Protein–RNA interactions for Protein: Q9NY72

SCN3B, Sodium channel subunit beta-3, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3BQ9NY72 RNU6-382P-201ENST00000365181 106 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 SNORA7.5-201ENST00000410672 110 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 SNORD2.1-201ENST00000458762 69 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 RNU7-85P-201ENST00000458851 63 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 RNU6-518P-201ENST00000516056 96 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 RNU6-976P-201ENST00000516086 111 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 MIR3657-201ENST00000584818 117 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 AL512310.12-203ENST00000640543 90 ntBASIC-2.31□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.32□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.32□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.32□□□□□ -2.78
SCN3BQ9NY72 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.32□□□□□ -2.78
SCN3BQ9NY72 SNORD116-6-201ENST00000384711 96 ntBASIC-2.32□□□□□ -2.78
SCN3BQ9NY72 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.32□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 SNORD50.2-201ENST00000365465 70 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 MIR521-2-201ENST00000384818 87 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 MIR203A-201ENST00000384836 110 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 MTATP6P21-201ENST00000440681 189 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 MIR3123-201ENST00000583417 75 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 MIR548AM-201ENST00000584298 74 ntBASIC-2.33□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 RNY4P27-201ENST00000363341 96 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 RNU6-312P-201ENST00000364629 107 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 RNU6-643P-201ENST00000384018 107 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 RNU6-121P-201ENST00000410525 99 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 MIR4744-201ENST00000581563 82 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 MIR3611-201ENST00000584484 83 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 AC006254.2-201ENST00000603259 279 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 AC025521.1-201ENST00000621624 286 ntBASIC-2.34□□□□□ -2.78
SCN3BQ9NY72 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 RNU6-608P-201ENST00000383927 104 ntBASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 MIR548Q-201ENST00000408404 100 ntBASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 ELOCP20-201ENST00000422460 345 ntBASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 RNU6-980P-201ENST00000516925 103 ntBASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 MIR3064-201ENST00000581130 66 ntBASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 MIR6509-201ENST00000614603 85 ntBASIC-2.35□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.36□□□□□ -2.79
SCN3BQ9NY72 RNU6-508P-201ENST00000363231 103 ntBASIC-2.36□□□□□ -2.79
SCN3BQ9NY72 U6.106-201ENST00000636360 105 ntBASIC-2.36□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 RNU1-115P-201ENST00000365329 160 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 MIR759-201ENST00000390224 91 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 RNU6-578P-201ENST00000390980 103 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 AL021921.1-201ENST00000442774 93 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 AL137067.1-201ENST00000615933 120 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 AC090574.1-201ENST00000623186 233 ntBASIC-2.37□□□□□ -2.79
SCN3BQ9NY72 RNU6-651P-201ENST00000411040 105 ntBASIC-2.38□□□□□ -2.79
SCN3BQ9NY72 MIR3163-201ENST00000581592 73 ntBASIC-2.38□□□□□ -2.79
SCN3BQ9NY72 RNU6-363P-201ENST00000362895 105 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 RNU6-478P-201ENST00000363904 110 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 RNU6-880P-201ENST00000384526 107 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 MIR548U-201ENST00000390728 81 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 RNU2-38P-201ENST00000410856 79 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 MTND1P29-201ENST00000448112 647 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 RNU7-30P-201ENST00000516835 62 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 AC104996.3-201ENST00000590718 94 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 AC093424.1-201ENST00000604999 338 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.39□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 RNA5SP405-201ENST00000363059 114 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 SNORD90-201ENST00000391145 111 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 RNU6-314P-201ENST00000516574 104 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 AC080013.6-201ENST00000606185 215 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 AL442128.1-201ENST00000615151 90 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 MIR6739-201ENST00000622461 75 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 AC021753.1-201ENST00000635724 168 ntBASIC-2.4□□□□□ -2.79
SCN3BQ9NY72 RNU6-824P-201ENST00000363724 104 ntBASIC-2.41□□□□□ -2.8
SCN3BQ9NY72 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.41□□□□□ -2.8
SCN3BQ9NY72 SNORD116-2-201ENST00000384274 95 ntBASIC-2.41□□□□□ -2.8
SCN3BQ9NY72 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.41□□□□□ -2.8
SCN3BQ9NY72 RNU6-506P-201ENST00000516553 94 ntBASIC-2.41□□□□□ -2.8
SCN3BQ9NY72 MIR23C-201ENST00000579846 100 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms