3Q9Y5Q9 Y_RNA.224-201ENST00000364308 111 ntBASIC0.49□□□□□ -2.33
GTF3C3Q9Y5Q9 Y_RNA.290-201ENST00000364879 114 ntBASIC0.49□□□□□ -2.33
GTF3C3Q9Y5Q9 RNU6-815P-201ENST00000384080 113 ntBASIC0.49□□□□□ -2.33
GTF3C3Q9Y5Q9 RNU1-29P-201ENST00000606574 126 ntBASIC0.49□□□□□ -2.33
GTF3C3Q9Y5Q9 AC026421.1-201ENST00000519101 163 ntBASIC0.48□□□□□ -2.33
GTF3C3Q9Y5Q9 MIR5000-201ENST00000577717 103 ntBASIC0.48□□□□□ -2.33
GTF3C3Q9Y5Q9 AC104996.3-201ENST00000590718 94 ntBASIC0.48□□□□□ -2.33
GTF3C3Q9Y5Q9 AL078603.1-201ENST00000603824 313 ntBASIC0.48□□□□□ -2.33
GTF3C3Q9Y5Q9 RNU6-652P-201ENST00000365488 107 ntBASIC0.47□□□□□ -2.33
GTF3C3Q9Y5Q9 RNU7-129P-201ENST00000516128 62 ntBASIC0.47□□□□□ -2.33
GTF3C3Q9Y5Q9 MALAT1.1-201ENST00000618249 95 ntBASIC0.47□□□□□ -2.33
GTF3C3Q9Y5Q9 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.47□□□□□ -2.33
GTF3C3Q9Y5Q9 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
GTF3C3Q9Y5Q9 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
GTF3C3Q9Y5Q9 Y_RNA.220-201ENST00000364244 109 ntBASIC0.46□□□□□ -2.34
GTF3C3Q9Y5Q9 RNY4P3-201ENST00000365254 95 ntBASIC0.46□□□□□ -2.34
GTF3C3Q9Y5Q9 MIR3064-201ENST00000581130 66 ntBASIC0.46□□□□□ -2.34
GTF3C3Q9Y5Q9 Y_RNA.491-201ENST00000384417 107 ntBASIC0.45□□□□□ -2.34
GTF3C3Q9Y5Q9 MIR451A-201ENST00000385059 72 ntBASIC0.45□□□□□ -2.34
GTF3C3Q9Y5Q9 MT-TY-201ENST00000387409 66 ntBASIC0.45□□□□□ -2.34
GTF3C3Q9Y5Q9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
GTF3C3Q9Y5Q9 MIR1287-201ENST00000408492 90 ntBASIC0.45□□□□□ -2.34
GTF3C3Q9Y5Q9 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
GTF3C3Q9Y5Q9 RNA5SP220-201ENST00000516298 104 ntBASIC0.45□□□□□ -2.34
GTF3C3Q9Y5Q9 Y_RNA.226-201ENST00000364337 114 ntBASIC0.44□□□□□ -2.34
GTF3C3Q9Y5Q9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.44□□□□□ -2.34
GTF3C3Q9Y5Q9 RNU6-905P-201ENST00000384434 107 ntBASIC0.43□□□□□ -2.34
GTF3C3Q9Y5Q9 MIR1236-201ENST00000408340 102 ntBASIC0.43□□□□□ -2.34
GTF3C3Q9Y5Q9 RNA5SP89-201ENST00000410300 108 ntBASIC0.43□□□□□ -2.34
GTF3C3Q9Y5Q9 RNU4-32P-201ENST00000363404 141 ntBASIC0.42□□□□□ -2.34
GTF3C3Q9Y5Q9 RNU6-132P-201ENST00000383863 107 ntBASIC0.42□□□□□ -2.34
GTF3C3Q9Y5Q9 RNA5SP247-201ENST00000411181 105 ntBASIC0.42□□□□□ -2.34
GTF3C3Q9Y5Q9 YWHAEP2-201ENST00000580066 112 ntBASIC0.42□□□□□ -2.34
GTF3C3Q9Y5Q9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
GTF3C3Q9Y5Q9 RNU6-42P-201ENST00000384165 107 ntBASIC0.41□□□□□ -2.34
GTF3C3Q9Y5Q9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms