Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 MIR644A-201ENST00000385262 94 ntBASIC1.11□□□□□ -2.23
CLDND1Q9NY35 MIR3612-201ENST00000579753 87 ntBASIC1.11□□□□□ -2.23
CLDND1Q9NY35 MTRNR2L2-201ENST00000604882 87 ntBASIC1.11□□□□□ -2.23
CLDND1Q9NY35 MIRLET7F1-201ENST00000362202 87 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CLDND1Q9NY35 MIR193B-201ENST00000384907 83 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 RNA5SP292-201ENST00000390974 118 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 SNORD99-201ENST00000408612 74 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 AC093729.1-201ENST00000513074 128 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 RNU7-153P-201ENST00000516455 62 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 RNU6-135P-201ENST00000516769 101 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 AC104996.3-201ENST00000590718 94 ntBASIC1.1□□□□□ -2.23
CLDND1Q9NY35 RNA5SP403-201ENST00000363598 108 ntBASIC1.09□□□□□ -2.23
CLDND1Q9NY35 SNORD115-37-201ENST00000363768 82 ntBASIC1.09□□□□□ -2.23
CLDND1Q9NY35 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CLDND1Q9NY35 MIR548U-201ENST00000390728 81 ntBASIC1.09□□□□□ -2.23
CLDND1Q9NY35 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.09□□□□□ -2.23
CLDND1Q9NY35 RNU7-161P-201ENST00000517289 62 ntBASIC1.09□□□□□ -2.23
CLDND1Q9NY35 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
CLDND1Q9NY35 Y_RNA.596-201ENST00000410462 109 ntBASIC1.08□□□□□ -2.24
CLDND1Q9NY35 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
CLDND1Q9NY35 RNU6-469P-201ENST00000516253 101 ntBASIC1.08□□□□□ -2.24
CLDND1Q9NY35 MIR4696-201ENST00000581431 70 ntBASIC1.08□□□□□ -2.24
CLDND1Q9NY35 MIR1245B-201ENST00000636115 69 ntBASIC1.08□□□□□ -2.24
CLDND1Q9NY35 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CLDND1Q9NY35 RNU6-664P-201ENST00000362381 107 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 Y_RNA.219-201ENST00000364232 113 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 SNORD101-201ENST00000384027 73 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 Y_RNA.491-201ENST00000384417 107 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 Y_RNA.607-201ENST00000410597 98 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 SNORA18.5-201ENST00000516616 101 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 AC140658.3-201ENST00000567603 271 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 AC011195.1-201ENST00000578177 177 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 MIR3973-201ENST00000579824 107 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 MIR4796-201ENST00000580742 81 ntBASIC1.07□□□□□ -2.24
CLDND1Q9NY35 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
CLDND1Q9NY35 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CLDND1Q9NY35 MIR1273G-201ENST00000577677 100 ntBASIC1.06□□□□□ -2.24
CLDND1Q9NY35 MIR3678-201ENST00000578455 94 ntBASIC1.06□□□□□ -2.24
CLDND1Q9NY35 MIR4639-201ENST00000584938 69 ntBASIC1.06□□□□□ -2.24
CLDND1Q9NY35 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
CLDND1Q9NY35 SNORD18A-201ENST00000363753 72 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 Y_RNA.239-201ENST00000364444 113 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 SNORD28-201ENST00000384706 75 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
CLDND1Q9NY35 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 SNORA25.13-201ENST00000516395 103 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 MIR4666B-201ENST00000578142 81 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 AL590095.2-201ENST00000604136 117 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
CLDND1Q9NY35 SNORD115-44-201ENST00000365391 82 ntBASIC1.04□□□□□ -2.24
CLDND1Q9NY35 RNU6-787P-201ENST00000384032 107 ntBASIC1.04□□□□□ -2.24
CLDND1Q9NY35 MIR532-201ENST00000385025 91 ntBASIC1.04□□□□□ -2.24
CLDND1Q9NY35 RNU7-104P-201ENST00000459398 79 ntBASIC1.04□□□□□ -2.24
CLDND1Q9NY35 RNU7-13P-201ENST00000516413 62 ntBASIC1.04□□□□□ -2.24
CLDND1Q9NY35 AC244669.1-204ENST00000621564 178 ntBASIC1.04□□□□□ -2.24
CLDND1Q9NY35 MIR3202-2-201ENST00000635980 79 ntBASIC1.04□□□□□ -2.24
CLDND1Q9NY35 MIR18A-201ENST00000362310 71 ntBASIC1.03□□□□□ -2.24
CLDND1Q9NY35 RNA5SP457-201ENST00000363657 124 ntBASIC1.03□□□□□ -2.24
CLDND1Q9NY35 Y_RNA.207-201ENST00000364142 106 ntBASIC1.03□□□□□ -2.24
CLDND1Q9NY35 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.03□□□□□ -2.24
CLDND1Q9NY35 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLDND1Q9NY35 RNU6-1229P-201ENST00000364295 107 ntBASIC1.02□□□□□ -2.25
CLDND1Q9NY35 SNORD78.1-201ENST00000390866 65 ntBASIC1.02□□□□□ -2.25
CLDND1Q9NY35 RNA5SP47-201ENST00000517230 109 ntBASIC1.02□□□□□ -2.25
CLDND1Q9NY35 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
CLDND1Q9NY35 MIR3920-201ENST00000581751 86 ntBASIC1.02□□□□□ -2.25
CLDND1Q9NY35 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
CLDND1Q9NY35 Y_RNA.437-201ENST00000384113 113 ntBASIC1.01□□□□□ -2.25
CLDND1Q9NY35 RNU6-287P-201ENST00000516230 98 ntBASIC1.01□□□□□ -2.25
CLDND1Q9NY35 AC067863.3-201ENST00000624172 122 ntBASIC1.01□□□□□ -2.25
CLDND1Q9NY35 RNU6-228P-201ENST00000362700 106 ntBASIC1□□□□□ -2.25
CLDND1Q9NY35 RNU6-1124P-201ENST00000384169 107 ntBASIC1□□□□□ -2.25
CLDND1Q9NY35 RNU6-935P-201ENST00000410371 100 ntBASIC1□□□□□ -2.25
CLDND1Q9NY35 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
CLDND1Q9NY35 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CLDND1Q9NY35 Y_RNA.68-201ENST00000362881 102 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 Y_RNA.115-201ENST00000363272 98 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 RNU6-624P-201ENST00000363411 107 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 Y_RNA.316-201ENST00000365118 111 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 RNU6-1126P-201ENST00000384002 107 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 SNORD90-201ENST00000391145 111 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 MIR548AG2-201ENST00000581228 64 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.99□□□□□ -2.25
CLDND1Q9NY35 Y_RNA.313-201ENST00000365095 103 ntBASIC0.98□□□□□ -2.25
CLDND1Q9NY35 SCARNA16.5-201ENST00000517114 183 ntBASIC0.98□□□□□ -2.25
CLDND1Q9NY35 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CLDND1Q9NY35 RNU6-1051P-201ENST00000365471 102 ntBASIC0.97□□□□□ -2.25
CLDND1Q9NY35 RNU6-652P-201ENST00000365488 107 ntBASIC0.97□□□□□ -2.25
CLDND1Q9NY35 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
CLDND1Q9NY35 RNA5SP222-201ENST00000411039 105 ntBASIC0.97□□□□□ -2.25
CLDND1Q9NY35 MIR2113-201ENST00000459007 91 ntBASIC0.97□□□□□ -2.25
CLDND1Q9NY35 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
CLDND1Q9NY35 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.96□□□□□ -2.26
CLDND1Q9NY35 MIR451A-201ENST00000385059 72 ntBASIC0.96□□□□□ -2.26
CLDND1Q9NY35 SNORD41.1-201ENST00000391000 69 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms