Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MT-TY-201ENST00000387409 66 ntBASIC-0.54□□□□□ -2.5
NDUFAF3Q9BU61 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.54□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.54□□□□□ -2.5
NDUFAF3Q9BU61 U7.2-201ENST00000607576 63 ntBASIC-0.54□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-957P-201ENST00000363652 99 ntBASIC-0.55□□□□□ -2.5
NDUFAF3Q9BU61 SNORD95.1-201ENST00000364099 68 ntBASIC-0.55□□□□□ -2.5
NDUFAF3Q9BU61 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.55□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-30P-201ENST00000384561 107 ntBASIC-0.55□□□□□ -2.5
NDUFAF3Q9BU61 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.55□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-781P-201ENST00000516377 101 ntBASIC-0.55□□□□□ -2.5
NDUFAF3Q9BU61 MIR4788-201ENST00000639104 80 ntBASIC-0.55□□□□□ -2.5
NDUFAF3Q9BU61 RNY4P6-201ENST00000363667 96 ntBASIC-0.56□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-804P-201ENST00000384286 107 ntBASIC-0.56□□□□□ -2.5
NDUFAF3Q9BU61 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.56□□□□□ -2.5
NDUFAF3Q9BU61 AL353621.2-201ENST00000605340 133 ntBASIC-0.56□□□□□ -2.5
NDUFAF3Q9BU61 MIR655-201ENST00000362159 97 ntBASIC-0.57□□□□□ -2.5
NDUFAF3Q9BU61 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.57□□□□□ -2.5
NDUFAF3Q9BU61 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.57□□□□□ -2.5
NDUFAF3Q9BU61 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.57□□□□□ -2.5
NDUFAF3Q9BU61 AL353813.1-201ENST00000440700 253 ntBASIC-0.57□□□□□ -2.5
NDUFAF3Q9BU61 MIR3144-201ENST00000579460 79 ntBASIC-0.57□□□□□ -2.5
NDUFAF3Q9BU61 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.58□□□□□ -2.5
NDUFAF3Q9BU61 RNA5SP205-201ENST00000364653 136 ntBASIC-0.58□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-466P-201ENST00000391224 103 ntBASIC-0.58□□□□□ -2.5
NDUFAF3Q9BU61 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.58□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-182P-201ENST00000516970 105 ntBASIC-0.58□□□□□ -2.5
NDUFAF3Q9BU61 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-816P-201ENST00000390914 107 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 SNORD75.1-201ENST00000408373 60 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-175P-201ENST00000516896 107 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 AL442128.1-201ENST00000615151 90 ntBASIC-0.59□□□□□ -2.5
NDUFAF3Q9BU61 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.6□□□□□ -2.5
NDUFAF3Q9BU61 MIR539-201ENST00000365690 78 ntBASIC-0.6□□□□□ -2.51
NDUFAF3Q9BU61 MIR569-201ENST00000385228 96 ntBASIC-0.6□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.6□□□□□ -2.51
NDUFAF3Q9BU61 AC025166.1-201ENST00000612411 163 ntBASIC-0.6□□□□□ -2.51
NDUFAF3Q9BU61 uc_338.36-201ENST00000622331 158 ntBASIC-0.6□□□□□ -2.51
NDUFAF3Q9BU61 MIR20A-201ENST00000362279 71 ntBASIC-0.61□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-235P-201ENST00000362644 107 ntBASIC-0.61□□□□□ -2.51
NDUFAF3Q9BU61 SNORD101-201ENST00000384027 73 ntBASIC-0.61□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.61□□□□□ -2.51
NDUFAF3Q9BU61 AC007012.1-201ENST00000567192 175 ntBASIC-0.61□□□□□ -2.51
NDUFAF3Q9BU61 SNORD14C-201ENST00000365382 88 ntBASIC-0.62□□□□□ -2.51
NDUFAF3Q9BU61 MIR216B-201ENST00000390186 82 ntBASIC-0.62□□□□□ -2.51
NDUFAF3Q9BU61 MTND5P18-201ENST00000445624 1801 ntBASIC-0.63□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-664P-201ENST00000362381 107 ntBASIC-0.63□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.63□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.63□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-480P-201ENST00000384332 107 ntBASIC-0.63□□□□□ -2.51
NDUFAF3Q9BU61 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
NDUFAF3Q9BU61 MIR4696-201ENST00000581431 70 ntBASIC-0.63□□□□□ -2.51
NDUFAF3Q9BU61 MIR652-201ENST00000385278 98 ntBASIC-0.64□□□□□ -2.51
NDUFAF3Q9BU61 RNU4-63P-201ENST00000411313 118 ntBASIC-0.64□□□□□ -2.51
NDUFAF3Q9BU61 snoU13.11-201ENST00000459219 104 ntBASIC-0.64□□□□□ -2.51
NDUFAF3Q9BU61 RNA5SP272-201ENST00000516095 111 ntBASIC-0.64□□□□□ -2.51
NDUFAF3Q9BU61 AC096720.1-201ENST00000604441 183 ntBASIC-0.64□□□□□ -2.51
NDUFAF3Q9BU61 AL590491.3-201ENST00000610731 82 ntBASIC-0.64□□□□□ -2.51
NDUFAF3Q9BU61 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
NDUFAF3Q9BU61 SNORD58C-201ENST00000365223 64 ntBASIC-0.65□□□□□ -2.51
NDUFAF3Q9BU61 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.65□□□□□ -2.51
NDUFAF3Q9BU61 RNU6-455P-201ENST00000384681 107 ntBASIC-0.65□□□□□ -2.51
NDUFAF3Q9BU61 MIR196A2-201ENST00000385189 110 ntBASIC-0.65□□□□□ -2.51
NDUFAF3Q9BU61 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.65□□□□□ -2.51
NDUFAF3Q9BU61 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.66□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.66□□□□□ -2.52
NDUFAF3Q9BU61 AC244090.1-201ENST00000441884 93 ntBASIC-0.66□□□□□ -2.52
NDUFAF3Q9BU61 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.66□□□□□ -2.52
NDUFAF3Q9BU61 RNU6-426P-201ENST00000516464 97 ntBASIC-0.67□□□□□ -2.52
NDUFAF3Q9BU61 MTND5P41-201ENST00000517498 206 ntBASIC-0.67□□□□□ -2.52
NDUFAF3Q9BU61 MIR3681-201ENST00000580089 72 ntBASIC-0.67□□□□□ -2.52
NDUFAF3Q9BU61 MIR548O2-201ENST00000616090 70 ntBASIC-0.67□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.68□□□□□ -2.52
NDUFAF3Q9BU61 SNORD114-11-201ENST00000363738 75 ntBASIC-0.68□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.68□□□□□ -2.52
NDUFAF3Q9BU61 RNU6-935P-201ENST00000410371 100 ntBASIC-0.68□□□□□ -2.52
NDUFAF3Q9BU61 RNA5SP67-201ENST00000516422 131 ntBASIC-0.68□□□□□ -2.52
NDUFAF3Q9BU61 RNA5SP66-201ENST00000517178 101 ntBASIC-0.68□□□□□ -2.52
NDUFAF3Q9BU61 AP000676.1-201ENST00000533307 52 ntBASIC-0.68□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.69□□□□□ -2.52
NDUFAF3Q9BU61 RNU6-886P-201ENST00000384319 105 ntBASIC-0.69□□□□□ -2.52
NDUFAF3Q9BU61 MT-TQ-201ENST00000387372 72 ntBASIC-0.69□□□□□ -2.52
NDUFAF3Q9BU61 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.7□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.7□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 MIR577-201ENST00000385196 96 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 RNU6-284P-201ENST00000411105 106 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 MTND4LP9-201ENST00000427694 174 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 AC114755.3-201ENST00000481111 251 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.71□□□□□ -2.52
NDUFAF3Q9BU61 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.72□□□□□ -2.52
NDUFAF3Q9BU61 MIR548AX-201ENST00000580117 73 ntBASIC-0.72□□□□□ -2.52
NDUFAF3Q9BU61 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms