Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-466P-201ENST00000391224 103 ntBASIC-0.51□□□□□ -2.49
CLCF1Q9UBD9 AC114755.3-201ENST00000481111 251 ntBASIC-0.51□□□□□ -2.49
CLCF1Q9UBD9 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.51□□□□□ -2.49
CLCF1Q9UBD9 AC007012.1-201ENST00000567192 175 ntBASIC-0.51□□□□□ -2.49
CLCF1Q9UBD9 AC099654.10-201ENST00000640395 161 ntBASIC-0.51□□□□□ -2.49
CLCF1Q9UBD9 MIR20A-201ENST00000362279 71 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 MIR539-201ENST00000365690 78 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 SNORD126-201ENST00000459475 77 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 RNU6-781P-201ENST00000516377 101 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 RNA5SP169-201ENST00000517268 117 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 AL442128.1-201ENST00000615151 90 ntBASIC-0.52□□□□□ -2.49
CLCF1Q9UBD9 MIR101-1-201ENST00000362265 75 ntBASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 SNORD101-201ENST00000384027 73 ntBASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 AL353813.1-201ENST00000440700 253 ntBASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 RNU6-182P-201ENST00000516970 105 ntBASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 MIR3144-201ENST00000579460 79 ntBASIC-0.53□□□□□ -2.49
CLCF1Q9UBD9 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.54□□□□□ -2.5
CLCF1Q9UBD9 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.54□□□□□ -2.5
CLCF1Q9UBD9 RNU6-804P-201ENST00000384286 107 ntBASIC-0.54□□□□□ -2.5
CLCF1Q9UBD9 AC096720.1-201ENST00000604441 183 ntBASIC-0.54□□□□□ -2.5
CLCF1Q9UBD9 AC025166.1-201ENST00000612411 163 ntBASIC-0.54□□□□□ -2.5
CLCF1Q9UBD9 RNU6-664P-201ENST00000362381 107 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 MIR569-201ENST00000385228 96 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 RNU6-816P-201ENST00000390914 107 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 AC244090.1-201ENST00000441884 93 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 MIR8064-201ENST00000612863 90 ntBASIC-0.55□□□□□ -2.5
CLCF1Q9UBD9 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 RNU6-455P-201ENST00000384681 107 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 Z95118.1-201ENST00000421372 247 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 AL445193.1-201ENST00000441183 141 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 MIR4696-201ENST00000581431 70 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 MIR4436A-201ENST00000585278 85 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 uc_338.36-201ENST00000622331 158 ntBASIC-0.56□□□□□ -2.5
CLCF1Q9UBD9 MTND5P18-201ENST00000445624 1801 ntBASIC-0.57□□□□□ -2.5
CLCF1Q9UBD9 SNORD58C-201ENST00000365223 64 ntBASIC-0.57□□□□□ -2.5
CLCF1Q9UBD9 MIR652-201ENST00000385278 98 ntBASIC-0.57□□□□□ -2.5
CLCF1Q9UBD9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.57□□□□□ -2.5
CLCF1Q9UBD9 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.57□□□□□ -2.5
CLCF1Q9UBD9 AL353621.2-201ENST00000605340 133 ntBASIC-0.57□□□□□ -2.5
CLCF1Q9UBD9 FTX_2.1-201ENST00000618816 94 ntBASIC-0.57□□□□□ -2.5
CLCF1Q9UBD9 RNU6-235P-201ENST00000362644 107 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 RNU6-935P-201ENST00000410371 100 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 AP000676.1-201ENST00000533307 52 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 MIR4432-201ENST00000581823 84 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 MIR548O2-201ENST00000616090 70 ntBASIC-0.58□□□□□ -2.5
CLCF1Q9UBD9 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.59□□□□□ -2.5
CLCF1Q9UBD9 MIR1265-201ENST00000408444 86 ntBASIC-0.59□□□□□ -2.5
CLCF1Q9UBD9 snoU13.11-201ENST00000459219 104 ntBASIC-0.59□□□□□ -2.5
CLCF1Q9UBD9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.59□□□□□ -2.5
CLCF1Q9UBD9 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.6□□□□□ -2.51
CLCF1Q9UBD9 MIR9-2-201ENST00000384838 87 ntBASIC-0.6□□□□□ -2.51
CLCF1Q9UBD9 MIR604-201ENST00000384880 94 ntBASIC-0.6□□□□□ -2.51
CLCF1Q9UBD9 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.6□□□□□ -2.51
CLCF1Q9UBD9 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.6□□□□□ -2.51
CLCF1Q9UBD9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.6□□□□□ -2.51
CLCF1Q9UBD9 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 RNA5SP25-201ENST00000410815 110 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 SNORD2-201ENST00000459163 69 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 RNA5SP476-201ENST00000516613 103 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 RNU6-86P-201ENST00000606534 107 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 MIR6086-201ENST00000638065 55 ntBASIC-0.61□□□□□ -2.51
CLCF1Q9UBD9 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 RNU6-900P-201ENST00000384498 102 ntBASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 SNORD56B-201ENST00000384713 71 ntBASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 U3.27-201ENST00000391237 200 ntBASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 AC097510.1-201ENST00000510945 133 ntBASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.62□□□□□ -2.51
CLCF1Q9UBD9 RNU6-886P-201ENST00000384319 105 ntBASIC-0.63□□□□□ -2.51
CLCF1Q9UBD9 RPS29P8-201ENST00000445109 171 ntBASIC-0.63□□□□□ -2.51
CLCF1Q9UBD9 RNU6-426P-201ENST00000516464 97 ntBASIC-0.63□□□□□ -2.51
CLCF1Q9UBD9 MTND5P41-201ENST00000517498 206 ntBASIC-0.63□□□□□ -2.51
CLCF1Q9UBD9 MIR4694-201ENST00000578534 80 ntBASIC-0.63□□□□□ -2.51
CLCF1Q9UBD9 AC093726.3-201ENST00000637588 150 ntBASIC-0.63□□□□□ -2.51
CLCF1Q9UBD9 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 SNORD114-4-201ENST00000363962 75 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 MIR451A-201ENST00000385059 72 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 MIR577-201ENST00000385196 96 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 SNORA49-201ENST00000386157 136 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 SNORA3B-201ENST00000391305 131 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 snoU13.13-201ENST00000458842 104 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 RNA5SP272-201ENST00000516095 111 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms