Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-806P-201ENST00000365147 105 ntBASIC-2.17□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.17□□□□□ -2.76
VPS29Q9UBQ0 MIR1255B2-201ENST00000408618 67 ntBASIC-2.17□□□□□ -2.76
VPS29Q9UBQ0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.17□□□□□ -2.76
VPS29Q9UBQ0 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.17□□□□□ -2.76
VPS29Q9UBQ0 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 SNORD115-19-201ENST00000363098 82 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 SNORD115-18-201ENST00000363293 82 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 SNORD115-17-201ENST00000364612 82 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 FGF7P6-202ENST00000451282 293 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 AL512310.12-203ENST00000640543 90 ntBASIC-2.18□□□□□ -2.76
VPS29Q9UBQ0 SNORD38.1-201ENST00000363863 68 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 SNORA7.5-201ENST00000410672 110 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 MTND5P22-201ENST00000458380 195 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 MIR4282-201ENST00000583613 67 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 MIR1255B1-201ENST00000636325 63 ntBASIC-2.19□□□□□ -2.76
VPS29Q9UBQ0 RNA5SP331-201ENST00000364986 107 ntBASIC-2.2□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.2□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.2□□□□□ -2.76
VPS29Q9UBQ0 U2.14-201ENST00000615943 113 ntBASIC-2.2□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 RNU6-818P-201ENST00000364837 108 ntBASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.21□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.22□□□□□ -2.76
VPS29Q9UBQ0 RNU6-80P-201ENST00000384195 107 ntBASIC-2.22□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.22□□□□□ -2.76
VPS29Q9UBQ0 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.22□□□□□ -2.76
VPS29Q9UBQ0 MIR3140-201ENST00000583685 90 ntBASIC-2.22□□□□□ -2.76
VPS29Q9UBQ0 AL132765.2-201ENST00000610812 351 ntBASIC-2.22□□□□□ -2.76
VPS29Q9UBQ0 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.23□□□□□ -2.77
VPS29Q9UBQ0 RNU6-623P-201ENST00000363143 105 ntBASIC-2.23□□□□□ -2.77
VPS29Q9UBQ0 RNU6-508P-201ENST00000363231 103 ntBASIC-2.23□□□□□ -2.77
VPS29Q9UBQ0 SNORA33.1-201ENST00000364957 130 ntBASIC-2.23□□□□□ -2.77
VPS29Q9UBQ0 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.23□□□□□ -2.77
VPS29Q9UBQ0 MIR548A1-201ENST00000385041 97 ntBASIC-2.23□□□□□ -2.77
VPS29Q9UBQ0 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.23□□□□□ -2.77
VPS29Q9UBQ0 SNORA63.2-201ENST00000362603 126 ntBASIC-2.24□□□□□ -2.77
VPS29Q9UBQ0 RNU6-540P-201ENST00000384622 101 ntBASIC-2.24□□□□□ -2.77
VPS29Q9UBQ0 RNU6-983P-201ENST00000516004 103 ntBASIC-2.24□□□□□ -2.77
VPS29Q9UBQ0 RNU6-65P-201ENST00000516332 98 ntBASIC-2.24□□□□□ -2.77
VPS29Q9UBQ0 AC026407.1-201ENST00000518369 204 ntBASIC-2.24□□□□□ -2.77
VPS29Q9UBQ0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.24□□□□□ -2.77
VPS29Q9UBQ0 MT-TI-201ENST00000387365 69 ntBASIC-2.25□□□□□ -2.77
VPS29Q9UBQ0 MIR548H1-201ENST00000408610 102 ntBASIC-2.25□□□□□ -2.77
VPS29Q9UBQ0 SNORD75.2-201ENST00000408784 58 ntBASIC-2.25□□□□□ -2.77
VPS29Q9UBQ0 CYP3A54P-201ENST00000566950 75 ntBASIC-2.25□□□□□ -2.77
VPS29Q9UBQ0 MIR4536-1-201ENST00000583537 88 ntBASIC-2.25□□□□□ -2.77
VPS29Q9UBQ0 AL137067.1-201ENST00000615933 120 ntBASIC-2.25□□□□□ -2.77
VPS29Q9UBQ0 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 RNA5SP86-201ENST00000390869 98 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 Z83846.1-201ENST00000446798 265 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 RNU7-24P-201ENST00000458867 62 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 RNA5SP147-201ENST00000516493 109 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 MIR4490-201ENST00000582647 84 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 AC090971.5-201ENST00000621102 293 ntBASIC-2.26□□□□□ -2.77
VPS29Q9UBQ0 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.27□□□□□ -2.77
VPS29Q9UBQ0 RNU6-768P-201ENST00000384683 107 ntBASIC-2.27□□□□□ -2.77
VPS29Q9UBQ0 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.27□□□□□ -2.77
VPS29Q9UBQ0 AC021753.1-201ENST00000635724 168 ntBASIC-2.27□□□□□ -2.77
VPS29Q9UBQ0 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.28□□□□□ -2.77
VPS29Q9UBQ0 MIR1468-201ENST00000410600 86 ntBASIC-2.28□□□□□ -2.77
VPS29Q9UBQ0 RPL35AP4-201ENST00000412007 102 ntBASIC-2.28□□□□□ -2.77
VPS29Q9UBQ0 snoU13.17-201ENST00000458802 104 ntBASIC-2.28□□□□□ -2.77
VPS29Q9UBQ0 AP002795.1-201ENST00000534879 84 ntBASIC-2.28□□□□□ -2.77
VPS29Q9UBQ0 MIR3163-201ENST00000581592 73 ntBASIC-2.28□□□□□ -2.77
VPS29Q9UBQ0 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.29□□□□□ -2.78
VPS29Q9UBQ0 SNORA24B-201ENST00000384176 131 ntBASIC-2.29□□□□□ -2.78
VPS29Q9UBQ0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.29□□□□□ -2.78
VPS29Q9UBQ0 MIR5683-201ENST00000636514 76 ntBASIC-2.29□□□□□ -2.78
VPS29Q9UBQ0 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 RNU6-309P-201ENST00000364573 106 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 RNU6-275P-201ENST00000364910 107 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 RNU6-260P-201ENST00000384092 107 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 AC090616.4-201ENST00000448026 115 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 RNU6-732P-201ENST00000516033 103 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 RNU6-168P-201ENST00000516189 101 ntBASIC-2.3□□□□□ -2.78
VPS29Q9UBQ0 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms