Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MIR222-201ENST00000384992 110 ntBASIC2.12□□□□□ -2.07
COL17A1Q9UMD9 MIR451A-201ENST00000385059 72 ntBASIC2.12□□□□□ -2.07
COL17A1Q9UMD9 SNORD100-201ENST00000408573 76 ntBASIC2.12□□□□□ -2.07
COL17A1Q9UMD9 Y_RNA.809-201ENST00000516058 95 ntBASIC2.12□□□□□ -2.07
COL17A1Q9UMD9 MIR4491-201ENST00000581087 68 ntBASIC2.12□□□□□ -2.07
COL17A1Q9UMD9 RNU4-58P-201ENST00000363192 141 ntBASIC2.11□□□□□ -2.07
COL17A1Q9UMD9 RNA5SP48-201ENST00000363969 126 ntBASIC2.11□□□□□ -2.07
COL17A1Q9UMD9 RNA5SP299-201ENST00000391203 116 ntBASIC2.11□□□□□ -2.07
COL17A1Q9UMD9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.11□□□□□ -2.07
COL17A1Q9UMD9 RNU6-752P-201ENST00000516376 102 ntBASIC2.11□□□□□ -2.07
COL17A1Q9UMD9 RNU6-122P-201ENST00000516818 107 ntBASIC2.11□□□□□ -2.07
COL17A1Q9UMD9 AC012493.3-201ENST00000604494 112 ntBASIC2.11□□□□□ -2.07
COL17A1Q9UMD9 RNA5SP363-201ENST00000365072 115 ntBASIC2.1□□□□□ -2.07
COL17A1Q9UMD9 SNORA75.1-201ENST00000391130 148 ntBASIC2.1□□□□□ -2.07
COL17A1Q9UMD9 RNU6-1054P-201ENST00000411293 104 ntBASIC2.1□□□□□ -2.07
COL17A1Q9UMD9 AC019176.1-201ENST00000518519 225 ntBASIC2.1□□□□□ -2.07
COL17A1Q9UMD9 AL773524.1-201ENST00000614065 229 ntBASIC2.1□□□□□ -2.07
COL17A1Q9UMD9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
COL17A1Q9UMD9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.1□□□□□ -2.07
COL17A1Q9UMD9 RNU6-935P-201ENST00000410371 100 ntBASIC2.09□□□□□ -2.07
COL17A1Q9UMD9 SNORD111.1-201ENST00000516421 86 ntBASIC2.09□□□□□ -2.07
COL17A1Q9UMD9 MTRNR2L2-201ENST00000604882 87 ntBASIC2.09□□□□□ -2.07
COL17A1Q9UMD9 uc_338.6-201ENST00000613544 171 ntBASIC2.09□□□□□ -2.07
COL17A1Q9UMD9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
COL17A1Q9UMD9 RNU6-1260P-201ENST00000362944 107 ntBASIC2.08□□□□□ -2.08
COL17A1Q9UMD9 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
COL17A1Q9UMD9 RNU6-1165P-201ENST00000410119 107 ntBASIC2.08□□□□□ -2.08
COL17A1Q9UMD9 AC015688.6-201ENST00000577737 104 ntBASIC2.08□□□□□ -2.08
COL17A1Q9UMD9 AC106800.4-201ENST00000614905 153 ntBASIC2.08□□□□□ -2.08
COL17A1Q9UMD9 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.08□□□□□ -2.08
COL17A1Q9UMD9 MIR203A-201ENST00000384836 110 ntBASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 AC013244.2-201ENST00000603396 103 ntBASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 MIR8074-201ENST00000615081 81 ntBASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 Y_RNA.588-201ENST00000391254 102 ntBASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 MIR4713-201ENST00000582691 75 ntBASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.07□□□□□ -2.08
COL17A1Q9UMD9 MIR101-2-201ENST00000362195 79 ntBASIC2.06□□□□□ -2.08
COL17A1Q9UMD9 RNU6-403P-201ENST00000363163 104 ntBASIC2.06□□□□□ -2.08
COL17A1Q9UMD9 SNORA25.3-201ENST00000363205 127 ntBASIC2.06□□□□□ -2.08
COL17A1Q9UMD9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL17A1Q9UMD9 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
COL17A1Q9UMD9 MIR3122-201ENST00000577243 73 ntBASIC2.06□□□□□ -2.08
COL17A1Q9UMD9 RNU6-92P-201ENST00000605893 104 ntBASIC2.06□□□□□ -2.08
COL17A1Q9UMD9 SNORD60.1-201ENST00000362451 73 ntBASIC2.05□□□□□ -2.08
COL17A1Q9UMD9 RNU6-645P-201ENST00000364649 106 ntBASIC2.05□□□□□ -2.08
COL17A1Q9UMD9 MIR519A1-201ENST00000385257 85 ntBASIC2.05□□□□□ -2.08
COL17A1Q9UMD9 MIR1304-201ENST00000408243 91 ntBASIC2.05□□□□□ -2.08
COL17A1Q9UMD9 RNA5SP476-201ENST00000516613 103 ntBASIC2.05□□□□□ -2.08
COL17A1Q9UMD9 SNORD93-201ENST00000408813 74 ntBASIC2.04□□□□□ -2.08
COL17A1Q9UMD9 MIR1302-7-201ENST00000408841 72 ntBASIC2.04□□□□□ -2.08
COL17A1Q9UMD9 RNU6-922P-201ENST00000516753 99 ntBASIC2.04□□□□□ -2.08
COL17A1Q9UMD9 Y_RNA.697-201ENST00000516776 113 ntBASIC2.04□□□□□ -2.08
COL17A1Q9UMD9 MIR548H5-201ENST00000580314 60 ntBASIC2.04□□□□□ -2.08
COL17A1Q9UMD9 GHRLOS.1-201ENST00000610995 70 ntBASIC2.04□□□□□ -2.08
COL17A1Q9UMD9 MIR373-201ENST00000362273 69 ntBASIC2.03□□□□□ -2.08
COL17A1Q9UMD9 RNU6-35P-201ENST00000384530 107 ntBASIC2.03□□□□□ -2.08
COL17A1Q9UMD9 RNU7-62P-201ENST00000458856 62 ntBASIC2.03□□□□□ -2.08
COL17A1Q9UMD9 MIR6509-201ENST00000614603 85 ntBASIC2.03□□□□□ -2.08
COL17A1Q9UMD9 AC073869.9-201ENST00000641610 120 ntBASIC2.03□□□□□ -2.08
COL17A1Q9UMD9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COL17A1Q9UMD9 SNORD33-201ENST00000362761 85 ntBASIC2.02□□□□□ -2.09
COL17A1Q9UMD9 RNU6-1039P-201ENST00000383931 107 ntBASIC2.02□□□□□ -2.09
COL17A1Q9UMD9 RNA5SP61-201ENST00000516453 100 ntBASIC2.02□□□□□ -2.09
COL17A1Q9UMD9 RNU6-396P-201ENST00000365369 105 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 NAMPTP3-201ENST00000569273 224 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 MIR548V-201ENST00000584165 80 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 RNU7-10P-201ENST00000607194 63 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 Y_RNA.68-201ENST00000362881 102 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 MT-TF-201ENST00000387314 71 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 snoU13.9-201ENST00000458927 103 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 uc_338.10-201ENST00000621872 182 ntBASIC2.01□□□□□ -2.09
COL17A1Q9UMD9 Y_RNA.56-201ENST00000362798 112 ntBASIC2□□□□□ -2.09
COL17A1Q9UMD9 RNU1-36P-201ENST00000365130 165 ntBASIC2□□□□□ -2.09
COL17A1Q9UMD9 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
COL17A1Q9UMD9 MIR4264-201ENST00000583520 66 ntBASIC2□□□□□ -2.09
COL17A1Q9UMD9 MIR3192-201ENST00000584920 77 ntBASIC2□□□□□ -2.09
COL17A1Q9UMD9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 RNA5SP215-201ENST00000363440 122 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 MIR599-201ENST00000385069 95 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 U3.27-201ENST00000391237 200 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 SNORD75.2-201ENST00000408784 58 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 RNU6-287P-201ENST00000516230 98 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 RNU6-980P-201ENST00000516925 103 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 RNU6-902P-201ENST00000517212 91 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 AC103810.8-201ENST00000607347 118 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 MIR8063-201ENST00000621930 81 ntBASIC1.99□□□□□ -2.09
COL17A1Q9UMD9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
COL17A1Q9UMD9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.98□□□□□ -2.09
COL17A1Q9UMD9 RNU6-930P-201ENST00000390938 100 ntBASIC1.98□□□□□ -2.09
COL17A1Q9UMD9 RNU6-947P-201ENST00000516264 106 ntBASIC1.98□□□□□ -2.09
COL17A1Q9UMD9 MIR4299-201ENST00000577899 72 ntBASIC1.98□□□□□ -2.09
COL17A1Q9UMD9 MIR630-201ENST00000384957 97 ntBASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 MIR30A-201ENST00000385092 71 ntBASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 SNORD41-201ENST00000386967 70 ntBASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 AC097635.1-201ENST00000450678 155 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms