Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 RNU7-153P-201ENST00000516455 62 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 MIR3064-201ENST00000581130 66 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 AC104996.3-201ENST00000590718 94 ntBASIC1.26□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-315P-201ENST00000362666 107 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-535P-201ENST00000384722 107 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 MIR100-201ENST00000385259 80 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 RNU1-119P-201ENST00000391122 165 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-557P-201ENST00000516842 110 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 MIR1273G-201ENST00000577677 100 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 MIR4796-201ENST00000580742 81 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 AC008608.1-201ENST00000603910 127 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 AL136317.1-201ENST00000612653 226 ntBASIC1.25□□□□□ -2.21
PTPN22Q9Y2R2 Y_RNA.68-201ENST00000362881 102 ntBASIC1.24□□□□□ -2.21
PTPN22Q9Y2R2 Y_RNA.94-201ENST00000363068 106 ntBASIC1.24□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-132P-201ENST00000383863 107 ntBASIC1.24□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.24□□□□□ -2.21
PTPN22Q9Y2R2 MIR4712-201ENST00000583750 82 ntBASIC1.24□□□□□ -2.21
PTPN22Q9Y2R2 TRDV1-202ENST00000621643 102 ntBASIC1.24□□□□□ -2.21
PTPN22Q9Y2R2 MIR599-201ENST00000385069 95 ntBASIC1.23□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-129P-201ENST00000391022 107 ntBASIC1.23□□□□□ -2.21
PTPN22Q9Y2R2 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
PTPN22Q9Y2R2 Y_RNA.681-201ENST00000516445 113 ntBASIC1.23□□□□□ -2.21
PTPN22Q9Y2R2 SNORA18.5-201ENST00000516616 101 ntBASIC1.23□□□□□ -2.21
PTPN22Q9Y2R2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.22□□□□□ -2.21
PTPN22Q9Y2R2 Y_RNA.491-201ENST00000384417 107 ntBASIC1.22□□□□□ -2.21
PTPN22Q9Y2R2 RNA5SP292-201ENST00000390974 118 ntBASIC1.22□□□□□ -2.21
PTPN22Q9Y2R2 FGF7P7-201ENST00000514120 227 ntBASIC1.22□□□□□ -2.21
PTPN22Q9Y2R2 Y_RNA.660-201ENST00000516002 120 ntBASIC1.22□□□□□ -2.21
PTPN22Q9Y2R2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.22□□□□□ -2.21
PTPN22Q9Y2R2 RNA5SP245-201ENST00000364239 121 ntBASIC1.21□□□□□ -2.22
PTPN22Q9Y2R2 MIR520F-201ENST00000384824 87 ntBASIC1.21□□□□□ -2.22
PTPN22Q9Y2R2 MIR3973-201ENST00000579824 107 ntBASIC1.21□□□□□ -2.22
PTPN22Q9Y2R2 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
PTPN22Q9Y2R2 AL590095.2-201ENST00000604136 117 ntBASIC1.21□□□□□ -2.22
PTPN22Q9Y2R2 uc_338.16-201ENST00000621804 95 ntBASIC1.21□□□□□ -2.22
PTPN22Q9Y2R2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
PTPN22Q9Y2R2 SNORA63.2-201ENST00000362603 126 ntBASIC1.2□□□□□ -2.22
PTPN22Q9Y2R2 Y_RNA.244-201ENST00000364484 109 ntBASIC1.2□□□□□ -2.22
PTPN22Q9Y2R2 AL606490.4-201ENST00000423117 127 ntBASIC1.2□□□□□ -2.22
PTPN22Q9Y2R2 SNORD124-201ENST00000459577 104 ntBASIC1.2□□□□□ -2.22
PTPN22Q9Y2R2 MIRLET7F1-201ENST00000362202 87 ntBASIC1.19□□□□□ -2.22
PTPN22Q9Y2R2 Y_RNA.115-201ENST00000363272 98 ntBASIC1.19□□□□□ -2.22
PTPN22Q9Y2R2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.19□□□□□ -2.22
PTPN22Q9Y2R2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.19□□□□□ -2.22
PTPN22Q9Y2R2 U7.7-201ENST00000459276 60 ntBASIC1.19□□□□□ -2.22
PTPN22Q9Y2R2 MIR6857-201ENST00000613267 93 ntBASIC1.19□□□□□ -2.22
PTPN22Q9Y2R2 RNU6-664P-201ENST00000362381 107 ntBASIC1.18□□□□□ -2.22
PTPN22Q9Y2R2 RNU6-478P-201ENST00000363904 110 ntBASIC1.18□□□□□ -2.22
PTPN22Q9Y2R2 Y_RNA.239-201ENST00000364444 113 ntBASIC1.18□□□□□ -2.22
PTPN22Q9Y2R2 Y_RNA.433-201ENST00000384089 102 ntBASIC1.18□□□□□ -2.22
PTPN22Q9Y2R2 MIR4696-201ENST00000581431 70 ntBASIC1.18□□□□□ -2.22
PTPN22Q9Y2R2 Y_RNA.32-201ENST00000362589 110 ntBASIC1.17□□□□□ -2.22
PTPN22Q9Y2R2 SNORD101-201ENST00000384027 73 ntBASIC1.17□□□□□ -2.22
PTPN22Q9Y2R2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
PTPN22Q9Y2R2 RNU6-135P-201ENST00000516769 101 ntBASIC1.17□□□□□ -2.22
PTPN22Q9Y2R2 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
PTPN22Q9Y2R2 U6.100-201ENST00000636230 99 ntBASIC1.17□□□□□ -2.22
PTPN22Q9Y2R2 Y_RNA.264-201ENST00000364665 102 ntBASIC1.16□□□□□ -2.22
PTPN22Q9Y2R2 RNU6-686P-201ENST00000364839 107 ntBASIC1.16□□□□□ -2.22
PTPN22Q9Y2R2 SNORD115-44-201ENST00000365391 82 ntBASIC1.16□□□□□ -2.22
PTPN22Q9Y2R2 MIR532-201ENST00000385025 91 ntBASIC1.16□□□□□ -2.22
PTPN22Q9Y2R2 AL450471.1-201ENST00000447509 127 ntBASIC1.16□□□□□ -2.22
PTPN22Q9Y2R2 SNORA31.14-201ENST00000516728 116 ntBASIC1.16□□□□□ -2.22
PTPN22Q9Y2R2 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
PTPN22Q9Y2R2 MIRLET7A1-201ENST00000362295 80 ntBASIC1.15□□□□□ -2.23
PTPN22Q9Y2R2 RNA5SP403-201ENST00000363598 108 ntBASIC1.15□□□□□ -2.23
PTPN22Q9Y2R2 MIR520H-201ENST00000385126 88 ntBASIC1.15□□□□□ -2.23
PTPN22Q9Y2R2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.15□□□□□ -2.23
PTPN22Q9Y2R2 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
PTPN22Q9Y2R2 MIR4662A-201ENST00000637499 67 ntBASIC1.15□□□□□ -2.23
PTPN22Q9Y2R2 RNU6-1296P-201ENST00000383879 107 ntBASIC1.14□□□□□ -2.23
PTPN22Q9Y2R2 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
PTPN22Q9Y2R2 SNORD89-201ENST00000390981 114 ntBASIC1.14□□□□□ -2.23
PTPN22Q9Y2R2 RNU6-935P-201ENST00000410371 100 ntBASIC1.14□□□□□ -2.23
PTPN22Q9Y2R2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
PTPN22Q9Y2R2 RNU6-1094P-201ENST00000362416 104 ntBASIC1.13□□□□□ -2.23
PTPN22Q9Y2R2 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
PTPN22Q9Y2R2 RNY4P3-201ENST00000365254 95 ntBASIC1.13□□□□□ -2.23
PTPN22Q9Y2R2 SNORD77.2-201ENST00000391045 68 ntBASIC1.13□□□□□ -2.23
PTPN22Q9Y2R2 RNU6-380P-201ENST00000410207 107 ntBASIC1.13□□□□□ -2.23
PTPN22Q9Y2R2 MIR4714-201ENST00000580728 77 ntBASIC1.13□□□□□ -2.23
PTPN22Q9Y2R2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PTPN22Q9Y2R2 Y_RNA.221-201ENST00000364248 96 ntBASIC1.12□□□□□ -2.23
PTPN22Q9Y2R2 RNU6-1051P-201ENST00000365471 102 ntBASIC1.12□□□□□ -2.23
PTPN22Q9Y2R2 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
PTPN22Q9Y2R2 RNA5SP330-201ENST00000517096 96 ntBASIC1.12□□□□□ -2.23
PTPN22Q9Y2R2 MIR924-201ENST00000638017 53 ntBASIC1.12□□□□□ -2.23
PTPN22Q9Y2R2 Y_RNA.207-201ENST00000364142 106 ntBASIC1.11□□□□□ -2.23
PTPN22Q9Y2R2 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.11□□□□□ -2.23
PTPN22Q9Y2R2 MIR6513-201ENST00000621188 64 ntBASIC1.11□□□□□ -2.23
PTPN22Q9Y2R2 RNU5F-1-201ENST00000362507 117 ntBASIC1.1□□□□□ -2.23
PTPN22Q9Y2R2 SNORD115-24-201ENST00000363528 82 ntBASIC1.1□□□□□ -2.23
PTPN22Q9Y2R2 RNA5SP117-201ENST00000365294 118 ntBASIC1.1□□□□□ -2.23
PTPN22Q9Y2R2 U3.27-201ENST00000391237 200 ntBASIC1.1□□□□□ -2.23
PTPN22Q9Y2R2 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
PTPN22Q9Y2R2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
PTPN22Q9Y2R2 RNU6-208P-201ENST00000362431 107 ntBASIC1.09□□□□□ -2.23
PTPN22Q9Y2R2 RNU6-161P-201ENST00000363051 106 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 272.7 ms