Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
PCDHA3Q9Y5H8 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
PCDHA3Q9Y5H8 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
PCDHA3Q9Y5H8 RNU7-74P-201ENST00000459104 62 ntBASIC0.56□□□□□ -2.32
PCDHA3Q9Y5H8 U7.3-201ENST00000616123 62 ntBASIC0.56□□□□□ -2.32
PCDHA3Q9Y5H8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.56□□□□□ -2.32
PCDHA3Q9Y5H8 RNU2-59P-201ENST00000410482 191 ntBASIC0.55□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-863P-201ENST00000515989 104 ntBASIC0.55□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-168P-201ENST00000516189 101 ntBASIC0.55□□□□□ -2.32
PCDHA3Q9Y5H8 U6.100-201ENST00000636230 99 ntBASIC0.55□□□□□ -2.32
PCDHA3Q9Y5H8 RNU7-85P-201ENST00000458851 63 ntBASIC0.54□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-75P-201ENST00000515944 104 ntBASIC0.54□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-65P-201ENST00000516332 98 ntBASIC0.54□□□□□ -2.32
PCDHA3Q9Y5H8 Y_RNA.677-201ENST00000516401 85 ntBASIC0.54□□□□□ -2.32
PCDHA3Q9Y5H8 MIR4536-1-201ENST00000583537 88 ntBASIC0.54□□□□□ -2.32
PCDHA3Q9Y5H8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
PCDHA3Q9Y5H8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.54□□□□□ -2.32
PCDHA3Q9Y5H8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-905P-201ENST00000384434 107 ntBASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 SNORD4B-201ENST00000459083 72 ntBASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-848P-201ENST00000515948 107 ntBASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-617P-201ENST00000516147 107 ntBASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-473P-201ENST00000516164 107 ntBASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
PCDHA3Q9Y5H8 SNORD44.1-201ENST00000363202 61 ntBASIC0.52□□□□□ -2.33
PCDHA3Q9Y5H8 MIR617-201ENST00000385030 97 ntBASIC0.52□□□□□ -2.33
PCDHA3Q9Y5H8 RNA5SP89-201ENST00000410300 108 ntBASIC0.52□□□□□ -2.33
PCDHA3Q9Y5H8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-287P-201ENST00000516230 98 ntBASIC0.52□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-664P-201ENST00000362381 107 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-640P-201ENST00000363693 105 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 Y_RNA.290-201ENST00000364879 114 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 SNORD101-201ENST00000384027 73 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-269P-201ENST00000391077 97 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-519P-201ENST00000410590 108 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 AC069271.1-201ENST00000445577 156 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-162P-201ENST00000516228 103 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 MIR4696-201ENST00000581431 70 ntBASIC0.51□□□□□ -2.33
PCDHA3Q9Y5H8 MIRLET7D-201ENST00000362263 87 ntBASIC0.5□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-509P-201ENST00000363519 107 ntBASIC0.5□□□□□ -2.33
PCDHA3Q9Y5H8 Y_RNA.207-201ENST00000364142 106 ntBASIC0.5□□□□□ -2.33
PCDHA3Q9Y5H8 MIR216A-201ENST00000385063 110 ntBASIC0.5□□□□□ -2.33
PCDHA3Q9Y5H8 MIR936-201ENST00000401264 98 ntBASIC0.5□□□□□ -2.33
PCDHA3Q9Y5H8 MIR548AG2-201ENST00000581228 64 ntBASIC0.5□□□□□ -2.33
PCDHA3Q9Y5H8 AC073869.9-201ENST00000641610 120 ntBASIC0.5□□□□□ -2.33
PCDHA3Q9Y5H8 Y_RNA.190-201ENST00000363964 101 ntBASIC0.49□□□□□ -2.33
PCDHA3Q9Y5H8 MIR2113-201ENST00000459007 91 ntBASIC0.49□□□□□ -2.33
PCDHA3Q9Y5H8 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
PCDHA3Q9Y5H8 RNA5SP480-201ENST00000516840 109 ntBASIC0.49□□□□□ -2.33
PCDHA3Q9Y5H8 RN7SL793P-201ENST00000583259 296 ntBASIC0.49□□□□□ -2.33
PCDHA3Q9Y5H8 MALAT1.1-201ENST00000618249 95 ntBASIC0.49□□□□□ -2.33
PCDHA3Q9Y5H8 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
PCDHA3Q9Y5H8 AC090625.1-201ENST00000357130 210 ntBASIC0.48□□□□□ -2.33
PCDHA3Q9Y5H8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.48□□□□□ -2.33
PCDHA3Q9Y5H8 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.48□□□□□ -2.33
PCDHA3Q9Y5H8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.48□□□□□ -2.33
PCDHA3Q9Y5H8 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
PCDHA3Q9Y5H8 Y_RNA.239-201ENST00000364444 113 ntBASIC0.47□□□□□ -2.33
PCDHA3Q9Y5H8 RNY1P4-201ENST00000384595 115 ntBASIC0.47□□□□□ -2.33
PCDHA3Q9Y5H8 Y_RNA.540-201ENST00000384638 111 ntBASIC0.47□□□□□ -2.33
PCDHA3Q9Y5H8 MIR519E-201ENST00000385075 84 ntBASIC0.47□□□□□ -2.33
PCDHA3Q9Y5H8 MIR5706-201ENST00000579841 80 ntBASIC0.47□□□□□ -2.33
PCDHA3Q9Y5H8 AC026421.1-201ENST00000519101 163 ntBASIC0.46□□□□□ -2.34
PCDHA3Q9Y5H8 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
PCDHA3Q9Y5H8 SNORD114-26-201ENST00000363543 72 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 MIR548U-201ENST00000390728 81 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 RNU6-935P-201ENST00000410371 100 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 Y_RNA.609-201ENST00000410669 89 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 AC093423.1-201ENST00000440817 142 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 RNU1-29P-201ENST00000606574 126 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 MIR6755-201ENST00000619993 66 ntBASIC0.45□□□□□ -2.34
PCDHA3Q9Y5H8 SNORD114-23-201ENST00000363536 72 ntBASIC0.44□□□□□ -2.34
PCDHA3Q9Y5H8 MIR216B-201ENST00000390186 82 ntBASIC0.44□□□□□ -2.34
PCDHA3Q9Y5H8 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
PCDHA3Q9Y5H8 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 Y_RNA.220-201ENST00000364244 109 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 RNU1-141P-201ENST00000364623 158 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 MIR488-201ENST00000365739 83 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 SNORA2A-201ENST00000383885 135 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 Y_RNA.694-201ENST00000516677 117 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 RNU6-1057P-201ENST00000517162 102 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 MIR4752-201ENST00000579672 72 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 MIR3064-201ENST00000581130 66 ntBASIC0.43□□□□□ -2.34
PCDHA3Q9Y5H8 MIRLET7F1-201ENST00000362202 87 ntBASIC0.42□□□□□ -2.34
PCDHA3Q9Y5H8 RNU6-132P-201ENST00000383863 107 ntBASIC0.42□□□□□ -2.34
PCDHA3Q9Y5H8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
PCDHA3Q9Y5H8 RNU6-811P-201ENST00000384069 107 ntBASIC0.42□□□□□ -2.34
PCDHA3Q9Y5H8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.41□□□□□ -2.34
PCDHA3Q9Y5H8 RNA5SP484-201ENST00000458857 111 ntBASIC0.41□□□□□ -2.34
PCDHA3Q9Y5H8 AC104996.3-201ENST00000590718 94 ntBASIC0.41□□□□□ -2.34
PCDHA3Q9Y5H8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.4□□□□□ -2.35
PCDHA3Q9Y5H8 MIR7-2-201ENST00000384970 110 ntBASIC0.4□□□□□ -2.35
PCDHA3Q9Y5H8 U3.27-201ENST00000391237 200 ntBASIC0.4□□□□□ -2.35
PCDHA3Q9Y5H8 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
PCDHA3Q9Y5H8 SNORA70.25-201ENST00000612741 95 ntBASIC0.4□□□□□ -2.35
PCDHA3Q9Y5H8 MIR6779-201ENST00000617283 64 ntBASIC0.4□□□□□ -2.35
PCDHA3Q9Y5H8 AC010487.4-201ENST00000637027 61 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms