Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 MIR548I1-201ENST00000408810 149 ntBASIC-0.22□□□□□ -2.44
RPF1Q9H9Y2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.22□□□□□ -2.44
RPF1Q9H9Y2 AC007012.1-201ENST00000567192 175 ntBASIC-0.22□□□□□ -2.44
RPF1Q9H9Y2 MIR4679-2-201ENST00000578358 77 ntBASIC-0.22□□□□□ -2.44
RPF1Q9H9Y2 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.22□□□□□ -2.44
RPF1Q9H9Y2 MIR181B2-201ENST00000385004 89 ntBASIC-0.23□□□□□ -2.45
RPF1Q9H9Y2 snoU13.11-201ENST00000459219 104 ntBASIC-0.23□□□□□ -2.45
RPF1Q9H9Y2 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.23□□□□□ -2.45
RPF1Q9H9Y2 MIR4460-201ENST00000577862 86 ntBASIC-0.23□□□□□ -2.45
RPF1Q9H9Y2 MIR548AE1-201ENST00000583292 70 ntBASIC-0.23□□□□□ -2.45
RPF1Q9H9Y2 MIR3914-2-201ENST00000637339 95 ntBASIC-0.23□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 AC104692.1-201ENST00000472406 90 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 CR383656.4-201ENST00000546909 122 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 RN7SL660P-201ENST00000614852 299 ntBASIC-0.24□□□□□ -2.45
RPF1Q9H9Y2 RNU6-209P-201ENST00000384118 107 ntBASIC-0.25□□□□□ -2.45
RPF1Q9H9Y2 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
RPF1Q9H9Y2 SNORD33.1-201ENST00000516213 88 ntBASIC-0.25□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.25□□□□□ -2.45
RPF1Q9H9Y2 MIR4694-201ENST00000578534 80 ntBASIC-0.25□□□□□ -2.45
RPF1Q9H9Y2 MIR3613-201ENST00000579844 87 ntBASIC-0.25□□□□□ -2.45
RPF1Q9H9Y2 RNU6-832P-201ENST00000363319 107 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 RNU6-80P-201ENST00000384195 107 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 MIR548A1-201ENST00000385041 97 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 MT-TY-201ENST00000387409 66 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 RNU6-466P-201ENST00000391224 103 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 RNU7-188P-201ENST00000517063 64 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 AC068339.1-201ENST00000526965 141 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 MIR4696-201ENST00000581431 70 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 AC096720.1-201ENST00000604441 183 ntBASIC-0.26□□□□□ -2.45
RPF1Q9H9Y2 SNORD114-31-201ENST00000363219 75 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 AC109327.2-201ENST00000448339 378 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 RNU6-659P-201ENST00000516454 104 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 AC025521.1-201ENST00000621624 286 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 uc_338.10-201ENST00000621872 182 ntBASIC-0.27□□□□□ -2.45
RPF1Q9H9Y2 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.28□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.28□□□□□ -2.45
RPF1Q9H9Y2 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.28□□□□□ -2.45
RPF1Q9H9Y2 SNORD101-201ENST00000384027 73 ntBASIC-0.28□□□□□ -2.45
RPF1Q9H9Y2 RNU6-480P-201ENST00000384332 107 ntBASIC-0.28□□□□□ -2.45
RPF1Q9H9Y2 AL670379.3-201ENST00000605040 251 ntBASIC-0.28□□□□□ -2.45
RPF1Q9H9Y2 RNU6-86P-201ENST00000606534 107 ntBASIC-0.28□□□□□ -2.45
RPF1Q9H9Y2 MIR148A-201ENST00000362215 68 ntBASIC-0.29□□□□□ -2.46
RPF1Q9H9Y2 RNU6-664P-201ENST00000362381 107 ntBASIC-0.29□□□□□ -2.46
RPF1Q9H9Y2 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.29□□□□□ -2.46
RPF1Q9H9Y2 RNY3P2-201ENST00000362918 102 ntBASIC-0.29□□□□□ -2.46
RPF1Q9H9Y2 U8.6-201ENST00000364939 135 ntBASIC-0.29□□□□□ -2.46
RPF1Q9H9Y2 MIR3668-201ENST00000582138 75 ntBASIC-0.29□□□□□ -2.46
RPF1Q9H9Y2 MIR3133-201ENST00000583157 78 ntBASIC-0.29□□□□□ -2.46
RPF1Q9H9Y2 RNU6-774P-201ENST00000363238 107 ntBASIC-0.3□□□□□ -2.46
RPF1Q9H9Y2 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.3□□□□□ -2.46
RPF1Q9H9Y2 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
RPF1Q9H9Y2 RNU6-35P-201ENST00000384530 107 ntBASIC-0.31□□□□□ -2.46
RPF1Q9H9Y2 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.31□□□□□ -2.46
RPF1Q9H9Y2 RNU6-75P-201ENST00000515944 104 ntBASIC-0.31□□□□□ -2.46
RPF1Q9H9Y2 RNA5SP395-201ENST00000516567 118 ntBASIC-0.31□□□□□ -2.46
RPF1Q9H9Y2 MIR5009-201ENST00000578736 100 ntBASIC-0.31□□□□□ -2.46
RPF1Q9H9Y2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.32□□□□□ -2.46
RPF1Q9H9Y2 RNU6-154P-201ENST00000384306 106 ntBASIC-0.32□□□□□ -2.46
RPF1Q9H9Y2 MIR548A3-201ENST00000385297 97 ntBASIC-0.32□□□□□ -2.46
RPF1Q9H9Y2 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.32□□□□□ -2.46
RPF1Q9H9Y2 IGLVI-20-201ENST00000519296 130 ntBASIC-0.32□□□□□ -2.46
RPF1Q9H9Y2 U6.95-201ENST00000636931 70 ntBASIC-0.32□□□□□ -2.46
RPF1Q9H9Y2 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.33□□□□□ -2.46
RPF1Q9H9Y2 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.33□□□□□ -2.46
RPF1Q9H9Y2 MT-TR-201ENST00000387439 65 ntBASIC-0.33□□□□□ -2.46
RPF1Q9H9Y2 SNORD4A-201ENST00000459174 72 ntBASIC-0.33□□□□□ -2.46
RPF1Q9H9Y2 RNU6-175P-201ENST00000516896 107 ntBASIC-0.33□□□□□ -2.46
RPF1Q9H9Y2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.33□□□□□ -2.46
RPF1Q9H9Y2 MIR6507-201ENST00000613630 70 ntBASIC-0.33□□□□□ -2.46
RPF1Q9H9Y2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
RPF1Q9H9Y2 SNORA18.1-201ENST00000363418 128 ntBASIC-0.34□□□□□ -2.46
RPF1Q9H9Y2 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.34□□□□□ -2.46
RPF1Q9H9Y2 SNORD50.2-201ENST00000365465 70 ntBASIC-0.34□□□□□ -2.46
RPF1Q9H9Y2 AL513043.2-201ENST00000573941 143 ntBASIC-0.34□□□□□ -2.46
RPF1Q9H9Y2 MIR5589-201ENST00000579442 60 ntBASIC-0.34□□□□□ -2.46
RPF1Q9H9Y2 MIR4802-201ENST00000581881 80 ntBASIC-0.34□□□□□ -2.46
RPF1Q9H9Y2 RNU6-935P-201ENST00000410371 100 ntBASIC-0.35□□□□□ -2.47
RPF1Q9H9Y2 AC244250.2-201ENST00000418731 148 ntBASIC-0.35□□□□□ -2.47
RPF1Q9H9Y2 MIR4636-201ENST00000582271 80 ntBASIC-0.35□□□□□ -2.47
RPF1Q9H9Y2 MIR548O2-201ENST00000616090 70 ntBASIC-0.35□□□□□ -2.47
RPF1Q9H9Y2 SNORD114-29-201ENST00000364819 70 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 SNORD49B-201ENST00000365172 72 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 SNORD116-14-201ENST00000383894 92 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 SNORD116-17-201ENST00000383929 92 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 SNORD116-15-201ENST00000384445 92 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 SNORD116-19-201ENST00000384729 92 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 RNU7-85P-201ENST00000458851 63 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.36□□□□□ -2.47
RPF1Q9H9Y2 MIR655-201ENST00000362159 97 ntBASIC-0.37□□□□□ -2.47
RPF1Q9H9Y2 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.37□□□□□ -2.47
RPF1Q9H9Y2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.37□□□□□ -2.47
RPF1Q9H9Y2 RNU6-704P-201ENST00000364162 103 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms