Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MIR4460-201ENST00000577862 86 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 uc_338.36-201ENST00000622331 158 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 AC093726.3-201ENST00000637588 150 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 RNU6-379P-201ENST00000363813 104 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 RNU6-337P-201ENST00000391243 106 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 RNU7-197P-201ENST00000458836 62 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 SNORD38.3-201ENST00000516599 73 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 MIR6851-201ENST00000617060 67 ntBASIC-0.4□□□□□ -2.47
CCDC88CQ9P219 RNU6-495P-201ENST00000362995 107 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 RNU6-682P-201ENST00000363843 106 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 SNORA20.1-201ENST00000364790 130 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 SNORD101-201ENST00000384027 73 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 MIR548H3-201ENST00000408771 118 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 AL513043.2-201ENST00000573941 143 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 AC072026.1-201ENST00000605023 201 ntBASIC-0.41□□□□□ -2.47
CCDC88CQ9P219 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 SNORA3B-201ENST00000391305 131 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-284P-201ENST00000411105 106 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 AC107027.2-201ENST00000512197 115 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-388P-201ENST00000517012 105 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-389P-201ENST00000517048 105 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-86P-201ENST00000606534 107 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 SNORD38.1-201ENST00000363863 68 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-647P-201ENST00000364243 107 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-409P-201ENST00000384114 104 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-80P-201ENST00000384195 107 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-900P-201ENST00000384498 102 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 MIR548E-201ENST00000408287 88 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-721P-201ENST00000410155 105 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 snoU13.17-201ENST00000458802 104 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 snoU13.13-201ENST00000458842 104 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNA5SP272-201ENST00000516095 111 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 RNA5SP66-201ENST00000517178 101 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 AL353621.2-201ENST00000605340 133 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 AC025521.1-201ENST00000621624 286 ntBASIC-0.42□□□□□ -2.48
CCDC88CQ9P219 SNORD50.2-201ENST00000365465 70 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 MIR601-201ENST00000385256 79 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 AC244090.1-201ENST00000441884 93 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 AL118496.2-201ENST00000448300 230 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 RNU7-55P-201ENST00000459426 62 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 MIR196A1-201ENST00000388006 70 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 MIR1263-201ENST00000408324 86 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 MIR3163-201ENST00000581592 73 ntBASIC-0.43□□□□□ -2.48
CCDC88CQ9P219 RNU6-132P-201ENST00000383863 107 ntBASIC-0.44□□□□□ -2.48
CCDC88CQ9P219 SPINT5P-201ENST00000448174 155 ntBASIC-0.44□□□□□ -2.48
CCDC88CQ9P219 RNU6-781P-201ENST00000516377 101 ntBASIC-0.44□□□□□ -2.48
CCDC88CQ9P219 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.44□□□□□ -2.48
CCDC88CQ9P219 AP001094.1-201ENST00000579805 193 ntBASIC-0.44□□□□□ -2.48
CCDC88CQ9P219 TRDV1-202ENST00000621643 102 ntBASIC-0.44□□□□□ -2.48
CCDC88CQ9P219 MTND5P18-201ENST00000445624 1801 ntBASIC-0.44□□□□□ -2.48
CCDC88CQ9P219 MIR148A-201ENST00000362215 68 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 RNU6-476P-201ENST00000384726 107 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR451A-201ENST00000385059 72 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR548G-201ENST00000408442 89 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 RNA5SP136-201ENST00000410906 107 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MTATP6P21-201ENST00000440681 189 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 RNU7-85P-201ENST00000458851 63 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 RNY1P9-201ENST00000532431 109 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR3179-1-201ENST00000578940 84 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR3179-2-201ENST00000579107 84 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR3179-3-201ENST00000579566 84 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR3681-201ENST00000580089 72 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR4723-201ENST00000585070 81 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR548O2-201ENST00000616090 70 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR3179-4-201ENST00000617599 84 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MIR548D2-201ENST00000384955 97 ntBASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
CCDC88CQ9P219 MTND3P2-201ENST00000438452 342 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 847.6 ms