Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU7-195P-201ENST00000458793 62 ntBASIC1.22□□□□□ -2.21
LRFN3Q9BTN0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
LRFN3Q9BTN0 MIR3064-201ENST00000581130 66 ntBASIC1.22□□□□□ -2.21
LRFN3Q9BTN0 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
LRFN3Q9BTN0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 RNU6-315P-201ENST00000362666 107 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 RNU6-716P-201ENST00000365621 103 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 MIR519A1-201ENST00000385257 85 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 AC092628.1-201ENST00000436250 252 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 SNORA18.5-201ENST00000516616 101 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 RNU6-765P-201ENST00000516916 99 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 SNORD92-201ENST00000585078 85 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 RNU7-10P-201ENST00000607194 63 ntBASIC1.21□□□□□ -2.22
LRFN3Q9BTN0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 MIR320A-201ENST00000385302 82 ntBASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 MIR942-201ENST00000401111 86 ntBASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 RPS26P5-201ENST00000418544 335 ntBASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 RNU7-156P-201ENST00000517214 74 ntBASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 AC104996.3-201ENST00000590718 94 ntBASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.2□□□□□ -2.22
LRFN3Q9BTN0 MIRLET7F1-201ENST00000362202 87 ntBASIC1.19□□□□□ -2.22
LRFN3Q9BTN0 SNORA63.2-201ENST00000362603 126 ntBASIC1.19□□□□□ -2.22
LRFN3Q9BTN0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.19□□□□□ -2.22
LRFN3Q9BTN0 Y_RNA.809-201ENST00000516058 95 ntBASIC1.19□□□□□ -2.22
LRFN3Q9BTN0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.19□□□□□ -2.22
LRFN3Q9BTN0 MIR4676-201ENST00000583078 72 ntBASIC1.19□□□□□ -2.22
LRFN3Q9BTN0 MIR1-1-201ENST00000362147 71 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 RNU6-369P-201ENST00000362515 102 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 Y_RNA.491-201ENST00000384417 107 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 MIR548U-201ENST00000390728 81 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 MIR889-201ENST00000401280 79 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 AL606490.4-201ENST00000423117 127 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 U7.7-201ENST00000459276 60 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 RNU6-557P-201ENST00000516842 110 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 RNU6-448P-201ENST00000517052 107 ntBASIC1.18□□□□□ -2.22
LRFN3Q9BTN0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.17□□□□□ -2.22
LRFN3Q9BTN0 AC025627.3-201ENST00000582078 182 ntBASIC1.17□□□□□ -2.22
LRFN3Q9BTN0 MIR4661-201ENST00000582720 75 ntBASIC1.17□□□□□ -2.22
LRFN3Q9BTN0 MIRLET7A1-201ENST00000362295 80 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 RNU6-161P-201ENST00000363051 106 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 RNU6-1229P-201ENST00000364295 107 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 RNU6-686P-201ENST00000364839 107 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 RNU6-364P-201ENST00000384387 107 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 AC145423.2-201ENST00000610631 239 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 MIR6513-201ENST00000621188 64 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 TRDV1-202ENST00000621643 102 ntBASIC1.16□□□□□ -2.22
LRFN3Q9BTN0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 RNU6-1094P-201ENST00000362416 104 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 RNA5SP245-201ENST00000364239 121 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 SNORD90-201ENST00000391145 111 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 MIR938-201ENST00000401216 83 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 AC097635.1-201ENST00000450678 155 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 RNU7-102P-201ENST00000458948 62 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 SNORD124-201ENST00000459577 104 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 FGF7P7-201ENST00000514120 227 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 RNU6-1108P-201ENST00000516308 104 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 AC138907.6-201ENST00000568401 126 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 AC138869.1-201ENST00000568623 124 ntBASIC1.15□□□□□ -2.23
LRFN3Q9BTN0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 MIR330-201ENST00000362196 94 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 RNU6-291P-201ENST00000384720 107 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 RNU6-535P-201ENST00000384722 107 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 MIR100-201ENST00000385259 80 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 MIR936-201ENST00000401264 98 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 MIR1197-201ENST00000408818 88 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 Y_RNA.660-201ENST00000516002 120 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 MIR4714-201ENST00000580728 77 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 MIR4804-201ENST00000581683 73 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 AC008608.1-201ENST00000603910 127 ntBASIC1.14□□□□□ -2.23
LRFN3Q9BTN0 MIR599-201ENST00000385069 95 ntBASIC1.13□□□□□ -2.23
LRFN3Q9BTN0 MIR1827-201ENST00000408549 66 ntBASIC1.13□□□□□ -2.23
LRFN3Q9BTN0 RNU7-56P-201ENST00000458744 62 ntBASIC1.13□□□□□ -2.23
LRFN3Q9BTN0 RNU6-977P-201ENST00000516411 103 ntBASIC1.13□□□□□ -2.23
LRFN3Q9BTN0 MIR3973-201ENST00000579824 107 ntBASIC1.13□□□□□ -2.23
LRFN3Q9BTN0 U6.100-201ENST00000636230 99 ntBASIC1.13□□□□□ -2.23
LRFN3Q9BTN0 VTRNA1-3-201ENST00000365645 89 ntBASIC1.12□□□□□ -2.23
LRFN3Q9BTN0 MIR520H-201ENST00000385126 88 ntBASIC1.12□□□□□ -2.23
LRFN3Q9BTN0 SNORD77.2-201ENST00000391045 68 ntBASIC1.12□□□□□ -2.23
LRFN3Q9BTN0 MIR4696-201ENST00000581431 70 ntBASIC1.12□□□□□ -2.23
LRFN3Q9BTN0 MTRNR2L2-201ENST00000604882 87 ntBASIC1.12□□□□□ -2.23
LRFN3Q9BTN0 U7.4-201ENST00000614961 63 ntBASIC1.12□□□□□ -2.23
LRFN3Q9BTN0 Y_RNA.788-201ENST00000622394 112 ntBASIC1.12□□□□□ -2.23
LRFN3Q9BTN0 RNU6-664P-201ENST00000362381 107 ntBASIC1.11□□□□□ -2.23
LRFN3Q9BTN0 Y_RNA.239-201ENST00000364444 113 ntBASIC1.11□□□□□ -2.23
LRFN3Q9BTN0 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.11□□□□□ -2.23
LRFN3Q9BTN0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 RNU6-208P-201ENST00000362431 107 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 SNORD101-201ENST00000384027 73 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 Y_RNA.565-201ENST00000384719 101 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 SNORD89-201ENST00000390981 114 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 RNU6-380P-201ENST00000410207 107 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 snoU13.17-201ENST00000458802 104 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 RNU6-1265P-201ENST00000516342 103 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.1□□□□□ -2.23
LRFN3Q9BTN0 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms