Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6-1125P-201ENST00000363601 107 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 RNY1P1-201ENST00000364372 112 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 Y_RNA.283-201ENST00000364798 112 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 SNORD116-22-201ENST00000384430 92 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 RNU6-535P-201ENST00000384722 107 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 MIR5588-201ENST00000581890 63 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 uc_338.16-201ENST00000621804 95 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 AC006160.2-201ENST00000637708 154 ntBASIC0.6□□□□□ -2.31
CLIP2Q9UDT6 MIR101-2-201ENST00000362195 79 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 RNU6-633P-201ENST00000362612 103 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 Y_RNA.313-201ENST00000365095 103 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 RNU6-480P-201ENST00000384332 107 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 RNU6-1254P-201ENST00000391266 104 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 MIR1302-4-201ENST00000408701 150 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 Y_RNA.648-201ENST00000459455 110 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 SNORA72.7-201ENST00000516349 94 ntBASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.59□□□□□ -2.31
CLIP2Q9UDT6 Y_RNA.56-201ENST00000362798 112 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 MIR635-201ENST00000384830 98 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 RNU6-243P-201ENST00000391140 107 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 RNU6-519P-201ENST00000410590 108 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 Y_RNA.809-201ENST00000516058 95 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 RNU6-765P-201ENST00000516916 99 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 RNU7-161P-201ENST00000517289 62 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 IGLL4P-201ENST00000614590 133 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 TRDV1-202ENST00000621643 102 ntBASIC0.58□□□□□ -2.32
CLIP2Q9UDT6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 RNU6-1276P-201ENST00000365372 104 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 RNU6-1124P-201ENST00000384169 107 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 MIR7-2-201ENST00000384970 110 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 MIR599-201ENST00000385069 95 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 MIR1255A-201ENST00000408338 113 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 MIR3064-201ENST00000581130 66 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 MIR548AG2-201ENST00000581228 64 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.57□□□□□ -2.32
CLIP2Q9UDT6 AC002350.1-201ENST00000490759 375 ntBASIC0.56□□□□□ -2.32
CLIP2Q9UDT6 RNU6-1265P-201ENST00000516342 103 ntBASIC0.56□□□□□ -2.32
CLIP2Q9UDT6 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
CLIP2Q9UDT6 MIR3140-201ENST00000583685 90 ntBASIC0.56□□□□□ -2.32
CLIP2Q9UDT6 RNU6-1260P-201ENST00000362944 107 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 RNU6-478P-201ENST00000363904 110 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 RNU6-820P-201ENST00000384273 107 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 MIR519A1-201ENST00000385257 85 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 RNU6-1275P-201ENST00000391087 107 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 AL450471.1-201ENST00000447509 127 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 SNORA18.5-201ENST00000516616 101 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 MIR548H5-201ENST00000580314 60 ntBASIC0.55□□□□□ -2.32
CLIP2Q9UDT6 Y_RNA.96-201ENST00000363092 109 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 SNORD115-24-201ENST00000363528 82 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 RNU6-652P-201ENST00000365488 107 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 Y_RNA.437-201ENST00000384113 113 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 MIR573-201ENST00000384964 99 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 MIR519C-201ENST00000385053 87 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 AC097635.1-201ENST00000450678 155 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 AC244505.6-201ENST00000452829 130 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 snoU13.17-201ENST00000458802 104 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 RNU7-171P-201ENST00000459581 62 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 AP003327.1-201ENST00000529684 127 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 AC140658.3-201ENST00000567603 271 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 MIR3612-201ENST00000579753 87 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 MIR4696-201ENST00000581431 70 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 MIR4536-1-201ENST00000583537 88 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 AC104996.3-201ENST00000590718 94 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 MIR6779-201ENST00000617283 64 ntBASIC0.54□□□□□ -2.32
CLIP2Q9UDT6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 Y_RNA.94-201ENST00000363068 106 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 SNORA36.1-201ENST00000363424 132 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 RNA5SP403-201ENST00000363598 108 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 Y_RNA.316-201ENST00000365118 111 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 SNORD78.1-201ENST00000390866 65 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 RNU6-466P-201ENST00000391224 103 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 RNU6-1052P-201ENST00000411398 104 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 SNORA25.13-201ENST00000516395 103 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 RNA5SP395-201ENST00000516567 118 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 RNU6-719P-201ENST00000516671 104 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 MIR4796-201ENST00000580742 81 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
CLIP2Q9UDT6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.52□□□□□ -2.33
CLIP2Q9UDT6 Y_RNA.205-201ENST00000364128 113 ntBASIC0.52□□□□□ -2.33
CLIP2Q9UDT6 Y_RNA.207-201ENST00000364142 106 ntBASIC0.52□□□□□ -2.33
CLIP2Q9UDT6 RNU6-811P-201ENST00000384069 107 ntBASIC0.52□□□□□ -2.33
CLIP2Q9UDT6 Y_RNA.491-201ENST00000384417 107 ntBASIC0.52□□□□□ -2.33
CLIP2Q9UDT6 Y_RNA.532-201ENST00000384590 113 ntBASIC0.52□□□□□ -2.33
CLIP2Q9UDT6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.52□□□□□ -2.33
CLIP2Q9UDT6 MIR2113-201ENST00000459007 91 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 222 ms