Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RNA5SP117-201ENST00000365294 118 ntBASIC0.88□□□□□ -2.27
DNMT3BQ9UBC3 MIR635-201ENST00000384830 98 ntBASIC0.88□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.648-201ENST00000459455 110 ntBASIC0.88□□□□□ -2.27
DNMT3BQ9UBC3 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
DNMT3BQ9UBC3 MIR4536-1-201ENST00000583537 88 ntBASIC0.88□□□□□ -2.27
DNMT3BQ9UBC3 U6.100-201ENST00000636230 99 ntBASIC0.88□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.426-201ENST00000384068 113 ntBASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 MIR4666B-201ENST00000578142 81 ntBASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 RNU7-10P-201ENST00000607194 63 ntBASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.87□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.316-201ENST00000365118 111 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 AL450471.1-201ENST00000447509 127 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 AC002350.1-201ENST00000490759 375 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 RNU6-65P-201ENST00000516332 98 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 MIR3612-201ENST00000579753 87 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 TRDV1-202ENST00000621643 102 ntBASIC0.86□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 RNA5SP325-201ENST00000363756 130 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 MIR599-201ENST00000385069 95 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 AC093729.1-201ENST00000513074 128 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 SNORA25.13-201ENST00000516395 103 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 RNA5SP395-201ENST00000516567 118 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 SNORA18.5-201ENST00000516616 101 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 SNORA31.14-201ENST00000516728 116 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 AC140658.3-201ENST00000567603 271 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 MIR548H5-201ENST00000580314 60 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 MIR3064-201ENST00000581130 66 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 RN7SL793P-201ENST00000583259 296 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 MIR3202-2-201ENST00000635980 79 ntBASIC0.85□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.94-201ENST00000363068 106 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 RNU6-478P-201ENST00000363904 110 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 RNU4-45P-201ENST00000365469 141 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 RNU6-811P-201ENST00000384069 107 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 RNU6-466P-201ENST00000391224 103 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 MIR889-201ENST00000401280 79 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.84□□□□□ -2.27
DNMT3BQ9UBC3 MIR644A-201ENST00000385262 94 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 Y_RNA.607-201ENST00000410597 98 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 RNA5SP222-201ENST00000411039 105 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-857P-201ENST00000515893 110 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-469P-201ENST00000516253 101 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 Y_RNA.685-201ENST00000516532 108 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-638P-201ENST00000516582 104 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 MIR4796-201ENST00000580742 81 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 AC104996.3-201ENST00000590718 94 ntBASIC0.83□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-1260P-201ENST00000362944 107 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 Y_RNA.244-201ENST00000364484 109 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 MIR216A-201ENST00000385063 110 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 MIR1236-201ENST00000408340 102 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 MIR3140-201ENST00000583685 90 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 uc_338.16-201ENST00000621804 95 ntBASIC0.82□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-161P-201ENST00000363051 106 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 SNORD115-37-201ENST00000363768 82 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 AC097635.1-201ENST00000450678 155 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-719P-201ENST00000516671 104 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 MIR4696-201ENST00000581431 70 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
DNMT3BQ9UBC3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 MIR18A-201ENST00000362310 71 ntBASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 snoU13.17-201ENST00000458802 104 ntBASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-135P-201ENST00000516769 101 ntBASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 AC138907.6-201ENST00000568401 126 ntBASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 AC138869.1-201ENST00000568623 124 ntBASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 MIR4712-201ENST00000583750 82 ntBASIC0.8□□□□□ -2.28
DNMT3BQ9UBC3 SNORD115-24-201ENST00000363528 82 ntBASIC0.79□□□□□ -2.28
DNMT3BQ9UBC3 MIR519A1-201ENST00000385257 85 ntBASIC0.79□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-279P-201ENST00000391297 101 ntBASIC0.79□□□□□ -2.28
DNMT3BQ9UBC3 RNU7-161P-201ENST00000517289 62 ntBASIC0.79□□□□□ -2.28
DNMT3BQ9UBC3 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
DNMT3BQ9UBC3 Y_RNA.788-201ENST00000622394 112 ntBASIC0.79□□□□□ -2.28
DNMT3BQ9UBC3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-664P-201ENST00000362381 107 ntBASIC0.78□□□□□ -2.28
DNMT3BQ9UBC3 SNORD101-201ENST00000384027 73 ntBASIC0.78□□□□□ -2.28
DNMT3BQ9UBC3 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
DNMT3BQ9UBC3 AC244505.6-201ENST00000452829 130 ntBASIC0.78□□□□□ -2.28
DNMT3BQ9UBC3 FGF7P7-201ENST00000514120 227 ntBASIC0.78□□□□□ -2.28
DNMT3BQ9UBC3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.78□□□□□ -2.28
DNMT3BQ9UBC3 SNORA63.2-201ENST00000362603 126 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms