Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNA5SP117-201ENST00000365294 118 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.491-201ENST00000384417 107 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 MIR548J-201ENST00000408833 112 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 RNU6-135P-201ENST00000516769 101 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 MIR4796-201ENST00000580742 81 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
CDC42EP3Q9UKI2 MIRLET7F1-201ENST00000362202 87 ntBASIC1.06□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.374-201ENST00000365606 101 ntBASIC1.06□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.437-201ENST00000384113 113 ntBASIC1.06□□□□□ -2.24
CDC42EP3Q9UKI2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.06□□□□□ -2.24
CDC42EP3Q9UKI2 SNORD115-24-201ENST00000363528 82 ntBASIC1.05□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.313-201ENST00000365095 103 ntBASIC1.05□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.316-201ENST00000365118 111 ntBASIC1.05□□□□□ -2.24
CDC42EP3Q9UKI2 SNORD101-201ENST00000384027 73 ntBASIC1.05□□□□□ -2.24
CDC42EP3Q9UKI2 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
CDC42EP3Q9UKI2 RNU7-161P-201ENST00000517289 62 ntBASIC1.05□□□□□ -2.24
CDC42EP3Q9UKI2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.239-201ENST00000364444 113 ntBASIC1.04□□□□□ -2.24
CDC42EP3Q9UKI2 SNORD115-44-201ENST00000365391 82 ntBASIC1.04□□□□□ -2.24
CDC42EP3Q9UKI2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CDC42EP3Q9UKI2 MIR644A-201ENST00000385262 94 ntBASIC1.04□□□□□ -2.24
CDC42EP3Q9UKI2 MIR1255A-201ENST00000408338 113 ntBASIC1.04□□□□□ -2.24
CDC42EP3Q9UKI2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
CDC42EP3Q9UKI2 MIR4639-201ENST00000584938 69 ntBASIC1.04□□□□□ -2.24
CDC42EP3Q9UKI2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDC42EP3Q9UKI2 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
CDC42EP3Q9UKI2 RNU6-557P-201ENST00000516842 110 ntBASIC1.03□□□□□ -2.24
CDC42EP3Q9UKI2 AC068338.1-201ENST00000565567 176 ntBASIC1.03□□□□□ -2.24
CDC42EP3Q9UKI2 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
CDC42EP3Q9UKI2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDC42EP3Q9UKI2 Y_RNA.207-201ENST00000364142 106 ntBASIC1.02□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-652P-201ENST00000365488 107 ntBASIC1.02□□□□□ -2.25
CDC42EP3Q9UKI2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
CDC42EP3Q9UKI2 SNORD28-201ENST00000384706 75 ntBASIC1.02□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-279P-201ENST00000391297 101 ntBASIC1.02□□□□□ -2.25
CDC42EP3Q9UKI2 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
CDC42EP3Q9UKI2 SNORD18A-201ENST00000363753 72 ntBASIC1.01□□□□□ -2.25
CDC42EP3Q9UKI2 AC244098.3-201ENST00000424803 96 ntBASIC1.01□□□□□ -2.25
CDC42EP3Q9UKI2 MIR3678-201ENST00000578455 94 ntBASIC1.01□□□□□ -2.25
CDC42EP3Q9UKI2 MIR3920-201ENST00000581751 86 ntBASIC1.01□□□□□ -2.25
CDC42EP3Q9UKI2 SNORA63.2-201ENST00000362603 126 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 Y_RNA.94-201ENST00000363068 106 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-129P-201ENST00000391022 107 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 SNORD99-201ENST00000408612 74 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-935P-201ENST00000410371 100 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-287P-201ENST00000516230 98 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 RNA5SP47-201ENST00000517230 109 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 RN7SL793P-201ENST00000583259 296 ntBASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-315P-201ENST00000362666 107 ntBASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 SNORD90-201ENST00000391145 111 ntBASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 FGF7P7-201ENST00000514120 227 ntBASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-469P-201ENST00000516253 101 ntBASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 RNU7-13P-201ENST00000516413 62 ntBASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.99□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-478P-201ENST00000363904 110 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 MIR216A-201ENST00000385063 110 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 SNORD41.1-201ENST00000391000 69 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 RNA5SP225-201ENST00000410874 135 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-638P-201ENST00000516582 104 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 MIR548AG2-201ENST00000581228 64 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 MIR4712-201ENST00000583750 82 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 AC244669.1-204ENST00000621564 178 ntBASIC0.98□□□□□ -2.25
CDC42EP3Q9UKI2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 MIR18A-201ENST00000362310 71 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 RNU6-1051P-201ENST00000365471 102 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 AL450471.1-201ENST00000447509 127 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 Y_RNA.660-201ENST00000516002 120 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 AC011195.1-201ENST00000578177 177 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 MIR4661-201ENST00000582720 75 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 AC067863.3-201ENST00000624172 122 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 MIR6828-201ENST00000636181 60 ntBASIC0.97□□□□□ -2.25
CDC42EP3Q9UKI2 MIR2113-201ENST00000459007 91 ntBASIC0.96□□□□□ -2.26
CDC42EP3Q9UKI2 RNU7-104P-201ENST00000459398 79 ntBASIC0.96□□□□□ -2.26
CDC42EP3Q9UKI2 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
CDC42EP3Q9UKI2 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
CDC42EP3Q9UKI2 U3.27-201ENST00000391237 200 ntBASIC0.95□□□□□ -2.26
CDC42EP3Q9UKI2 RNU6-857P-201ENST00000515893 110 ntBASIC0.95□□□□□ -2.26
CDC42EP3Q9UKI2 MIRLET7A1-201ENST00000362295 80 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 RNU6-726P-201ENST00000364680 107 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 RNU6-686P-201ENST00000364839 107 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 RNY4P3-201ENST00000365254 95 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 SNORA24B-201ENST00000384176 131 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 RNU6-24P-201ENST00000384440 107 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 MIR617-201ENST00000385030 97 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 snoU13.17-201ENST00000458802 104 ntBASIC0.94□□□□□ -2.26
CDC42EP3Q9UKI2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms