Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 uc_338.36-201ENST00000622331 158 ntBASIC-0.31□□□□□ -2.46
EXOSC3Q9NQT5 AL157777.2-201ENST00000258070 137 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 MIR655-201ENST00000362159 97 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 U8.6-201ENST00000364939 135 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 MT-TY-201ENST00000387409 66 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 RNU6-466P-201ENST00000391224 103 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 MIR1912-201ENST00000410389 80 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 RNU7-107P-201ENST00000459121 61 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 snoU13.11-201ENST00000459219 104 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 AL035470.1-201ENST00000622571 220 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 AL391099.1-201ENST00000624635 187 ntBASIC-0.32□□□□□ -2.46
EXOSC3Q9NQT5 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.33□□□□□ -2.46
EXOSC3Q9NQT5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.33□□□□□ -2.46
EXOSC3Q9NQT5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.33□□□□□ -2.46
EXOSC3Q9NQT5 MIR3666-201ENST00000607845 111 ntBASIC-0.33□□□□□ -2.46
EXOSC3Q9NQT5 SNORD49B-201ENST00000365172 72 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 SNORD101-201ENST00000384027 73 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 RNU6-154P-201ENST00000384306 106 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 MIR577-201ENST00000385196 96 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 RNU6-284P-201ENST00000411105 106 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 AC109327.2-201ENST00000448339 378 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 RNU6-971P-201ENST00000516920 106 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 RNU6-794P-201ENST00000517261 64 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 MIR4436A-201ENST00000585278 85 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.34□□□□□ -2.46
EXOSC3Q9NQT5 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.35□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.35□□□□□ -2.47
EXOSC3Q9NQT5 AC096720.1-201ENST00000604441 183 ntBASIC-0.35□□□□□ -2.47
EXOSC3Q9NQT5 RNA5SP98-201ENST00000363158 137 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-480P-201ENST00000384332 107 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 AC007012.1-201ENST00000567192 175 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 MIR3681-201ENST00000580089 72 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 MIR4696-201ENST00000581431 70 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 MIR6507-201ENST00000613630 70 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 MIR4788-201ENST00000639104 80 ntBASIC-0.36□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-664P-201ENST00000362381 107 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 SNORD114-29-201ENST00000364819 70 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 AC244250.2-201ENST00000418731 148 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 AC114755.3-201ENST00000481111 251 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 MIR7111-201ENST00000619751 72 ntBASIC-0.37□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 RNA5SP205-201ENST00000364653 136 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 MIR539-201ENST00000365690 78 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-811P-201ENST00000384069 107 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-175P-201ENST00000516896 107 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 MIR4694-201ENST00000578534 80 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 MIR4432-201ENST00000581823 84 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-86P-201ENST00000606534 107 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 AL109933.3-201ENST00000619095 188 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 AC025521.1-201ENST00000621624 286 ntBASIC-0.38□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-832P-201ENST00000363319 107 ntBASIC-0.39□□□□□ -2.47
EXOSC3Q9NQT5 RNA5SP457-201ENST00000363657 124 ntBASIC-0.39□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.39□□□□□ -2.47
EXOSC3Q9NQT5 RNY1P5-201ENST00000383890 115 ntBASIC-0.39□□□□□ -2.47
EXOSC3Q9NQT5 MIR548A1-201ENST00000385041 97 ntBASIC-0.39□□□□□ -2.47
EXOSC3Q9NQT5 MIR4679-2-201ENST00000578358 77 ntBASIC-0.39□□□□□ -2.47
EXOSC3Q9NQT5 RNY3P2-201ENST00000362918 102 ntBASIC-0.4□□□□□ -2.47
EXOSC3Q9NQT5 MIR652-201ENST00000385278 98 ntBASIC-0.4□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-907P-201ENST00000390924 102 ntBASIC-0.4□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.4□□□□□ -2.47
EXOSC3Q9NQT5 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.4□□□□□ -2.47
EXOSC3Q9NQT5 AC068339.1-201ENST00000526965 141 ntBASIC-0.4□□□□□ -2.47
EXOSC3Q9NQT5 MIR3613-201ENST00000579844 87 ntBASIC-0.4□□□□□ -2.47
EXOSC3Q9NQT5 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.41□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-935P-201ENST00000410371 100 ntBASIC-0.41□□□□□ -2.48
EXOSC3Q9NQT5 SNORD33.1-201ENST00000516213 88 ntBASIC-0.41□□□□□ -2.48
EXOSC3Q9NQT5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.41□□□□□ -2.48
EXOSC3Q9NQT5 AP001180.6-201ENST00000584918 159 ntBASIC-0.41□□□□□ -2.48
EXOSC3Q9NQT5 MIR3914-2-201ENST00000637339 95 ntBASIC-0.41□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.42□□□□□ -2.48
EXOSC3Q9NQT5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.42□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-75P-201ENST00000515944 104 ntBASIC-0.42□□□□□ -2.48
EXOSC3Q9NQT5 MIR6779-201ENST00000617283 64 ntBASIC-0.42□□□□□ -2.48
EXOSC3Q9NQT5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.43□□□□□ -2.48
EXOSC3Q9NQT5 MIR451A-201ENST00000385059 72 ntBASIC-0.43□□□□□ -2.48
EXOSC3Q9NQT5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.43□□□□□ -2.48
EXOSC3Q9NQT5 MIR548O2-201ENST00000616090 70 ntBASIC-0.43□□□□□ -2.48
EXOSC3Q9NQT5 MIR101-1-201ENST00000362265 75 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.44□□□□□ -2.48
EXOSC3Q9NQT5 RNU6-80P-201ENST00000384195 107 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms