Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU6-30P-201ENST00000384561 107 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 MIR181B2-201ENST00000385004 89 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 MIR501-201ENST00000390204 84 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 AC008267.6-201ENST00000441664 139 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 AC109327.2-201ENST00000448339 378 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 MIR5706-201ENST00000579841 80 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 RNU6-86P-201ENST00000606534 107 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 U6.100-201ENST00000636230 99 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 AC073869.9-201ENST00000641610 120 ntBASIC0.11□□□□□ -2.39
ZNF541Q9H0D2 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 SNORD116-21-201ENST00000384507 92 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 MIR610-201ENST00000385139 96 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 MIR643-201ENST00000385267 97 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 NAMPTP3-201ENST00000569273 224 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 MIR3910-1-201ENST00000580936 111 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 U7.6-201ENST00000610841 64 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 MIR371B-201ENST00000638082 66 ntBASIC0.1□□□□□ -2.39
ZNF541Q9H0D2 Y_RNA.78-201ENST00000362970 110 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 RNU6-509P-201ENST00000363519 107 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1244P-201ENST00000363614 108 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.163-201ENST00000363702 113 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 MIR519E-201ENST00000385075 84 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 RNU6-287P-201ENST00000516230 98 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 MIR4667-201ENST00000578933 66 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 MIR4493-201ENST00000584016 73 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
ZNF541Q9H0D2 RNA5SP368-201ENST00000364298 116 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 RNU6-652P-201ENST00000365488 107 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1014P-201ENST00000383940 103 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 RNU6-880P-201ENST00000384526 107 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 MIR548H2-201ENST00000408874 88 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 AC093423.1-201ENST00000440817 142 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.659-201ENST00000515994 113 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.660-201ENST00000516002 120 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 AC141557.1-201ENST00000540982 400 ntBASIC0.08□□□□□ -2.4
ZNF541Q9H0D2 SNORD114-31-201ENST00000363219 75 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1125P-201ENST00000363601 107 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNU1-141P-201ENST00000364623 158 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1107P-201ENST00000364817 104 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 SNORD115-44-201ENST00000365391 82 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNU6-480P-201ENST00000384332 107 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNU6-22P-201ENST00000384355 107 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 MIR617-201ENST00000385030 97 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1168P-201ENST00000390831 104 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 SNORD110-201ENST00000408189 75 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 HMGN2P22-201ENST00000427588 175 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 MIR2113-201ENST00000459007 91 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNU7-74P-201ENST00000459104 62 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 snoU13.11-201ENST00000459219 104 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 MIR548AD-201ENST00000584780 82 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 AC025521.1-201ENST00000621624 286 ntBASIC0.07□□□□□ -2.4
ZNF541Q9H0D2 RNA5SP205-201ENST00000364653 136 ntBASIC0.06□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1144P-201ENST00000384247 104 ntBASIC0.06□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.596-201ENST00000410462 109 ntBASIC0.06□□□□□ -2.4
ZNF541Q9H0D2 AC006210.1-201ENST00000424882 111 ntBASIC0.06□□□□□ -2.4
ZNF541Q9H0D2 MTRNR2L2-201ENST00000604882 87 ntBASIC0.06□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.207-201ENST00000364142 106 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 SNORA51.5-201ENST00000384126 131 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 RNU6-476P-201ENST00000384726 107 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 SNORA19.1-201ENST00000410656 129 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 RNU6-782P-201ENST00000516852 104 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 MIR4677-201ENST00000584153 80 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 MIR3925-201ENST00000584674 77 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 MIR548Z-201ENST00000584743 97 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 AP001180.6-201ENST00000584918 159 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 AC132825.6-201ENST00000638861 357 ntBASIC0.05□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.95-201ENST00000363079 95 ntBASIC0.04□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.283-201ENST00000364798 112 ntBASIC0.04□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.467-201ENST00000384297 102 ntBASIC0.04□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1117P-201ENST00000384525 104 ntBASIC0.04□□□□□ -2.4
ZNF541Q9H0D2 AL603908.1-201ENST00000406098 201 ntBASIC0.04□□□□□ -2.4
ZNF541Q9H0D2 RNU6-412P-201ENST00000516434 106 ntBASIC0.04□□□□□ -2.4
ZNF541Q9H0D2 MIR6129-201ENST00000616087 109 ntBASIC0.04□□□□□ -2.4
ZNF541Q9H0D2 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 SNORD45B-201ENST00000364617 72 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 MIR604-201ENST00000384880 94 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 RNU6-466P-201ENST00000391224 103 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 RNU6-1064P-201ENST00000410626 104 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 RNU6-75P-201ENST00000515944 104 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 AL513043.2-201ENST00000573941 143 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 MIR4696-201ENST00000581431 70 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 AC012531.4-201ENST00000616509 177 ntBASIC0.03□□□□□ -2.4
ZNF541Q9H0D2 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 Y_RNA.601-201ENST00000410500 113 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 AC104692.1-201ENST00000472406 90 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 RNU6-795P-201ENST00000516323 103 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 RNU6-62P-201ENST00000516526 102 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 MIR4777-201ENST00000583710 86 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 MIR4439-201ENST00000583746 80 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 AC108676.2-201ENST00000605225 163 ntBASIC0.02□□□□□ -2.41
ZNF541Q9H0D2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms